Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078662

Identifier: 170078662

GI number: 170078662

Start: 2141829

End: 2143244

Strand: Reverse

Name: 170078662

Synonym: SYNPCC7002_A2058

Alternate gene names: NA

Gene position: 2143244-2141829 (Counterclockwise)

Preceding gene: 170078663

Following gene: 170078661

Centisome position: 71.25

GC content: 51.41

Gene sequence:

>1416_bases
ATGGTGGACTGGTCACAGACGGATTTGGAAGGGGCGATCGCCAACTTTTCAGAGATTCAAACGGAAATCAATTACCAACA
CGCCCAGGATGTACTCCGCCAGGCATTGCAACATCTGGATCTCACCCAGACAGAACAACAGGGCCTAGAGGGGGAAATTG
CCCAGCTTTCACAGATGCTGGATAAATTAGAACAAACCCGTCTGCAAATCGCGGCCTTTGGTTTGGTGGGACGAGGTAAA
TCCTCGGTCTTAAATGCACTGTTAGGGAAAGAGGTTTTTCAGACCGGGGCCCTCCATGGTGTCACGACGGATATTCAGCA
GGTACCTTGGACATTGCAGACGGAGGCGATCGCCAATAGCGAAATTCAACGGGCGACTTTTTTTCGGGAAGGTCAAGGAC
GTTTAGAGTTGATCGATACCCCAGGCATTGACGAGGTGAACGGCGAAACCCGCGAACAGCTCGCTAAACTGATCGCCAAG
CAAATGGATTTATTGCTGTTTGTCATCGCTGGGGATATGTCACGGGTCGAGTTTGAAGCGTTGTCCCAGCTCCGGGATGT
GGGCAAGCCGATGATCTTGGTTTTTAACAAGGTAGATCAATACCCCAGCACTGACCGAGATTTGATTTACCAAACTATAT
GTGATCGCCGGGTGAAAGAATTGCTCTCCCCCGCAGAAATTGTCATGGTTTCAGCGGCTCCTCTCGTCACCAAAATCACT
ACCGATGCCACGGGACAACGCCACATTCTCCGAGAACGGGGCACCGCGAATGTAATTGATCTCAAGTTGAAAATTCTTGA
AATCCTCGACCGGGAGGGAAAAGCCCTTTTAGCGCTCAATTCCATGCTCTTTGTGGATCGGCTCCATGGCCAACTGACCC
AACGTAAACTTCTATTGCGTGCCCAGGCAGCCGATCGCCTCATTGAACGGGCGATGCTCACCAAAGCAGTTGCTGTGGCT
TTAAATCCCGTGACAGTTGTGGATGTATTTAGCGGGGCGGTGGTAGATGTGGCCCTGATTATTCGTTTGGCCCAGTGGTA
TGGTTTGCCCTTAAACCAACGGGAGGCGATCGCCCTCCTCCAGAAAATTGTCTTGAGTATGGGGGGGATTAGCCTTGGGG
AAGTGCTGGCAAATCTTGGCCTCAGCTCCCTGAAAACCGCCCTGGGGATTAGTGCGCCACTTACGGGAGGATTATCGGTC
ATGCCTTATCTTTCTGTGGCAGTGACCCAAGGGGCGATCGCCGGACTCACGACCCAAATTATCGGCAAAAGCACCCAAAC
CTATTTAGCCAATGGTGGTTCCTGGGGGGACGCTGATCCGAAAGTCGTCGTTAAAAACATCATTGAATCTTTGGATCGAG
ACTCTATTTTGCACCGACTACGCCAGGAACTCACGGCCAAATTACAGCCCCAGTAG

Upstream 100 bases:

>100_bases
CTTCTACGAGAAATCATTTGGCGGCCAGAACAGCGTTGAAAGATGTGTTTGAATAACTGAGATTGTCCCTAGATAGTCAT
GGAAAAGTTGTATTAAAGCG

Downstream 100 bases:

>100_bases
AGCATCCCAGAAAATCACCGCTACCATGATTGTATCGATACATAATTTTTTAGTAAAAAATGACGAGCCAACCTCTTCCC
CACTATTACGCCGTCCAGGC

Product: GTP binding protein

Products: NA

Alternate protein names: GTPase SAR1 And Related Small G Proteins; Membrane Associated GTPase; GTPase SAR1 And Related Small G Protein; GTPase SAR1-Like Protein

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MVDWSQTDLEGAIANFSEIQTEINYQHAQDVLRQALQHLDLTQTEQQGLEGEIAQLSQMLDKLEQTRLQIAAFGLVGRGK
SSVLNALLGKEVFQTGALHGVTTDIQQVPWTLQTEAIANSEIQRATFFREGQGRLELIDTPGIDEVNGETREQLAKLIAK
QMDLLLFVIAGDMSRVEFEALSQLRDVGKPMILVFNKVDQYPSTDRDLIYQTICDRRVKELLSPAEIVMVSAAPLVTKIT
TDATGQRHILRERGTANVIDLKLKILEILDREGKALLALNSMLFVDRLHGQLTQRKLLLRAQAADRLIERAMLTKAVAVA
LNPVTVVDVFSGAVVDVALIIRLAQWYGLPLNQREAIALLQKIVLSMGGISLGEVLANLGLSSLKTALGISAPLTGGLSV
MPYLSVAVTQGAIAGLTTQIIGKSTQTYLANGGSWGDADPKVVVKNIIESLDRDSILHRLRQELTAKLQPQ

Sequences:

>Translated_471_residues
MVDWSQTDLEGAIANFSEIQTEINYQHAQDVLRQALQHLDLTQTEQQGLEGEIAQLSQMLDKLEQTRLQIAAFGLVGRGK
SSVLNALLGKEVFQTGALHGVTTDIQQVPWTLQTEAIANSEIQRATFFREGQGRLELIDTPGIDEVNGETREQLAKLIAK
QMDLLLFVIAGDMSRVEFEALSQLRDVGKPMILVFNKVDQYPSTDRDLIYQTICDRRVKELLSPAEIVMVSAAPLVTKIT
TDATGQRHILRERGTANVIDLKLKILEILDREGKALLALNSMLFVDRLHGQLTQRKLLLRAQAADRLIERAMLTKAVAVA
LNPVTVVDVFSGAVVDVALIIRLAQWYGLPLNQREAIALLQKIVLSMGGISLGEVLANLGLSSLKTALGISAPLTGGLSV
MPYLSVAVTQGAIAGLTTQIIGKSTQTYLANGGSWGDADPKVVVKNIIESLDRDSILHRLRQELTAKLQPQ
>Mature_471_residues
MVDWSQTDLEGAIANFSEIQTEINYQHAQDVLRQALQHLDLTQTEQQGLEGEIAQLSQMLDKLEQTRLQIAAFGLVGRGK
SSVLNALLGKEVFQTGALHGVTTDIQQVPWTLQTEAIANSEIQRATFFREGQGRLELIDTPGIDEVNGETREQLAKLIAK
QMDLLLFVIAGDMSRVEFEALSQLRDVGKPMILVFNKVDQYPSTDRDLIYQTICDRRVKELLSPAEIVMVSAAPLVTKIT
TDATGQRHILRERGTANVIDLKLKILEILDREGKALLALNSMLFVDRLHGQLTQRKLLLRAQAADRLIERAMLTKAVAVA
LNPVTVVDVFSGAVVDVALIIRLAQWYGLPLNQREAIALLQKIVLSMGGISLGEVLANLGLSSLKTALGISAPLTGGLSV
MPYLSVAVTQGAIAGLTTQIIGKSTQTYLANGGSWGDADPKVVVKNIIESLDRDSILHRLRQELTAKLQPQ

Specific function: Unknown

COG id: COG1100

COG function: function code R; GTPase SAR1 and related small G proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51574; Mature: 51574

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDWSQTDLEGAIANFSEIQTEINYQHAQDVLRQALQHLDLTQTEQQGLEGEIAQLSQML
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHH
DKLEQTRLQIAAFGLVGRGKSSVLNALLGKEVFQTGALHGVTTDIQQVPWTLQTEAIANS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEHHHHHCC
EIQRATFFREGQGRLELIDTPGIDEVNGETREQLAKLIAKQMDLLLFVIAGDMSRVEFEA
HHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LSQLRDVGKPMILVFNKVDQYPSTDRDLIYQTICDRRVKELLSPAEIVMVSAAPLVTKIT
HHHHHHCCCCEEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHEEEEECCCHHEEEE
TDATGQRHILRERGTANVIDLKLKILEILDREGKALLALNSMLFVDRLHGQLTQRKLLLR
CCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH
AQAADRLIERAMLTKAVAVALNPVTVVDVFSGAVVDVALIIRLAQWYGLPLNQREAIALL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
QKIVLSMGGISLGEVLANLGLSSLKTALGISAPLTGGLSVMPYLSVAVTQGAIAGLTTQI
HHHHHHHCCCCHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IGKSTQTYLANGGSWGDADPKVVVKNIIESLDRDSILHRLRQELTAKLQPQ
HCCCCHHHEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVDWSQTDLEGAIANFSEIQTEINYQHAQDVLRQALQHLDLTQTEQQGLEGEIAQLSQML
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHH
DKLEQTRLQIAAFGLVGRGKSSVLNALLGKEVFQTGALHGVTTDIQQVPWTLQTEAIANS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEHHHHHCC
EIQRATFFREGQGRLELIDTPGIDEVNGETREQLAKLIAKQMDLLLFVIAGDMSRVEFEA
HHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LSQLRDVGKPMILVFNKVDQYPSTDRDLIYQTICDRRVKELLSPAEIVMVSAAPLVTKIT
HHHHHHCCCCEEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHEEEEECCCHHEEEE
TDATGQRHILRERGTANVIDLKLKILEILDREGKALLALNSMLFVDRLHGQLTQRKLLLR
CCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH
AQAADRLIERAMLTKAVAVALNPVTVVDVFSGAVVDVALIIRLAQWYGLPLNQREAIALL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
QKIVLSMGGISLGEVLANLGLSSLKTALGISAPLTGGLSVMPYLSVAVTQGAIAGLTTQI
HHHHHHHCCCCHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IGKSTQTYLANGGSWGDADPKVVVKNIIESLDRDSILHRLRQELTAKLQPQ
HCCCCHHHEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA