| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078711
Identifier: 170078711
GI number: 170078711
Start: 2189412
End: 2189834
Strand: Reverse
Name: 170078711
Synonym: SYNPCC7002_A2110
Alternate gene names: NA
Gene position: 2189834-2189412 (Counterclockwise)
Preceding gene: 170078712
Following gene: 170078710
Centisome position: 72.8
GC content: 52.96
Gene sequence:
>423_bases ATGAATTTCCATGACCATGACAACTTAATTCGGTTTTTAAAGAACCACGAACCCTACGGGCCACCGCCACCAGGGGATCA CGAAGAAAGGCTTTTGGCACGACTCAACCAAACAGAACCGTCAAACCTGACAGCTTCGTCCCAGGGGAAATGGTGGGTTC CGACAGTGGTTGCTGCCGGGTTTGTGCTCGTGGTTGGCCATGGACAACTGCACCAGGAATTTGGGACGCTGCCGGAGGTG ATGCCGCAACAGTATTGGGGGAGAGTTGAACAACCCCAGCCACAGGCGATCGCCGGGGGAGCCGATGAAGAACTGGAGGC CTTTCTTGAAGAAAGCTGGTCTTACTCCTTTGGGGAGCACCTTTACCAGGAACAGGAACTGTCCTACGAGTACGTTGATT TTGTTGTCAATACTGATCCCTAG
Upstream 100 bases:
>100_bases TGGCTGAAATTCTTGGGATTCCGCCAGGAACGGTGAAATCTCGCCTCCACCATGCCCGACGATCGCTGCGTCAGTTTTTA GAAACCCAAGGAGTCAGTCT
Downstream 100 bases:
>100_bases TGCTTCGCAAAACATTCCTAAATTTCAACACTGGGCTAATGCCGTCTTAGCGGAATCTGTGATTAGTTTTGGAGATGAAT TTTAATCATGTTTAAAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MNFHDHDNLIRFLKNHEPYGPPPPGDHEERLLARLNQTEPSNLTASSQGKWWVPTVVAAGFVLVVGHGQLHQEFGTLPEV MPQQYWGRVEQPQPQAIAGGADEELEAFLEESWSYSFGEHLYQEQELSYEYVDFVVNTDP
Sequences:
>Translated_140_residues MNFHDHDNLIRFLKNHEPYGPPPPGDHEERLLARLNQTEPSNLTASSQGKWWVPTVVAAGFVLVVGHGQLHQEFGTLPEV MPQQYWGRVEQPQPQAIAGGADEELEAFLEESWSYSFGEHLYQEQELSYEYVDFVVNTDP >Mature_140_residues MNFHDHDNLIRFLKNHEPYGPPPPGDHEERLLARLNQTEPSNLTASSQGKWWVPTVVAAGFVLVVGHGQLHQEFGTLPEV MPQQYWGRVEQPQPQAIAGGADEELEAFLEESWSYSFGEHLYQEQELSYEYVDFVVNTDP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15991; Mature: 15991
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFHDHDNLIRFLKNHEPYGPPPPGDHEERLLARLNQTEPSNLTASSQGKWWVPTVVAAG CCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHCC FVLVVGHGQLHQEFGTLPEVMPQQYWGRVEQPQPQAIAGGADEELEAFLEESWSYSFGEH HHEEECCCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHH LYQEQELSYEYVDFVVNTDP HHHHHHCCEEHHEEEECCCC >Mature Secondary Structure MNFHDHDNLIRFLKNHEPYGPPPPGDHEERLLARLNQTEPSNLTASSQGKWWVPTVVAAG CCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHCC FVLVVGHGQLHQEFGTLPEVMPQQYWGRVEQPQPQAIAGGADEELEAFLEESWSYSFGEH HHEEECCCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHH LYQEQELSYEYVDFVVNTDP HHHHHHCCEEHHEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA