| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078629
Identifier: 170078629
GI number: 170078629
Start: 2106348
End: 2106986
Strand: Direct
Name: 170078629
Synonym: SYNPCC7002_A2025
Alternate gene names: NA
Gene position: 2106348-2106986 (Clockwise)
Preceding gene: 170078628
Following gene: 170078630
Centisome position: 70.02
GC content: 53.21
Gene sequence:
>639_bases TTGGGCATTGAACTGCGCAGCTATGTTTATCTCGATAGCCTGCAACCGCAACACGCATCCTACATTGGTACAGTCGCCCT TGGATTTCTACCTTTACCAGGAGACTCATCCCTCTGGATTGAAGTGTCCCCAGGCATCGAAATTAACCGCATTACCGATG TGGCCCTCAAATCCACCTCCGTGCGCCCAGGGGTACAATTCGTTGAACGTTTGTATGGGTTACTCGAAATTCACTCGCCC CGCCAAGGAGAAACGAAAGCTGCGGGCCAAGCAATCCTCGATTCCCTTGGGGTCACGGCTAAGGATTGCCTCAAACCGGA GGTAGTCTCTAGCCAAATTATTCGTAATATTGATGCCCACCAGGCCCAATTGGTAAACCGAAATCGACGGGGGCAAATGT TGCTGGCGGGCCAAACCCTCTATGTCCTAGAAGTACAACCCGCAGCCTATGCTGCCCTCGCAGCTAATGAGGCGGAAAAA TATGCCCAGATTAATATTTTGCAGGTGACGGCGGTGGGGAGTTTTGGCCGGGTCTATCTTGGGGGTGAAGAACGGGACAT TATTGCCGGTTCCCAGGCTGCCCTTGCGGCGATCGCCTATGCCCCTGGCCGACCCCAATCAACCCAGCGTCAAGAATAA
Upstream 100 bases:
>100_bases CTAATCGTTCTCAGCCGAAGCCCCTGGTAAAGATCCAGCAAGACCCGGAAGTGGGGTAAACTTTTAACCCAGTAAACCCA GACAATACAGGGAGACAATC
Downstream 100 bases:
>100_bases TTCTGAAACGAACCATGGCATCTCAACCGCTCAATATCCTCAAACAAGGCACCCTGGCATGGCTCCAATGGCGGCAAGCC CACCCCACCGTGATTCCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: Bacterial Microcompartments Protein Family; Microcompartments Protein Family Protein
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MGIELRSYVYLDSLQPQHASYIGTVALGFLPLPGDSSLWIEVSPGIEINRITDVALKSTSVRPGVQFVERLYGLLEIHSP RQGETKAAGQAILDSLGVTAKDCLKPEVVSSQIIRNIDAHQAQLVNRNRRGQMLLAGQTLYVLEVQPAAYAALAANEAEK YAQINILQVTAVGSFGRVYLGGEERDIIAGSQAALAAIAYAPGRPQSTQRQE
Sequences:
>Translated_212_residues MGIELRSYVYLDSLQPQHASYIGTVALGFLPLPGDSSLWIEVSPGIEINRITDVALKSTSVRPGVQFVERLYGLLEIHSP RQGETKAAGQAILDSLGVTAKDCLKPEVVSSQIIRNIDAHQAQLVNRNRRGQMLLAGQTLYVLEVQPAAYAALAANEAEK YAQINILQVTAVGSFGRVYLGGEERDIIAGSQAALAAIAYAPGRPQSTQRQE >Mature_211_residues GIELRSYVYLDSLQPQHASYIGTVALGFLPLPGDSSLWIEVSPGIEINRITDVALKSTSVRPGVQFVERLYGLLEIHSPR QGETKAAGQAILDSLGVTAKDCLKPEVVSSQIIRNIDAHQAQLVNRNRRGQMLLAGQTLYVLEVQPAAYAALAANEAEKY AQINILQVTAVGSFGRVYLGGEERDIIAGSQAALAAIAYAPGRPQSTQRQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22870; Mature: 22739
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIELRSYVYLDSLQPQHASYIGTVALGFLPLPGDSSLWIEVSPGIEINRITDVALKSTS CCCEECEEEEECCCCCHHHHHHHHHHHEEEECCCCCEEEEEECCCEEEEEEEHEEEECCC VRPGVQFVERLYGLLEIHSPRQGETKAAGQAILDSLGVTAKDCLKPEVVSSQIIRNIDAH CCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCCHH QAQLVNRNRRGQMLLAGQTLYVLEVQPAAYAALAANEAEKYAQINILQVTAVGSFGRVYL HHHHHCCCCCCCEEEECCEEEEEEECCHHHHHHHHHHHHHHHEEEEEEEEEECCCCEEEE GGEERDIIAGSQAALAAIAYAPGRPQSTQRQE CCCCCEEECCCHHHEEEEEECCCCCCCCCCCC >Mature Secondary Structure GIELRSYVYLDSLQPQHASYIGTVALGFLPLPGDSSLWIEVSPGIEINRITDVALKSTS CCEECEEEEECCCCCHHHHHHHHHHHEEEECCCCCEEEEEECCCEEEEEEEHEEEECCC VRPGVQFVERLYGLLEIHSPRQGETKAAGQAILDSLGVTAKDCLKPEVVSSQIIRNIDAH CCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCCHH QAQLVNRNRRGQMLLAGQTLYVLEVQPAAYAALAANEAEKYAQINILQVTAVGSFGRVYL HHHHHCCCCCCCEEEECCEEEEEEECCHHHHHHHHHHHHHHHEEEEEEEEEECCCCEEEE GGEERDIIAGSQAALAAIAYAPGRPQSTQRQE CCCCCEEECCCHHHEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA