| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078662
Identifier: 170078662
GI number: 170078662
Start: 2141829
End: 2143244
Strand: Reverse
Name: 170078662
Synonym: SYNPCC7002_A2058
Alternate gene names: NA
Gene position: 2143244-2141829 (Counterclockwise)
Preceding gene: 170078663
Following gene: 170078661
Centisome position: 71.25
GC content: 51.41
Gene sequence:
>1416_bases ATGGTGGACTGGTCACAGACGGATTTGGAAGGGGCGATCGCCAACTTTTCAGAGATTCAAACGGAAATCAATTACCAACA CGCCCAGGATGTACTCCGCCAGGCATTGCAACATCTGGATCTCACCCAGACAGAACAACAGGGCCTAGAGGGGGAAATTG CCCAGCTTTCACAGATGCTGGATAAATTAGAACAAACCCGTCTGCAAATCGCGGCCTTTGGTTTGGTGGGACGAGGTAAA TCCTCGGTCTTAAATGCACTGTTAGGGAAAGAGGTTTTTCAGACCGGGGCCCTCCATGGTGTCACGACGGATATTCAGCA GGTACCTTGGACATTGCAGACGGAGGCGATCGCCAATAGCGAAATTCAACGGGCGACTTTTTTTCGGGAAGGTCAAGGAC GTTTAGAGTTGATCGATACCCCAGGCATTGACGAGGTGAACGGCGAAACCCGCGAACAGCTCGCTAAACTGATCGCCAAG CAAATGGATTTATTGCTGTTTGTCATCGCTGGGGATATGTCACGGGTCGAGTTTGAAGCGTTGTCCCAGCTCCGGGATGT GGGCAAGCCGATGATCTTGGTTTTTAACAAGGTAGATCAATACCCCAGCACTGACCGAGATTTGATTTACCAAACTATAT GTGATCGCCGGGTGAAAGAATTGCTCTCCCCCGCAGAAATTGTCATGGTTTCAGCGGCTCCTCTCGTCACCAAAATCACT ACCGATGCCACGGGACAACGCCACATTCTCCGAGAACGGGGCACCGCGAATGTAATTGATCTCAAGTTGAAAATTCTTGA AATCCTCGACCGGGAGGGAAAAGCCCTTTTAGCGCTCAATTCCATGCTCTTTGTGGATCGGCTCCATGGCCAACTGACCC AACGTAAACTTCTATTGCGTGCCCAGGCAGCCGATCGCCTCATTGAACGGGCGATGCTCACCAAAGCAGTTGCTGTGGCT TTAAATCCCGTGACAGTTGTGGATGTATTTAGCGGGGCGGTGGTAGATGTGGCCCTGATTATTCGTTTGGCCCAGTGGTA TGGTTTGCCCTTAAACCAACGGGAGGCGATCGCCCTCCTCCAGAAAATTGTCTTGAGTATGGGGGGGATTAGCCTTGGGG AAGTGCTGGCAAATCTTGGCCTCAGCTCCCTGAAAACCGCCCTGGGGATTAGTGCGCCACTTACGGGAGGATTATCGGTC ATGCCTTATCTTTCTGTGGCAGTGACCCAAGGGGCGATCGCCGGACTCACGACCCAAATTATCGGCAAAAGCACCCAAAC CTATTTAGCCAATGGTGGTTCCTGGGGGGACGCTGATCCGAAAGTCGTCGTTAAAAACATCATTGAATCTTTGGATCGAG ACTCTATTTTGCACCGACTACGCCAGGAACTCACGGCCAAATTACAGCCCCAGTAG
Upstream 100 bases:
>100_bases CTTCTACGAGAAATCATTTGGCGGCCAGAACAGCGTTGAAAGATGTGTTTGAATAACTGAGATTGTCCCTAGATAGTCAT GGAAAAGTTGTATTAAAGCG
Downstream 100 bases:
>100_bases AGCATCCCAGAAAATCACCGCTACCATGATTGTATCGATACATAATTTTTTAGTAAAAAATGACGAGCCAACCTCTTCCC CACTATTACGCCGTCCAGGC
Product: GTP binding protein
Products: NA
Alternate protein names: GTPase SAR1 And Related Small G Proteins; Membrane Associated GTPase; GTPase SAR1 And Related Small G Protein; GTPase SAR1-Like Protein
Number of amino acids: Translated: 471; Mature: 471
Protein sequence:
>471_residues MVDWSQTDLEGAIANFSEIQTEINYQHAQDVLRQALQHLDLTQTEQQGLEGEIAQLSQMLDKLEQTRLQIAAFGLVGRGK SSVLNALLGKEVFQTGALHGVTTDIQQVPWTLQTEAIANSEIQRATFFREGQGRLELIDTPGIDEVNGETREQLAKLIAK QMDLLLFVIAGDMSRVEFEALSQLRDVGKPMILVFNKVDQYPSTDRDLIYQTICDRRVKELLSPAEIVMVSAAPLVTKIT TDATGQRHILRERGTANVIDLKLKILEILDREGKALLALNSMLFVDRLHGQLTQRKLLLRAQAADRLIERAMLTKAVAVA LNPVTVVDVFSGAVVDVALIIRLAQWYGLPLNQREAIALLQKIVLSMGGISLGEVLANLGLSSLKTALGISAPLTGGLSV MPYLSVAVTQGAIAGLTTQIIGKSTQTYLANGGSWGDADPKVVVKNIIESLDRDSILHRLRQELTAKLQPQ
Sequences:
>Translated_471_residues MVDWSQTDLEGAIANFSEIQTEINYQHAQDVLRQALQHLDLTQTEQQGLEGEIAQLSQMLDKLEQTRLQIAAFGLVGRGK SSVLNALLGKEVFQTGALHGVTTDIQQVPWTLQTEAIANSEIQRATFFREGQGRLELIDTPGIDEVNGETREQLAKLIAK QMDLLLFVIAGDMSRVEFEALSQLRDVGKPMILVFNKVDQYPSTDRDLIYQTICDRRVKELLSPAEIVMVSAAPLVTKIT TDATGQRHILRERGTANVIDLKLKILEILDREGKALLALNSMLFVDRLHGQLTQRKLLLRAQAADRLIERAMLTKAVAVA LNPVTVVDVFSGAVVDVALIIRLAQWYGLPLNQREAIALLQKIVLSMGGISLGEVLANLGLSSLKTALGISAPLTGGLSV MPYLSVAVTQGAIAGLTTQIIGKSTQTYLANGGSWGDADPKVVVKNIIESLDRDSILHRLRQELTAKLQPQ >Mature_471_residues MVDWSQTDLEGAIANFSEIQTEINYQHAQDVLRQALQHLDLTQTEQQGLEGEIAQLSQMLDKLEQTRLQIAAFGLVGRGK SSVLNALLGKEVFQTGALHGVTTDIQQVPWTLQTEAIANSEIQRATFFREGQGRLELIDTPGIDEVNGETREQLAKLIAK QMDLLLFVIAGDMSRVEFEALSQLRDVGKPMILVFNKVDQYPSTDRDLIYQTICDRRVKELLSPAEIVMVSAAPLVTKIT TDATGQRHILRERGTANVIDLKLKILEILDREGKALLALNSMLFVDRLHGQLTQRKLLLRAQAADRLIERAMLTKAVAVA LNPVTVVDVFSGAVVDVALIIRLAQWYGLPLNQREAIALLQKIVLSMGGISLGEVLANLGLSSLKTALGISAPLTGGLSV MPYLSVAVTQGAIAGLTTQIIGKSTQTYLANGGSWGDADPKVVVKNIIESLDRDSILHRLRQELTAKLQPQ
Specific function: Unknown
COG id: COG1100
COG function: function code R; GTPase SAR1 and related small G proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51574; Mature: 51574
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDWSQTDLEGAIANFSEIQTEINYQHAQDVLRQALQHLDLTQTEQQGLEGEIAQLSQML CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHH DKLEQTRLQIAAFGLVGRGKSSVLNALLGKEVFQTGALHGVTTDIQQVPWTLQTEAIANS HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEHHHHHCC EIQRATFFREGQGRLELIDTPGIDEVNGETREQLAKLIAKQMDLLLFVIAGDMSRVEFEA HHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LSQLRDVGKPMILVFNKVDQYPSTDRDLIYQTICDRRVKELLSPAEIVMVSAAPLVTKIT HHHHHHCCCCEEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHEEEEECCCHHEEEE TDATGQRHILRERGTANVIDLKLKILEILDREGKALLALNSMLFVDRLHGQLTQRKLLLR CCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH AQAADRLIERAMLTKAVAVALNPVTVVDVFSGAVVDVALIIRLAQWYGLPLNQREAIALL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH QKIVLSMGGISLGEVLANLGLSSLKTALGISAPLTGGLSVMPYLSVAVTQGAIAGLTTQI HHHHHHHCCCCHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH IGKSTQTYLANGGSWGDADPKVVVKNIIESLDRDSILHRLRQELTAKLQPQ HCCCCHHHEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVDWSQTDLEGAIANFSEIQTEINYQHAQDVLRQALQHLDLTQTEQQGLEGEIAQLSQML CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHH DKLEQTRLQIAAFGLVGRGKSSVLNALLGKEVFQTGALHGVTTDIQQVPWTLQTEAIANS HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEHHHHHCC EIQRATFFREGQGRLELIDTPGIDEVNGETREQLAKLIAKQMDLLLFVIAGDMSRVEFEA HHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LSQLRDVGKPMILVFNKVDQYPSTDRDLIYQTICDRRVKELLSPAEIVMVSAAPLVTKIT HHHHHHCCCCEEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHEEEEECCCHHEEEE TDATGQRHILRERGTANVIDLKLKILEILDREGKALLALNSMLFVDRLHGQLTQRKLLLR CCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH AQAADRLIERAMLTKAVAVALNPVTVVDVFSGAVVDVALIIRLAQWYGLPLNQREAIALL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH QKIVLSMGGISLGEVLANLGLSSLKTALGISAPLTGGLSVMPYLSVAVTQGAIAGLTTQI HHHHHHHCCCCHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH IGKSTQTYLANGGSWGDADPKVVVKNIIESLDRDSILHRLRQELTAKLQPQ HCCCCHHHEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA