| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078676
Identifier: 170078676
GI number: 170078676
Start: 2154739
End: 2155500
Strand: Direct
Name: 170078676
Synonym: SYNPCC7002_A2072
Alternate gene names: NA
Gene position: 2154739-2155500 (Clockwise)
Preceding gene: 170078675
Following gene: 170078680
Centisome position: 71.63
GC content: 48.16
Gene sequence:
>762_bases ATGTCTTACTTTTTTTCCTGGTTTATCGGTTTTTGGTTCATTCTCTTTGGGGGAATGCTCCTTAAAGCAACTATTGGTCA GCAACTACGTCCTTTACTGAGCTACCGTAAGCCTCCCCTGGGCCAAATTCGCCCTGGTGAGAAAATTTATTTTCAGGGAC AATATAGCGTCGGCAAAAGTATTCTTTCTCCCTTAACAAAAACGACCTGTCTGAGATGGCAATTAATGGTGATAGAAACC CAAGGGAAACAGTCGAGACGCCTCATCGATCAAACTTCTAAAAGCACTTTTTTTGTCGCCGATCAACAACAAATCCTAGA AGTGCTCCCCCGTCAGCAACGCTCTGGCACGGCGATCGCCATCGGAAAAAGTCGAGTTGTGCTGTCGTCTCCCCAGCATG AACTGGATAACTACGTGGGCCTCGGCAAATGCCATTACCAAGTGCAGCAAAACATTTTCATGCCCCTCAAAGATCCCCAG GCGATCGCCTTTTTAGAAGCGAATCACATTAACCCCAAAGGCCCCCTAGGAAATCGTCGGGGGCTGGTTTTACGGGAATA CATTTGGGTGGCGGGGGATCCGGTTTACATTTATGGCAAGCTGATCCGGCGCGATCGCCAGCATAAAATCCTCATCCCTT GGGTGATTAGCCACCAACCCCGCGCCCGTATTGTGATTATTTTGGGGAGCTTAGGACTCATTGGTTTGAGTTTATTAATT GCAGGGATTACGGTGATTCTTCAGGGGGGGTTGCCGCTTTAG
Upstream 100 bases:
>100_bases GTTTTAAAATTTCTCTTGATGGCATTTTTCGATACTTATCCAATTTAAATAATGGCGGCTTTTTAGGCGATTTGAAAAGT AAAAGAAGCCTCTTTCAATA
Downstream 100 bases:
>100_bases GGGGAAGCTGCACCCAGAGGCTCCGGGGTACCGCCGCGAACTGGGCCATGGTTATTTCCTCTAGCAATTCTCCGTCTAAG AGTAGAGCCTGGGGCGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MSYFFSWFIGFWFILFGGMLLKATIGQQLRPLLSYRKPPLGQIRPGEKIYFQGQYSVGKSILSPLTKTTCLRWQLMVIET QGKQSRRLIDQTSKSTFFVADQQQILEVLPRQQRSGTAIAIGKSRVVLSSPQHELDNYVGLGKCHYQVQQNIFMPLKDPQ AIAFLEANHINPKGPLGNRRGLVLREYIWVAGDPVYIYGKLIRRDRQHKILIPWVISHQPRARIVIILGSLGLIGLSLLI AGITVILQGGLPL
Sequences:
>Translated_253_residues MSYFFSWFIGFWFILFGGMLLKATIGQQLRPLLSYRKPPLGQIRPGEKIYFQGQYSVGKSILSPLTKTTCLRWQLMVIET QGKQSRRLIDQTSKSTFFVADQQQILEVLPRQQRSGTAIAIGKSRVVLSSPQHELDNYVGLGKCHYQVQQNIFMPLKDPQ AIAFLEANHINPKGPLGNRRGLVLREYIWVAGDPVYIYGKLIRRDRQHKILIPWVISHQPRARIVIILGSLGLIGLSLLI AGITVILQGGLPL >Mature_252_residues SYFFSWFIGFWFILFGGMLLKATIGQQLRPLLSYRKPPLGQIRPGEKIYFQGQYSVGKSILSPLTKTTCLRWQLMVIETQ GKQSRRLIDQTSKSTFFVADQQQILEVLPRQQRSGTAIAIGKSRVVLSSPQHELDNYVGLGKCHYQVQQNIFMPLKDPQA IAFLEANHINPKGPLGNRRGLVLREYIWVAGDPVYIYGKLIRRDRQHKILIPWVISHQPRARIVIILGSLGLIGLSLLIA GITVILQGGLPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28647; Mature: 28516
Theoretical pI: Translated: 10.86; Mature: 10.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYFFSWFIGFWFILFGGMLLKATIGQQLRPLLSYRKPPLGQIRPGEKIYFQGQYSVGKS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHHH ILSPLTKTTCLRWQLMVIETQGKQSRRLIDQTSKSTFFVADQQQILEVLPRQQRSGTAIA HHHHHHHHHHEEEEEEEEECCCCHHHHHHHHCCCCEEEEECHHHHHHHCCCCCCCCCEEE IGKSRVVLSSPQHELDNYVGLGKCHYQVQQNIFMPLKDPQAIAFLEANHINPKGPLGNRR EECCEEEECCCHHHHHHCCCCCHHHHEECCCEECCCCCCCEEEEEEECCCCCCCCCCCCC GLVLREYIWVAGDPVYIYGKLIRRDRQHKILIPWVISHQPRARIVIILGSLGLIGLSLLI CEEEEEEEEECCCCEEEEEHHHHCCCCCEEEEEEEECCCCCEEEEEEECCHHHHHHHHHH AGITVILQGGLPL HHHHHHHCCCCCC >Mature Secondary Structure SYFFSWFIGFWFILFGGMLLKATIGQQLRPLLSYRKPPLGQIRPGEKIYFQGQYSVGKS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHHH ILSPLTKTTCLRWQLMVIETQGKQSRRLIDQTSKSTFFVADQQQILEVLPRQQRSGTAIA HHHHHHHHHHEEEEEEEEECCCCHHHHHHHHCCCCEEEEECHHHHHHHCCCCCCCCCEEE IGKSRVVLSSPQHELDNYVGLGKCHYQVQQNIFMPLKDPQAIAFLEANHINPKGPLGNRR EECCEEEECCCHHHHHHCCCCCHHHHEECCCEECCCCCCCEEEEEEECCCCCCCCCCCCC GLVLREYIWVAGDPVYIYGKLIRRDRQHKILIPWVISHQPRARIVIILGSLGLIGLSLLI CEEEEEEEEECCCCEEEEEHHHHCCCCCEEEEEEEECCCCCEEEEEEECCHHHHHHHHHH AGITVILQGGLPL HHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA