| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078710
Identifier: 170078710
GI number: 170078710
Start: 2188827
End: 2189267
Strand: Reverse
Name: 170078710
Synonym: SYNPCC7002_A2109
Alternate gene names: NA
Gene position: 2189267-2188827 (Counterclockwise)
Preceding gene: 170078711
Following gene: 170078708
Centisome position: 72.78
GC content: 54.65
Gene sequence:
>441_bases ATGGCGATCGCCGACTCAACCACGAAAGCCACCCACTTCACCGTTGCCCCAGCACCAGTCCTCATGAGCCAAGGGGATGA GCAGGAAGCAGATCTCGTTGATCGGCTTGACCTCAGTACCGCCCAGAGACAACAAATTCAGGGAATCCGCGCCAATTACC GTAGCCAAATGGGAGCCAAACGGGCAGCAATTCAACAGGCAAAAAATACCATGCGGACATTAATGCGCAATAGCACGACT ACCCGCAATCAATTAGAGGCCCAACACCGTACCATTACAAACCTGCGCCAAGATTTAGCAGACCTCCATTTCCGGCAGAT GTTAGACATTCGTGAAGTGCTCACCCCCGCCCAACGGGCAGAATTAGCGCAGCACATGGCCCAAAAACGCCAGGGCGATC GCTTCCAACGGTGGCGGAGCTGGTTTGGCTGGCGACAATAG
Upstream 100 bases:
>100_bases TCTTAGCGGAATCTGTGATTAGTTTTGGAGATGAATTTTAATCATGTTTAAAAAACAAGTATTAATGGCTTCTGCGGTGG CCCTCTCGTTGACAGGGGAA
Downstream 100 bases:
>100_bases TCAAAATTATTGAGACGAGCCTTGCACTTTGCGCCAAATTTCCCCGAACCACAACACAAAAGAGGTTCCTCCGATAATCC ATAGCCAATCGCGGCAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MAIADSTTKATHFTVAPAPVLMSQGDEQEADLVDRLDLSTAQRQQIQGIRANYRSQMGAKRAAIQQAKNTMRTLMRNSTT TRNQLEAQHRTITNLRQDLADLHFRQMLDIREVLTPAQRAELAQHMAQKRQGDRFQRWRSWFGWRQ
Sequences:
>Translated_146_residues MAIADSTTKATHFTVAPAPVLMSQGDEQEADLVDRLDLSTAQRQQIQGIRANYRSQMGAKRAAIQQAKNTMRTLMRNSTT TRNQLEAQHRTITNLRQDLADLHFRQMLDIREVLTPAQRAELAQHMAQKRQGDRFQRWRSWFGWRQ >Mature_145_residues AIADSTTKATHFTVAPAPVLMSQGDEQEADLVDRLDLSTAQRQQIQGIRANYRSQMGAKRAAIQQAKNTMRTLMRNSTTT RNQLEAQHRTITNLRQDLADLHFRQMLDIREVLTPAQRAELAQHMAQKRQGDRFQRWRSWFGWRQ
Specific function: Unknown
COG id: COG3678
COG function: function code UNTP; P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16932; Mature: 16801
Theoretical pI: Translated: 11.70; Mature: 11.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIADSTTKATHFTVAPAPVLMSQGDEQEADLVDRLDLSTAQRQQIQGIRANYRSQMGAK CCCCCCCCCCCEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAAIQQAKNTMRTLMRNSTTTRNQLEAQHRTITNLRQDLADLHFRQMLDIREVLTPAQRA HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH ELAQHMAQKRQGDRFQRWRSWFGWRQ HHHHHHHHHHCCHHHHHHHHHHCCCC >Mature Secondary Structure AIADSTTKATHFTVAPAPVLMSQGDEQEADLVDRLDLSTAQRQQIQGIRANYRSQMGAK CCCCCCCCCCEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAAIQQAKNTMRTLMRNSTTTRNQLEAQHRTITNLRQDLADLHFRQMLDIREVLTPAQRA HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH ELAQHMAQKRQGDRFQRWRSWFGWRQ HHHHHHHHHHCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA