Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078629

Identifier: 170078629

GI number: 170078629

Start: 2106348

End: 2106986

Strand: Direct

Name: 170078629

Synonym: SYNPCC7002_A2025

Alternate gene names: NA

Gene position: 2106348-2106986 (Clockwise)

Preceding gene: 170078628

Following gene: 170078630

Centisome position: 70.02

GC content: 53.21

Gene sequence:

>639_bases
TTGGGCATTGAACTGCGCAGCTATGTTTATCTCGATAGCCTGCAACCGCAACACGCATCCTACATTGGTACAGTCGCCCT
TGGATTTCTACCTTTACCAGGAGACTCATCCCTCTGGATTGAAGTGTCCCCAGGCATCGAAATTAACCGCATTACCGATG
TGGCCCTCAAATCCACCTCCGTGCGCCCAGGGGTACAATTCGTTGAACGTTTGTATGGGTTACTCGAAATTCACTCGCCC
CGCCAAGGAGAAACGAAAGCTGCGGGCCAAGCAATCCTCGATTCCCTTGGGGTCACGGCTAAGGATTGCCTCAAACCGGA
GGTAGTCTCTAGCCAAATTATTCGTAATATTGATGCCCACCAGGCCCAATTGGTAAACCGAAATCGACGGGGGCAAATGT
TGCTGGCGGGCCAAACCCTCTATGTCCTAGAAGTACAACCCGCAGCCTATGCTGCCCTCGCAGCTAATGAGGCGGAAAAA
TATGCCCAGATTAATATTTTGCAGGTGACGGCGGTGGGGAGTTTTGGCCGGGTCTATCTTGGGGGTGAAGAACGGGACAT
TATTGCCGGTTCCCAGGCTGCCCTTGCGGCGATCGCCTATGCCCCTGGCCGACCCCAATCAACCCAGCGTCAAGAATAA

Upstream 100 bases:

>100_bases
CTAATCGTTCTCAGCCGAAGCCCCTGGTAAAGATCCAGCAAGACCCGGAAGTGGGGTAAACTTTTAACCCAGTAAACCCA
GACAATACAGGGAGACAATC

Downstream 100 bases:

>100_bases
TTCTGAAACGAACCATGGCATCTCAACCGCTCAATATCCTCAAACAAGGCACCCTGGCATGGCTCCAATGGCGGCAAGCC
CACCCCACCGTGATTCCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: Bacterial Microcompartments Protein Family; Microcompartments Protein Family Protein

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MGIELRSYVYLDSLQPQHASYIGTVALGFLPLPGDSSLWIEVSPGIEINRITDVALKSTSVRPGVQFVERLYGLLEIHSP
RQGETKAAGQAILDSLGVTAKDCLKPEVVSSQIIRNIDAHQAQLVNRNRRGQMLLAGQTLYVLEVQPAAYAALAANEAEK
YAQINILQVTAVGSFGRVYLGGEERDIIAGSQAALAAIAYAPGRPQSTQRQE

Sequences:

>Translated_212_residues
MGIELRSYVYLDSLQPQHASYIGTVALGFLPLPGDSSLWIEVSPGIEINRITDVALKSTSVRPGVQFVERLYGLLEIHSP
RQGETKAAGQAILDSLGVTAKDCLKPEVVSSQIIRNIDAHQAQLVNRNRRGQMLLAGQTLYVLEVQPAAYAALAANEAEK
YAQINILQVTAVGSFGRVYLGGEERDIIAGSQAALAAIAYAPGRPQSTQRQE
>Mature_211_residues
GIELRSYVYLDSLQPQHASYIGTVALGFLPLPGDSSLWIEVSPGIEINRITDVALKSTSVRPGVQFVERLYGLLEIHSPR
QGETKAAGQAILDSLGVTAKDCLKPEVVSSQIIRNIDAHQAQLVNRNRRGQMLLAGQTLYVLEVQPAAYAALAANEAEKY
AQINILQVTAVGSFGRVYLGGEERDIIAGSQAALAAIAYAPGRPQSTQRQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22870; Mature: 22739

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIELRSYVYLDSLQPQHASYIGTVALGFLPLPGDSSLWIEVSPGIEINRITDVALKSTS
CCCEECEEEEECCCCCHHHHHHHHHHHEEEECCCCCEEEEEECCCEEEEEEEHEEEECCC
VRPGVQFVERLYGLLEIHSPRQGETKAAGQAILDSLGVTAKDCLKPEVVSSQIIRNIDAH
CCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCCHH
QAQLVNRNRRGQMLLAGQTLYVLEVQPAAYAALAANEAEKYAQINILQVTAVGSFGRVYL
HHHHHCCCCCCCEEEECCEEEEEEECCHHHHHHHHHHHHHHHEEEEEEEEEECCCCEEEE
GGEERDIIAGSQAALAAIAYAPGRPQSTQRQE
CCCCCEEECCCHHHEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
GIELRSYVYLDSLQPQHASYIGTVALGFLPLPGDSSLWIEVSPGIEINRITDVALKSTS
CCEECEEEEECCCCCHHHHHHHHHHHEEEECCCCCEEEEEECCCEEEEEEEHEEEECCC
VRPGVQFVERLYGLLEIHSPRQGETKAAGQAILDSLGVTAKDCLKPEVVSSQIIRNIDAH
CCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCCHH
QAQLVNRNRRGQMLLAGQTLYVLEVQPAAYAALAANEAEKYAQINILQVTAVGSFGRVYL
HHHHHCCCCCCCEEEECCEEEEEEECCHHHHHHHHHHHHHHHEEEEEEEEEECCCCEEEE
GGEERDIIAGSQAALAAIAYAPGRPQSTQRQE
CCCCCEEECCCHHHEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA