Click here to switch to the map view.

The map label for this gene is dppA [C]

Identifier: 170078623

GI number: 170078623

Start: 2098548

End: 2100182

Strand: Reverse

Name: dppA [C]

Synonym: SYNPCC7002_A2019

Alternate gene names: 170078623

Gene position: 2100182-2098548 (Counterclockwise)

Preceding gene: 170078624

Following gene: 170078622

Centisome position: 69.82

GC content: 51.31

Gene sequence:

>1635_bases
GTGATCAGCGTCCTCAGCGACCCGAAAACCTTTAACCCGGCCCTCTCGGCAGAGTCCCCCAGTATTTTTGGCCTTACCTA
TGAAGGCTTAGTTTCAGAAAACCCCGTCACGGGGGAAACGGAGCCACGGCTTGCCGAATCCTGGGAATTTTCTGAAGACC
AACTCAGCTTGACCTTTACCCTGCGGGACAACCTGCAATGGTCTGACGGGGAACCGCTCACCGTTGATGATGTGGTCTTT
AGCTACAACCAGATTTATCTCAACGAAAAAATCCCCACCAATTCCCGTGATGGCCTCCGGGTGGGCGTTGCCGGAACTTT
GCCGACCGTGGAAAAAGTAGGCGATCGCCAGGTGAAATTCACCATCACCGAGCCCTTTGCGCCTTTCCTCAACAATACGG
CCCTGGAAATTCTGCCAGAACACGTCCTCCGCGAAAGCGTTGAGCAGACCGACAGCGAAGGCAATCCCCTCTTTTTGGGT
ACCTGGGGCGTCAGCACGCCACCACAAGATTTAGTTTCCAGTGGCCCCTACCAGTTAATTAACTATGCCGTGGGTCAGCG
CTTAATCTTCCAGCCCAACCCCTACTACTGGCAAACCCCCAAGCCCTACGTGGATCAAATCGTTTGGCAAATCGTCCCCA
ACACTGACACCACTTTGCTGCAATTTCGGTCTGGCGATTTAGATGTCACGGGGGTCAGCCCAGATTATTTTTCGCTCCTG
AAACGGGAAGAAGACCGGGGTAAATTTACCATCTACAACGGCGGGGAAGCCTACGGCACCAGTTTTATTTCCTTTAATCT
CAATACCGGGAAGCGGGACGGCAAACCCCTCGTCGATCCCATCAAGTCGAAATGGTTCAACAATCTGAAGTTTCGTCAGG
CTGTGGCTTATGGCATTGATCGACAGCGCATGGTGAACAATATTTACCGGGGTTTGGGGGAAGTGCAACATTCGCCGATT
TCGGTGCAATCTCCTTTCTATAATGATCAAATAAAAACCTACGATTATGACCCAGACAGGGCCAAGGCGCTCCTCGAAGA
AGCGGGCTTTTCCTACAACGCCCAGGGACAATTAATCGATGCCGACAATAATCCCGTGCGTTTTTCCTTGATTACCAATG
CGGGCAACAAAATTCGCGAAGCAATGGCGACTCAAATTGAGCAGGATCTCGAAGCCCTGGGAATGCAGGTGGATTACAGC
CCGATTGGTTTTAATATCCTCGTCGATAAGTTGAGCAACTCCCTCGATTGGGATTGTTTCTTGTTGGGCTTGACAGGAGG
GAATGAACCCAATGGGGGCGCGAATGTGTGGTTCCCAGAGGGGAATTTGCATATGTTTAACCAAGCGGCGCGGCCAGGCA
CTACCCCCCTGACGGATCGGCTGATCAATGACTGGGAACAGGAAATTGCGGATCTCTACATCCAAGGGGCCCAGGAGCTG
GATCTCGACAAACGCAAGGAGATTTATGCTAAAACCCAAGAACTTGCAGCGGAATATCTACCGTTTATCCATTTAGTGAA
CAATTATTCCCTCGCAGCGGTGCGTGACAAAATTGAAGGGGTACAACATTCGGCCCTGGGTGGCCCCCTCTGGAACCTAG
AAGATTTAACGATTGCGGCTGAAATTAAGGAGTAA

Upstream 100 bases:

>100_bases
ATTTGTGGCGGCGATCGCCTTTTCCTTGACTTTGCCCTCTGTCCTCACCGCCTGTAATCCCCAAGCCAGTAACGCCACCG
GGGCAGGGGACAACCAAATT

Downstream 100 bases:

>100_bases
AGATCGATGACGACCCTCACCATGCAACAAATTACCGATGCCCTCAAGGGGGCGATCGCCACCCATCAAGGGGCTGTGGA
CTACCTAGAAATTCGGGTGC

Product: putative extracellular solute-binding protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 544; Mature: 544

Protein sequence:

>544_residues
MISVLSDPKTFNPALSAESPSIFGLTYEGLVSENPVTGETEPRLAESWEFSEDQLSLTFTLRDNLQWSDGEPLTVDDVVF
SYNQIYLNEKIPTNSRDGLRVGVAGTLPTVEKVGDRQVKFTITEPFAPFLNNTALEILPEHVLRESVEQTDSEGNPLFLG
TWGVSTPPQDLVSSGPYQLINYAVGQRLIFQPNPYYWQTPKPYVDQIVWQIVPNTDTTLLQFRSGDLDVTGVSPDYFSLL
KREEDRGKFTIYNGGEAYGTSFISFNLNTGKRDGKPLVDPIKSKWFNNLKFRQAVAYGIDRQRMVNNIYRGLGEVQHSPI
SVQSPFYNDQIKTYDYDPDRAKALLEEAGFSYNAQGQLIDADNNPVRFSLITNAGNKIREAMATQIEQDLEALGMQVDYS
PIGFNILVDKLSNSLDWDCFLLGLTGGNEPNGGANVWFPEGNLHMFNQAARPGTTPLTDRLINDWEQEIADLYIQGAQEL
DLDKRKEIYAKTQELAAEYLPFIHLVNNYSLAAVRDKIEGVQHSALGGPLWNLEDLTIAAEIKE

Sequences:

>Translated_544_residues
MISVLSDPKTFNPALSAESPSIFGLTYEGLVSENPVTGETEPRLAESWEFSEDQLSLTFTLRDNLQWSDGEPLTVDDVVF
SYNQIYLNEKIPTNSRDGLRVGVAGTLPTVEKVGDRQVKFTITEPFAPFLNNTALEILPEHVLRESVEQTDSEGNPLFLG
TWGVSTPPQDLVSSGPYQLINYAVGQRLIFQPNPYYWQTPKPYVDQIVWQIVPNTDTTLLQFRSGDLDVTGVSPDYFSLL
KREEDRGKFTIYNGGEAYGTSFISFNLNTGKRDGKPLVDPIKSKWFNNLKFRQAVAYGIDRQRMVNNIYRGLGEVQHSPI
SVQSPFYNDQIKTYDYDPDRAKALLEEAGFSYNAQGQLIDADNNPVRFSLITNAGNKIREAMATQIEQDLEALGMQVDYS
PIGFNILVDKLSNSLDWDCFLLGLTGGNEPNGGANVWFPEGNLHMFNQAARPGTTPLTDRLINDWEQEIADLYIQGAQEL
DLDKRKEIYAKTQELAAEYLPFIHLVNNYSLAAVRDKIEGVQHSALGGPLWNLEDLTIAAEIKE
>Mature_544_residues
MISVLSDPKTFNPALSAESPSIFGLTYEGLVSENPVTGETEPRLAESWEFSEDQLSLTFTLRDNLQWSDGEPLTVDDVVF
SYNQIYLNEKIPTNSRDGLRVGVAGTLPTVEKVGDRQVKFTITEPFAPFLNNTALEILPEHVLRESVEQTDSEGNPLFLG
TWGVSTPPQDLVSSGPYQLINYAVGQRLIFQPNPYYWQTPKPYVDQIVWQIVPNTDTTLLQFRSGDLDVTGVSPDYFSLL
KREEDRGKFTIYNGGEAYGTSFISFNLNTGKRDGKPLVDPIKSKWFNNLKFRQAVAYGIDRQRMVNNIYRGLGEVQHSPI
SVQSPFYNDQIKTYDYDPDRAKALLEEAGFSYNAQGQLIDADNNPVRFSLITNAGNKIREAMATQIEQDLEALGMQVDYS
PIGFNILVDKLSNSLDWDCFLLGLTGGNEPNGGANVWFPEGNLHMFNQAARPGTTPLTDRLINDWEQEIADLYIQGAQEL
DLDKRKEIYAKTQELAAEYLPFIHLVNNYSLAAVRDKIEGVQHSALGGPLWNLEDLTIAAEIKE

Specific function: Probably part of a binding-protein-dependent transport system [H]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1789966, Length=537, Percent_Identity=26.2569832402235, Blast_Score=139, Evalue=4e-34,
Organism=Escherichia coli, GI1789887, Length=386, Percent_Identity=25.3886010362694, Blast_Score=119, Evalue=5e-28,
Organism=Escherichia coli, GI1787762, Length=534, Percent_Identity=24.9063670411985, Blast_Score=119, Evalue=7e-28,
Organism=Escherichia coli, GI1787495, Length=493, Percent_Identity=23.7322515212982, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI1787551, Length=360, Percent_Identity=25.5555555555556, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI87081878, Length=475, Percent_Identity=24.8421052631579, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI1789397, Length=467, Percent_Identity=24.1970021413276, Blast_Score=85, Evalue=1e-17,

Paralogues:

None

Copy number: 660 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 61009; Mature: 61009

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISVLSDPKTFNPALSAESPSIFGLTYEGLVSENPVTGETEPRLAESWEFSEDQLSLTFT
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEE
LRDNLQWSDGEPLTVDDVVFSYNQIYLNEKIPTNSRDGLRVGVAGTLPTVEKVGDRQVKF
EECCCCCCCCCCEEHHHHHEECEEEEEECCCCCCCCCCEEEEECCCCCHHHHCCCCEEEE
TITEPFAPFLNNTALEILPEHVLRESVEQTDSEGNPLFLGTWGVSTPPQDLVSSGPYQLI
EECCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHCCCCHHHH
NYAVGQRLIFQPNPYYWQTPKPYVDQIVWQIVPNTDTTLLQFRSGDLDVTGVSPDYFSLL
HHHHCCEEEECCCCCEECCCCHHHHHHHHEECCCCCCEEEEEECCCEEEECCCHHHHHHH
KREEDRGKFTIYNGGEAYGTSFISFNLNTGKRDGKPLVDPIKSKWFNNLKFRQAVAYGID
HHHCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCC
RQRMVNNIYRGLGEVQHSPISVQSPFYNDQIKTYDYDPDRAKALLEEAGFSYNAQGQLID
HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCEEE
ADNNPVRFSLITNAGNKIREAMATQIEQDLEALGMQVDYSPIGFNILVDKLSNSLDWDCF
CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCEEECCCCCHHEEEEHHCCCCCCEEE
LLGLTGGNEPNGGANVWFPEGNLHMFNQAARPGTTPLTDRLINDWEQEIADLYIQGAQEL
EEEECCCCCCCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHC
DLDKRKEIYAKTQELAAEYLPFIHLVNNYSLAAVRDKIEGVQHSALGGPLWNLEDLTIAA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHCCCCCCCCCCEEEEE
EIKE
EECC
>Mature Secondary Structure
MISVLSDPKTFNPALSAESPSIFGLTYEGLVSENPVTGETEPRLAESWEFSEDQLSLTFT
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEE
LRDNLQWSDGEPLTVDDVVFSYNQIYLNEKIPTNSRDGLRVGVAGTLPTVEKVGDRQVKF
EECCCCCCCCCCEEHHHHHEECEEEEEECCCCCCCCCCEEEEECCCCCHHHHCCCCEEEE
TITEPFAPFLNNTALEILPEHVLRESVEQTDSEGNPLFLGTWGVSTPPQDLVSSGPYQLI
EECCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHCCCCHHHH
NYAVGQRLIFQPNPYYWQTPKPYVDQIVWQIVPNTDTTLLQFRSGDLDVTGVSPDYFSLL
HHHHCCEEEECCCCCEECCCCHHHHHHHHEECCCCCCEEEEEECCCEEEECCCHHHHHHH
KREEDRGKFTIYNGGEAYGTSFISFNLNTGKRDGKPLVDPIKSKWFNNLKFRQAVAYGID
HHHCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCC
RQRMVNNIYRGLGEVQHSPISVQSPFYNDQIKTYDYDPDRAKALLEEAGFSYNAQGQLID
HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCEEE
ADNNPVRFSLITNAGNKIREAMATQIEQDLEALGMQVDYSPIGFNILVDKLSNSLDWDCF
CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCEEECCCCCHHEEEEHHCCCCCCEEE
LLGLTGGNEPNGGANVWFPEGNLHMFNQAARPGTTPLTDRLINDWEQEIADLYIQGAQEL
EEEECCCCCCCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHC
DLDKRKEIYAKTQELAAEYLPFIHLVNNYSLAAVRDKIEGVQHSALGGPLWNLEDLTIAA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHCCCCCCCCCCEEEEE
EIKE
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]