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The map label for this gene is yjcF [C]

Identifier: 170078630

GI number: 170078630

Start: 2107001

End: 2107909

Strand: Direct

Name: yjcF [C]

Synonym: SYNPCC7002_A2026

Alternate gene names: 170078630

Gene position: 2107001-2107909 (Clockwise)

Preceding gene: 170078629

Following gene: 170078631

Centisome position: 70.05

GC content: 53.25

Gene sequence:

>909_bases
ATGGCATCTCAACCGCTCAATATCCTCAAACAAGGCACCCTGGCATGGCTCCAATGGCGGCAAGCCCACCCCACCGTGAT
TCCTGACTTGAGCCACGCCAATCTCAGTCGCCTCAACTTGCGGGGGGTCGATCTCAGTCGCTGCAACCTGTCCCAATGCC
TCTTTGACCACAGTCGTTTAATTGCGGCCAATCTCAAACAAGCCGACTTGAGTGGTGCCCAGGGGGAATCTCTGCAGCTT
TTGGATGCCAATTTGCAGTCTGCCAACGCCAGTAATGGCCACTTTGCCAATAGTAATTTTTCGGGGGCCGATCTCAGTTT
TGCCAATTTGATCGGTGCGGACTTACGTCAATGCTGTTTGCAAGGAGTCAATTTTTACCACACAAATCTGATCGGGGCCA
ATCTCCGCTACAGCAGCCTCCTAGGGGCAAACCTCAGCCAAGCCCAACTGCATCGCGCTAATTTAAGCGAAACGAACCTG
AATGAAGTGAGTTTCAATGAAGCGGATCTCAGTCAAGCCAATTTATTCGAGGCAGAAGTCGGCAAGGGACAGCTTTATAA
AGTCAAACTTGTGGGCGCGGATTTGACCCAAGCCCACCTCCACCACAGTTACCTGTTTGGGGCAAATCTCCAGGGGGCGA
CCCTCCGTAAAACCGATGTACGCTGGAGCAATCTGGCCTATAGCAATCTGGTGGGGGCGGATCTAGAAGGGGTAAATCTC
CGGGGGGCAGATCTCAGTCATAGCGATCTAACCGGGGCGTCTTTGGTGGGGGCAAATCTGCGGGGTTGTCTGCTCCAGGG
GGCAAATCTCCAGGGTTGCAACTTAGAAAATGCTGACCTAGAAGGAGTTGCTTTGGGACGGGTCAATTTGCAGGGGGCGA
TCATGCCCGATGGCCAACGGCGTTGTTAA

Upstream 100 bases:

>100_bases
GGGACATTATTGCCGGTTCCCAGGCTGCCCTTGCGGCGATCGCCTATGCCCCTGGCCGACCCCAATCAACCCAGCGTCAA
GAATAATTCTGAAACGAACC

Downstream 100 bases:

>100_bases
ATCCGGTGTTGTCCCGCTGGGGAAAGCTGGAGCATTAAGAACTTAAGCTAGGATAAATGTAGTCCCTGCGGAGTCGAGAT
CTATGGCTGAATCTGGCGAT

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MASQPLNILKQGTLAWLQWRQAHPTVIPDLSHANLSRLNLRGVDLSRCNLSQCLFDHSRLIAANLKQADLSGAQGESLQL
LDANLQSANASNGHFANSNFSGADLSFANLIGADLRQCCLQGVNFYHTNLIGANLRYSSLLGANLSQAQLHRANLSETNL
NEVSFNEADLSQANLFEAEVGKGQLYKVKLVGADLTQAHLHHSYLFGANLQGATLRKTDVRWSNLAYSNLVGADLEGVNL
RGADLSHSDLTGASLVGANLRGCLLQGANLQGCNLENADLEGVALGRVNLQGAIMPDGQRRC

Sequences:

>Translated_302_residues
MASQPLNILKQGTLAWLQWRQAHPTVIPDLSHANLSRLNLRGVDLSRCNLSQCLFDHSRLIAANLKQADLSGAQGESLQL
LDANLQSANASNGHFANSNFSGADLSFANLIGADLRQCCLQGVNFYHTNLIGANLRYSSLLGANLSQAQLHRANLSETNL
NEVSFNEADLSQANLFEAEVGKGQLYKVKLVGADLTQAHLHHSYLFGANLQGATLRKTDVRWSNLAYSNLVGADLEGVNL
RGADLSHSDLTGASLVGANLRGCLLQGANLQGCNLENADLEGVALGRVNLQGAIMPDGQRRC
>Mature_301_residues
ASQPLNILKQGTLAWLQWRQAHPTVIPDLSHANLSRLNLRGVDLSRCNLSQCLFDHSRLIAANLKQADLSGAQGESLQLL
DANLQSANASNGHFANSNFSGADLSFANLIGADLRQCCLQGVNFYHTNLIGANLRYSSLLGANLSQAQLHRANLSETNLN
EVSFNEADLSQANLFEAEVGKGQLYKVKLVGADLTQAHLHHSYLFGANLQGATLRKTDVRWSNLAYSNLVGADLEGVNLR
GADLSHSDLTGASLVGANLRGCLLQGANLQGCNLENADLEGVALGRVNLQGAIMPDGQRRC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 7 pentapeptide repeat domains [H]

Homologues:

Organism=Homo sapiens, GI39753959, Length=170, Percent_Identity=33.5294117647059, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI221377802, Length=195, Percent_Identity=33.3333333333333, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 32407; Mature: 32276

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASQPLNILKQGTLAWLQWRQAHPTVIPDLSHANLSRLNLRGVDLSRCNLSQCLFDHSRL
CCCCCHHHHHHCCEEEHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHH
IAANLKQADLSGAQGESLQLLDANLQSANASNGHFANSNFSGADLSFANLIGADLRQCCL
EECCCCHHCCCCCCCCEEEEEECCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
QGVNFYHTNLIGANLRYSSLLGANLSQAQLHRANLSETNLNEVSFNEADLSQANLFEAEV
HCCCEEEEEEEECCCCHHHHHCCCCCHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHEEC
GKGQLYKVKLVGADLTQAHLHHSYLFGANLQGATLRKTDVRWSNLAYSNLVGADLEGVNL
CCCEEEEEEEECCCHHHHHHHHHEEECCCCCCCEEEECCCCHHHCHHHHHCCCCCCCCEE
RGADLSHSDLTGASLVGANLRGCLLQGANLQGCNLENADLEGVALGRVNLQGAIMPDGQR
ECCCCCCCCCCCHHEECCCCCCCEEECCCCCCCCCCCCCCCEEEEEEEEECEEECCCCCC
RC
CC
>Mature Secondary Structure 
ASQPLNILKQGTLAWLQWRQAHPTVIPDLSHANLSRLNLRGVDLSRCNLSQCLFDHSRL
CCCCHHHHHHCCEEEHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHH
IAANLKQADLSGAQGESLQLLDANLQSANASNGHFANSNFSGADLSFANLIGADLRQCCL
EECCCCHHCCCCCCCCEEEEEECCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
QGVNFYHTNLIGANLRYSSLLGANLSQAQLHRANLSETNLNEVSFNEADLSQANLFEAEV
HCCCEEEEEEEECCCCHHHHHCCCCCHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHEEC
GKGQLYKVKLVGADLTQAHLHHSYLFGANLQGATLRKTDVRWSNLAYSNLVGADLEGVNL
CCCEEEEEEEECCCHHHHHHHHHEEECCCCCCCEEEECCCCHHHCHHHHHCCCCCCCCEE
RGADLSHSDLTGASLVGANLRGCLLQGANLQGCNLENADLEGVALGRVNLQGAIMPDGQR
ECCCCCCCCCCCHHEECCCCCCCEEECCCCCCCCCCCCCCCEEEEEEEEECEEECCCCCC
RC
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]