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The map label for this gene is cpcT

Identifier: 170078696

GI number: 170078696

Start: 2170813

End: 2171412

Strand: Reverse

Name: cpcT

Synonym: SYNPCC7002_A2095

Alternate gene names: 170078696

Gene position: 2171412-2170813 (Counterclockwise)

Preceding gene: 170078698

Following gene: 170078695

Centisome position: 72.19

GC content: 53.83

Gene sequence:

>600_bases
ATGTCCCACTCTACCGATGCCCATACCCTTGCCCGCTGGATGGCAGGGGAGTTTTCTAACGAAGCCCAGGCCCTCGCCAA
TCCGCCCCTCTGGGCCCACATCAAAGTTTGTATGCGCCCCCTGCCCAATCAATTTTTCGATGGCTATGGCCTCTACCTCG
AACAGGCCTACAGCTCCGATACCTCTGCCCCCTATCGTCTGCGCCTGTTTCACATCAAACCCGTCGATGACCACATGGAA
CTGGTGCATTACAAACCCAAAGATGACGCCAAAACCAAATATATGGGCGCTGCCCGCAACCCTGCCATGATGCAGCACTT
TGACATGGCTGATCTAGACCCCATGCCCGGTTGCGACATGATCGTCACCTGGAGTGGGACGAGCTTCAAAGGCACTGTCC
AGGCCGGAAAAGGCTGCCGGGTTGTGCGTTATAACAAAGAGAGTTACCTCGATAACAGCTTTGAAATCACCGATAACGCC
TTGATCAGTATCGATCGCGGTCGTGATCCGGTCACCAATGAAATCCTCTGGGGCTCCCTGGCGGGGGCGTTTGAGTTTGA
AAAGATCAACAATTTCTCTGGGGAAGTTCAACCCCATTAA

Upstream 100 bases:

>100_bases
CCTTTTTCCTAAGCTTAGACAATCAGCCCCAAAAGCTGACCCCAATCTTTTTAGAAAATCCTTTACCAAACCATTTATCA
AATTATCAAAGCAATTTCCT

Downstream 100 bases:

>100_bases
CCTCTAAAATAAAATTCATCACAATTAGGAGAGAAGCAAAAATTATGGCGGCTAAACTAAAGAAAGGAAGCCTTGTGCGG
GTGATTAAAGAACAATTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MSHSTDAHTLARWMAGEFSNEAQALANPPLWAHIKVCMRPLPNQFFDGYGLYLEQAYSSDTSAPYRLRLFHIKPVDDHME
LVHYKPKDDAKTKYMGAARNPAMMQHFDMADLDPMPGCDMIVTWSGTSFKGTVQAGKGCRVVRYNKESYLDNSFEITDNA
LISIDRGRDPVTNEILWGSLAGAFEFEKINNFSGEVQPH

Sequences:

>Translated_199_residues
MSHSTDAHTLARWMAGEFSNEAQALANPPLWAHIKVCMRPLPNQFFDGYGLYLEQAYSSDTSAPYRLRLFHIKPVDDHME
LVHYKPKDDAKTKYMGAARNPAMMQHFDMADLDPMPGCDMIVTWSGTSFKGTVQAGKGCRVVRYNKESYLDNSFEITDNA
LISIDRGRDPVTNEILWGSLAGAFEFEKINNFSGEVQPH
>Mature_198_residues
SHSTDAHTLARWMAGEFSNEAQALANPPLWAHIKVCMRPLPNQFFDGYGLYLEQAYSSDTSAPYRLRLFHIKPVDDHMEL
VHYKPKDDAKTKYMGAARNPAMMQHFDMADLDPMPGCDMIVTWSGTSFKGTVQAGKGCRVVRYNKESYLDNSFEITDNAL
ISIDRGRDPVTNEILWGSLAGAFEFEKINNFSGEVQPH

Specific function: Attaches a phycocyanobilin (PCB) chromophore to 'Cys- 153' of the C-phycocyanin beta subunit (PhcB). It does not attach chromophore to CpcA, ApcA or ApcB, the other phycobiliproteins

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpcT/CpeT biliprotein lyase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CPCT_SYNP2 (B1XI94)

Other databases:

- EMBL:   EU364770
- EMBL:   CP000951
- RefSeq:   YP_001735334.1
- GeneID:   6055397
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A2095
- HOGENOM:   HBG709119
- OMA:   QAFENPP
- ProtClustDB:   CLSK893282
- HAMAP:   MF_01460
- InterPro:   IPR010404

Pfam domain/function: PF06206 DUF1001

EC number: NA

Molecular weight: Translated: 22484; Mature: 22352

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHSTDAHTLARWMAGEFSNEAQALANPPLWAHIKVCMRPLPNQFFDGYGLYLEQAYSSD
CCCCCHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHCCHHHCCCCCCEEHHHHCCC
TSAPYRLRLFHIKPVDDHMELVHYKPKDDAKTKYMGAARNPAMMQHFDMADLDPMPGCDM
CCCCEEEEEEEECCCCCCEEEEEECCCCCCCHHCCCCCCCCHHHHHCCCCCCCCCCCCCE
IVTWSGTSFKGTVQAGKGCRVVRYNKESYLDNSFEITDNALISIDRGRDPVTNEILWGSL
EEEECCCCEEEEEECCCCEEEEEECHHHHCCCCEEECCCEEEEEECCCCCCCHHHHHHHH
AGAFEFEKINNFSGEVQPH
CCCEEHHHHCCCCCCCCCC
>Mature Secondary Structure 
SHSTDAHTLARWMAGEFSNEAQALANPPLWAHIKVCMRPLPNQFFDGYGLYLEQAYSSD
CCCCHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHCCHHHCCCCCCEEHHHHCCC
TSAPYRLRLFHIKPVDDHMELVHYKPKDDAKTKYMGAARNPAMMQHFDMADLDPMPGCDM
CCCCEEEEEEEECCCCCCEEEEEECCCCCCCHHCCCCCCCCHHHHHCCCCCCCCCCCCCE
IVTWSGTSFKGTVQAGKGCRVVRYNKESYLDNSFEITDNALISIDRGRDPVTNEILWGSL
EEEECCCCEEEEEECCCCEEEEEECHHHHCCCCEEECCCEEEEEECCCCCCCHHHHHHHH
AGAFEFEKINNFSGEVQPH
CCCEEHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA