Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078628

Identifier: 170078628

GI number: 170078628

Start: 2105083

End: 2106195

Strand: Direct

Name: 170078628

Synonym: SYNPCC7002_A2024

Alternate gene names: NA

Gene position: 2105083-2106195 (Clockwise)

Preceding gene: 170078627

Following gene: 170078629

Centisome position: 69.98

GC content: 52.65

Gene sequence:

>1113_bases
ATGTTTTTCTTTTTGAAGCAACTGACCAGTTGGGACCGCTGGAATCAATTCCTGGTGAGTCTCTCAATTTTGGCCTTTTT
ACCCCTCCAGTTTCCCCAGGTGATCAGCAATGCCGCCGTCATTGGTACGGGAAATCCAGCGGCGATCGCCACCCTGGGGG
TGATTCCCGTGGGCGGTTATGCGGCCGGGATTTTAGGTAATTTGTTGTTGATGAATTTCCTTGCCGGGCAACGGGAATTT
TGGGGCACCACCGTCCAAGCGGCAGGGATTGTCACCGCCGACATTGTGATCTTTCAACTGTTTCAGGTGGGTTTCATTCC
GGGGTGGTTATTTTGGCCAGCGACCCTATTTTTGGTGGTGGGGATGGTGCTGAACTACGGCCATTTTTTCATTTGCGATC
GCCCCGGTTGGCAGGATCAATTTTGGCCCCAATGGCGACGTATCTTACAGTGGCTCGGCATTGCCCTGCTCCCCGCATTG
GTTGTGCTCCAACTCCACGATGCTTTTTTGCCGAATTTCCCAGAATGGCCAGGGGGCCTTGGGGCGGCGTTTCTCTTGAG
TGGCTTGATGGTGCAACTGATCCAGCGACAAACCGTAAGCTTACCCAATTTTTTTCAATACCAAAACCGTTGGCGACGGG
GGGTAATGGCCCAGAGCACTTGGTTGAAAAGCTGGCTGCGGCGGGGCTGGCGCGGTTTAGCGGGCTGGACGGCAAACCTC
CTGTTTATGTTTAACTCCCTGGCCCAGTTTGTGAACTGCTTAATTTATCCCGATGATCTGGCGGCTCTCTCCCTCACAAC
CCAAGTGCTGTTTGTGGTGGGGAATTTATTAATGTTGTCCCGTTCCGGCACCCTCCTCATTGCCGGGAAAGACCGGATTT
GGTGTGCCAGCACCCTCTGGGATCTGTTGATGCGGGTGGGGATTTTTGCCTGCTTACTCCAGGCTGGCCTCCTCAATTTG
CCTCTATTTTGCGTATTCTGTGGGGCGATCGCCTTCTATTTAAGCTTCATTTTTTTGATGACCAAGCGAGTTTACCCAAG
CTCTTCCCTGGCAGATACCGCCATTTTTCTCCTATTCGGTCGGTCTCCCCAGTGGCAACCCATTGAAAGTTAA

Upstream 100 bases:

>100_bases
TGGATTCTTCAACAATTCAGCAAAAAATCATCATTTTTTCTGATTAGGCGATCGCCAACCATTTGTTAGGCTATTCCCGG
ACATCGCCCAAGCACCGCCT

Downstream 100 bases:

>100_bases
GCCATTGAGATGAAGTGTGGACGATCGCCCAGCGATTAAAATAACCCATGTCCTAATCGTTCTCAGCCGAAGCCCCTGGT
AAAGATCCAGCAAGACCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MFFFLKQLTSWDRWNQFLVSLSILAFLPLQFPQVISNAAVIGTGNPAAIATLGVIPVGGYAAGILGNLLLMNFLAGQREF
WGTTVQAAGIVTADIVIFQLFQVGFIPGWLFWPATLFLVVGMVLNYGHFFICDRPGWQDQFWPQWRRILQWLGIALLPAL
VVLQLHDAFLPNFPEWPGGLGAAFLLSGLMVQLIQRQTVSLPNFFQYQNRWRRGVMAQSTWLKSWLRRGWRGLAGWTANL
LFMFNSLAQFVNCLIYPDDLAALSLTTQVLFVVGNLLMLSRSGTLLIAGKDRIWCASTLWDLLMRVGIFACLLQAGLLNL
PLFCVFCGAIAFYLSFIFLMTKRVYPSSSLADTAIFLLFGRSPQWQPIES

Sequences:

>Translated_370_residues
MFFFLKQLTSWDRWNQFLVSLSILAFLPLQFPQVISNAAVIGTGNPAAIATLGVIPVGGYAAGILGNLLLMNFLAGQREF
WGTTVQAAGIVTADIVIFQLFQVGFIPGWLFWPATLFLVVGMVLNYGHFFICDRPGWQDQFWPQWRRILQWLGIALLPAL
VVLQLHDAFLPNFPEWPGGLGAAFLLSGLMVQLIQRQTVSLPNFFQYQNRWRRGVMAQSTWLKSWLRRGWRGLAGWTANL
LFMFNSLAQFVNCLIYPDDLAALSLTTQVLFVVGNLLMLSRSGTLLIAGKDRIWCASTLWDLLMRVGIFACLLQAGLLNL
PLFCVFCGAIAFYLSFIFLMTKRVYPSSSLADTAIFLLFGRSPQWQPIES
>Mature_370_residues
MFFFLKQLTSWDRWNQFLVSLSILAFLPLQFPQVISNAAVIGTGNPAAIATLGVIPVGGYAAGILGNLLLMNFLAGQREF
WGTTVQAAGIVTADIVIFQLFQVGFIPGWLFWPATLFLVVGMVLNYGHFFICDRPGWQDQFWPQWRRILQWLGIALLPAL
VVLQLHDAFLPNFPEWPGGLGAAFLLSGLMVQLIQRQTVSLPNFFQYQNRWRRGVMAQSTWLKSWLRRGWRGLAGWTANL
LFMFNSLAQFVNCLIYPDDLAALSLTTQVLFVVGNLLMLSRSGTLLIAGKDRIWCASTLWDLLMRVGIFACLLQAGLLNL
PLFCVFCGAIAFYLSFIFLMTKRVYPSSSLADTAIFLLFGRSPQWQPIES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41607; Mature: 41607

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFFLKQLTSWDRWNQFLVSLSILAFLPLQFPQVISNAAVIGTGNPAAIATLGVIPVGGY
CHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCHH
AAGILGNLLLMNFLAGQREFWGTTVQAAGIVTADIVIFQLFQVGFIPGWLFWPATLFLVV
HHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
GMVLNYGHFFICDRPGWQDQFWPQWRRILQWLGIALLPALVVLQLHDAFLPNFPEWPGGL
HHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GAAFLLSGLMVQLIQRQTVSLPNFFQYQNRWRRGVMAQSTWLKSWLRRGWRGLAGWTANL
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFMFNSLAQFVNCLIYPDDLAALSLTTQVLFVVGNLLMLSRSGTLLIAGKDRIWCASTLW
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCCEEEEECCCCEEHHHHHH
DLLMRVGIFACLLQAGLLNLPLFCVFCGAIAFYLSFIFLMTKRVYPSSSLADTAIFLLFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEEEC
RSPQWQPIES
CCCCCCCCCC
>Mature Secondary Structure
MFFFLKQLTSWDRWNQFLVSLSILAFLPLQFPQVISNAAVIGTGNPAAIATLGVIPVGGY
CHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCHH
AAGILGNLLLMNFLAGQREFWGTTVQAAGIVTADIVIFQLFQVGFIPGWLFWPATLFLVV
HHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
GMVLNYGHFFICDRPGWQDQFWPQWRRILQWLGIALLPALVVLQLHDAFLPNFPEWPGGL
HHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GAAFLLSGLMVQLIQRQTVSLPNFFQYQNRWRRGVMAQSTWLKSWLRRGWRGLAGWTANL
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFMFNSLAQFVNCLIYPDDLAALSLTTQVLFVVGNLLMLSRSGTLLIAGKDRIWCASTLW
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCCEEEEECCCCEEHHHHHH
DLLMRVGIFACLLQAGLLNLPLFCVFCGAIAFYLSFIFLMTKRVYPSSSLADTAIFLLFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEEEC
RSPQWQPIES
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA