| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is yebA [H]
Identifier: 170078713
GI number: 170078713
Start: 2190845
End: 2193238
Strand: Direct
Name: yebA [H]
Synonym: SYNPCC7002_A2113
Alternate gene names: 170078713
Gene position: 2190845-2193238 (Clockwise)
Preceding gene: 170078709
Following gene: 170078715
Centisome position: 72.83
GC content: 51.67
Gene sequence:
>2394_bases ATGACATCACCCTCTTCCCAACGCCTCAAACCGAAATCCTTTGCGGATTTAGTGGCCCAATTGCGTAATTTTCCCAAACC CCAAAGCGAAGATTCCGTACTGCTGCGGGCCTTGGTACAGCTATTGGTGGTTGTCGGCATTATTGCGACGGATGTGGCTT CAGAAGGAAACATGATCTGGTTTGGCTGGCCGATCAGTGTTCTAGCGGTGCCCTTAACGCTCCTGGGGGGAGTCTGGAGT TGGCAAAACCGTCAGAAGGCGAATGTGGGGGCAAAATTTTTTATTGCCATCGGCATGTTGGGCATGCTGTTGCTCTTTTT CCGGAATCTGTATGCCAATTTAAACGATACGCGCTTGGTGCTGGCAGAGCTCCTCATTCAACTGCAAATTCTCCATAGCT TCGATTTGCCCCGCCGAAAGGATCTGGGTTATTCGATGGTGATCGGCCTTATTTTGTTGGGGGTGGCGGGCACTGTTTCT CAAACGCTAACCTTTGCGCCCTGGTTAATTCTATTTTTGGCGATCGCCCTCCCTGTTCTAGTTTTAGATTACCGTTCGCG CCTTGGCCTAGCTGGCTTGGAGACGCTCCTTTGGCCGCAGCGCTCCAGTGCCCGTAAAGGCCGCGCTGACCTCCTGAAAA ATTCTCCCCTGTCGCCCAAACGCCTGGGCGCAATTTTGGGGATTACCTTGGTATTGGGCTTGGGACTCTTTAGCATCATG CCCCGTTTTCCTGGCTATCAACTCAGCACCTTGCCTGTGAGTTTGCCCGCCGATGCCCCTGAAAATGAACGTTTTAGCCC GACTAACCTTAGCCTCGTCAATCCCGGTTACGAGAATCCTGGCGGCGAAGGAAATGAAAACGCCGATGGTGCGACCTTTG GGAATAGTCCGGGTACTGGGGCAGGCACGGGTGAAGGTAGTAGTCCCAGCGAAGGTCAAGGGGAACTCGATAAAACTCAG TATTACGGTTTCAATAGCAAAATCAACCAAAATCTCCGGGGTGAGATGGAAAAGGTGCTGGTGATGCGGGTGCGATCGCA GGCCCCTGGTTTTTGGCGCGTGATGTCCTTTGACCGTTACACAGGCCAGGGCTGGGAAGTCACCAATGCCGATGATTTGC AACTCACGGAGCGTTCCCGTTGGGCAGGACGTTTTTTCCTAACGCCTTTTATCCCCAACCCAGTGGAAAAGAAAAAAATT ATCCAGAGCTATACCGCCGTTTTGTCTTTGCCGAACATTGTCCCGGCGATGCAGTATCCGACGGAGCTTTATTTTCCCAC GGCGGAGATTGGCCAAGATCCAGAGGGAAATTTGCGATCGCCTTTGGGACTTTTAGAAGGTCTAACCTATACCGTTGTTT CTAAAGTACCCTACCGTAACCGGACGGAATTGGCGGCAGCAGGGACAGATTATCCGCCCTTTGTCACCGAGAAATATCTA GATGTCCCCCCAGAGATAAAAGCGGAGGTAAGGGCCGTTGCCGAGGAAATTCTCTCCCAGGCCAATAGCCCCATCACTTC CCCCTACGAAAAGGCTCTCTATCTCGCCCAAGGGTTGAAGCAACGCTTCCCCCAAGCCCAAGAAATTCCGTTCTTCGCAG ACGATGAAGATCTTGTTGAGGCCTTCCTGTTCAAATACAAGGGGGGCTACGCCGATCATTACGCCACAGTCCTCACAATT ATGTTGCGCTCTATTGGGATTCCGGCTCGGTTTGCAACGGGATTTGACCAGGGAGATTTTAATCCATTTACGGGCTATTA CCTCGTCCACAATACCGATGCCCACGCTGTCACAGAAGCCTATTTTCCTGGTCAGGGTTGGTTTGCGTTCAATCCACTGC CGGGTTATGAAGTTGTGCCGCCTTCCTTTGAGGATAGCGGCGCTTTTGGCGTATTGAGATCATTTTGGCGTTGGGTTGCG GGTTGGGTGCCGTCGCCGATTCTTGGCTTCTTTGAGGGGCTTTGGTTTACGACCTTGAAAATACTGGGATATGTAATTTC GCGGCTGTGGGGCTTTGTTTCCAGTGGCCTCGTTGGGGCCATTACGGGGGCGATCGCCGTTGCTGTCGCCAGCATGGGTG GTTGGTTTGTCATTAAACAAATTCGCAACTGGTTCCAACGGCGTCGCTTTGCTCGATTACCGATGATGGAACAGCTCTAC CAACAAATGCTCCTGCTGCTCCAAAACAAAGGGCACCAAAAACAACGTACCCAAACTCCTTGGGAGTTTTTGCGGACGAT TCAACCACAATATCGTCCTGAAACCTTAGAAATTTTGACGGAACTGACCGAAGCCTATGTCAACTGGCGCTACGGTGAAC AGCCTGCCAATACGGACTACCTCCGGCAGCAACTCAAACGCTTACGACGTTCCTTTTATCGAGGTCAATCTTAA
Upstream 100 bases:
>100_bases GTAGGCTGCTGTTCCGTTTTATAGCGTCAGTGGGATTTGTGCTGAATTTGAAGGATAAGGGTAGTCTAGTAGAAGGTTTT TGATTTCCGCCTACAGCACG
Downstream 100 bases:
>100_bases AACGGAGAGGGGGGGATTCGAACCCCCGACTGAGTTGCCCCAGTAACGGTTTTCGAGACCGCCGCATTCAACCACTCTGC CACCTCTCCAGGGACCTAAA
Product: transglutaminase-like domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 797; Mature: 796
Protein sequence:
>797_residues MTSPSSQRLKPKSFADLVAQLRNFPKPQSEDSVLLRALVQLLVVVGIIATDVASEGNMIWFGWPISVLAVPLTLLGGVWS WQNRQKANVGAKFFIAIGMLGMLLLFFRNLYANLNDTRLVLAELLIQLQILHSFDLPRRKDLGYSMVIGLILLGVAGTVS QTLTFAPWLILFLAIALPVLVLDYRSRLGLAGLETLLWPQRSSARKGRADLLKNSPLSPKRLGAILGITLVLGLGLFSIM PRFPGYQLSTLPVSLPADAPENERFSPTNLSLVNPGYENPGGEGNENADGATFGNSPGTGAGTGEGSSPSEGQGELDKTQ YYGFNSKINQNLRGEMEKVLVMRVRSQAPGFWRVMSFDRYTGQGWEVTNADDLQLTERSRWAGRFFLTPFIPNPVEKKKI IQSYTAVLSLPNIVPAMQYPTELYFPTAEIGQDPEGNLRSPLGLLEGLTYTVVSKVPYRNRTELAAAGTDYPPFVTEKYL DVPPEIKAEVRAVAEEILSQANSPITSPYEKALYLAQGLKQRFPQAQEIPFFADDEDLVEAFLFKYKGGYADHYATVLTI MLRSIGIPARFATGFDQGDFNPFTGYYLVHNTDAHAVTEAYFPGQGWFAFNPLPGYEVVPPSFEDSGAFGVLRSFWRWVA GWVPSPILGFFEGLWFTTLKILGYVISRLWGFVSSGLVGAITGAIAVAVASMGGWFVIKQIRNWFQRRRFARLPMMEQLY QQMLLLLQNKGHQKQRTQTPWEFLRTIQPQYRPETLEILTELTEAYVNWRYGEQPANTDYLRQQLKRLRRSFYRGQS
Sequences:
>Translated_797_residues MTSPSSQRLKPKSFADLVAQLRNFPKPQSEDSVLLRALVQLLVVVGIIATDVASEGNMIWFGWPISVLAVPLTLLGGVWS WQNRQKANVGAKFFIAIGMLGMLLLFFRNLYANLNDTRLVLAELLIQLQILHSFDLPRRKDLGYSMVIGLILLGVAGTVS QTLTFAPWLILFLAIALPVLVLDYRSRLGLAGLETLLWPQRSSARKGRADLLKNSPLSPKRLGAILGITLVLGLGLFSIM PRFPGYQLSTLPVSLPADAPENERFSPTNLSLVNPGYENPGGEGNENADGATFGNSPGTGAGTGEGSSPSEGQGELDKTQ YYGFNSKINQNLRGEMEKVLVMRVRSQAPGFWRVMSFDRYTGQGWEVTNADDLQLTERSRWAGRFFLTPFIPNPVEKKKI IQSYTAVLSLPNIVPAMQYPTELYFPTAEIGQDPEGNLRSPLGLLEGLTYTVVSKVPYRNRTELAAAGTDYPPFVTEKYL DVPPEIKAEVRAVAEEILSQANSPITSPYEKALYLAQGLKQRFPQAQEIPFFADDEDLVEAFLFKYKGGYADHYATVLTI MLRSIGIPARFATGFDQGDFNPFTGYYLVHNTDAHAVTEAYFPGQGWFAFNPLPGYEVVPPSFEDSGAFGVLRSFWRWVA GWVPSPILGFFEGLWFTTLKILGYVISRLWGFVSSGLVGAITGAIAVAVASMGGWFVIKQIRNWFQRRRFARLPMMEQLY QQMLLLLQNKGHQKQRTQTPWEFLRTIQPQYRPETLEILTELTEAYVNWRYGEQPANTDYLRQQLKRLRRSFYRGQS >Mature_796_residues TSPSSQRLKPKSFADLVAQLRNFPKPQSEDSVLLRALVQLLVVVGIIATDVASEGNMIWFGWPISVLAVPLTLLGGVWSW QNRQKANVGAKFFIAIGMLGMLLLFFRNLYANLNDTRLVLAELLIQLQILHSFDLPRRKDLGYSMVIGLILLGVAGTVSQ TLTFAPWLILFLAIALPVLVLDYRSRLGLAGLETLLWPQRSSARKGRADLLKNSPLSPKRLGAILGITLVLGLGLFSIMP RFPGYQLSTLPVSLPADAPENERFSPTNLSLVNPGYENPGGEGNENADGATFGNSPGTGAGTGEGSSPSEGQGELDKTQY YGFNSKINQNLRGEMEKVLVMRVRSQAPGFWRVMSFDRYTGQGWEVTNADDLQLTERSRWAGRFFLTPFIPNPVEKKKII QSYTAVLSLPNIVPAMQYPTELYFPTAEIGQDPEGNLRSPLGLLEGLTYTVVSKVPYRNRTELAAAGTDYPPFVTEKYLD VPPEIKAEVRAVAEEILSQANSPITSPYEKALYLAQGLKQRFPQAQEIPFFADDEDLVEAFLFKYKGGYADHYATVLTIM LRSIGIPARFATGFDQGDFNPFTGYYLVHNTDAHAVTEAYFPGQGWFAFNPLPGYEVVPPSFEDSGAFGVLRSFWRWVAG WVPSPILGFFEGLWFTTLKILGYVISRLWGFVSSGLVGAITGAIAVAVASMGGWFVIKQIRNWFQRRRFARLPMMEQLYQ QMLLLLQNKGHQKQRTQTPWEFLRTIQPQYRPETLEILTELTEAYVNWRYGEQPANTDYLRQQLKRLRRSFYRGQS
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002931 [H]
Pfam domain/function: PF01841 Transglut_core [H]
EC number: NA
Molecular weight: Translated: 89174; Mature: 89043
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPSSQRLKPKSFADLVAQLRNFPKPQSEDSVLLRALVQLLVVVGIIATDVASEGNMIW CCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE FGWPISVLAVPLTLLGGVWSWQNRQKANVGAKFFIAIGMLGMLLLFFRNLYANLNDTRLV ECCCHHHHHHHHHHHCCHHCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LAELLIQLQILHSFDLPRRKDLGYSMVIGLILLGVAGTVSQTLTFAPWLILFLAIALPVL HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLDYRSRLGLAGLETLLWPQRSSARKGRADLLKNSPLSPKRLGAILGITLVLGLGLFSIM HHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH PRFPGYQLSTLPVSLPADAPENERFSPTNLSLVNPGYENPGGEGNENADGATFGNSPGTG CCCCCCEEEECEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC AGTGEGSSPSEGQGELDKTQYYGFNSKINQNLRGEMEKVLVMRVRSQAPGFWRVMSFDRY CCCCCCCCCCCCCCCCCHHHCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCC TGQGWEVTNADDLQLTERSRWAGRFFLTPFIPNPVEKKKIIQSYTAVLSLPNIVPAMQYP CCCCCEECCCCCCCHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCC TELYFPTAEIGQDPEGNLRSPLGLLEGLTYTVVSKVPYRNRTELAAAGTDYPPFVTEKYL CCEECCCHHHCCCCCCCCCCHHHHHHCCHHHHHHHCCCCCCCHHEECCCCCCCCHHHHHC DVPPEIKAEVRAVAEEILSQANSPITSPYEKALYLAQGLKQRFPQAQEIPFFADDEDLVE CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH AFLFKYKGGYADHYATVLTIMLRSIGIPARFATGFDQGDFNPFTGYYLVHNTDAHAVTEA HHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHH YFPGQGWFAFNPLPGYEVVPPSFEDSGAFGVLRSFWRWVAGWVPSPILGFFEGLWFTTLK CCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ILGYVISRLWGFVSSGLVGAITGAIAVAVASMGGWFVIKQIRNWFQRRRFARLPMMEQLY HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHH QQMLLLLQNKGHQKQRTQTPWEFLRTIQPQYRPETLEILTELTEAYVNWRYGEQPANTDY HHHHHHHHCCCCHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHH LRQQLKRLRRSFYRGQS HHHHHHHHHHHHHCCCC >Mature Secondary Structure TSPSSQRLKPKSFADLVAQLRNFPKPQSEDSVLLRALVQLLVVVGIIATDVASEGNMIW CCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE FGWPISVLAVPLTLLGGVWSWQNRQKANVGAKFFIAIGMLGMLLLFFRNLYANLNDTRLV ECCCHHHHHHHHHHHCCHHCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LAELLIQLQILHSFDLPRRKDLGYSMVIGLILLGVAGTVSQTLTFAPWLILFLAIALPVL HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLDYRSRLGLAGLETLLWPQRSSARKGRADLLKNSPLSPKRLGAILGITLVLGLGLFSIM HHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH PRFPGYQLSTLPVSLPADAPENERFSPTNLSLVNPGYENPGGEGNENADGATFGNSPGTG CCCCCCEEEECEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC AGTGEGSSPSEGQGELDKTQYYGFNSKINQNLRGEMEKVLVMRVRSQAPGFWRVMSFDRY CCCCCCCCCCCCCCCCCHHHCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCC TGQGWEVTNADDLQLTERSRWAGRFFLTPFIPNPVEKKKIIQSYTAVLSLPNIVPAMQYP CCCCCEECCCCCCCHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCC TELYFPTAEIGQDPEGNLRSPLGLLEGLTYTVVSKVPYRNRTELAAAGTDYPPFVTEKYL CCEECCCHHHCCCCCCCCCCHHHHHHCCHHHHHHHCCCCCCCHHEECCCCCCCCHHHHHC DVPPEIKAEVRAVAEEILSQANSPITSPYEKALYLAQGLKQRFPQAQEIPFFADDEDLVE CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH AFLFKYKGGYADHYATVLTIMLRSIGIPARFATGFDQGDFNPFTGYYLVHNTDAHAVTEA HHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHH YFPGQGWFAFNPLPGYEVVPPSFEDSGAFGVLRSFWRWVAGWVPSPILGFFEGLWFTTLK CCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ILGYVISRLWGFVSSGLVGAITGAIAVAVASMGGWFVIKQIRNWFQRRRFARLPMMEQLY HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHH QQMLLLLQNKGHQKQRTQTPWEFLRTIQPQYRPETLEILTELTEAYVNWRYGEQPANTDY HHHHHHHHCCCCHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHH LRQQLKRLRRSFYRGQS HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]