| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078624
Identifier: 170078624
GI number: 170078624
Start: 2100328
End: 2100723
Strand: Reverse
Name: 170078624
Synonym: SYNPCC7002_A2020
Alternate gene names: NA
Gene position: 2100723-2100328 (Counterclockwise)
Preceding gene: 170078625
Following gene: 170078623
Centisome position: 69.84
GC content: 50.25
Gene sequence:
>396_bases ATGTTGCGTGAATTTTTTCCCTTTATTATTCCCATCGAAGCCAGCACGATCGCCGGCGCTTGCCTCTGGGCCTTTGCCCT CTACATTGGCATTGCTCCGTTGCGGGAAGGGATCTTGAATGGTCTGGAACGCTGGATGAATTGGGCCGAGCGATCGCTCT ATTTTTCCGAAGAAGAATTTGAGAAGGACAAAGAAATTCGTGAATCCAAGAGTGCTTTTTCGGCCTCGCTCTTGAGCATT GTGCCTTTTTTATTATTTGGCGCAGGGTGTAATTTTGGGGTGGAGTGGAGCCTCGGTCACAGTTGGGCAATCAGTTTGGG GGTGATGGCCTGTGCTGGCTGTGGGGTGTATGAACTAGGGCGTTTAGATGGGGCGCAGCGCAATGAAGAAGAATAA
Upstream 100 bases:
>100_bases AAGGCGATCGCCATTGCCGCAACAGATGATGGGGGGAGGATGCCGAAGGCCACCACAATCGATACAATCTTTAAACACAG TTGTCGCCCTTACTCTCCCC
Downstream 100 bases:
>100_bases ATTCTTGAAACTTTCTAAATTATTTCGGTTACAGCGGTTTTGGGCATTTGTGGCGGCGATCGCCTTTTCCTTGACTTTGC CCTCTGTCCTCACCGCCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MLREFFPFIIPIEASTIAGACLWAFALYIGIAPLREGILNGLERWMNWAERSLYFSEEEFEKDKEIRESKSAFSASLLSI VPFLLFGAGCNFGVEWSLGHSWAISLGVMACAGCGVYELGRLDGAQRNEEE
Sequences:
>Translated_131_residues MLREFFPFIIPIEASTIAGACLWAFALYIGIAPLREGILNGLERWMNWAERSLYFSEEEFEKDKEIRESKSAFSASLLSI VPFLLFGAGCNFGVEWSLGHSWAISLGVMACAGCGVYELGRLDGAQRNEEE >Mature_131_residues MLREFFPFIIPIEASTIAGACLWAFALYIGIAPLREGILNGLERWMNWAERSLYFSEEEFEKDKEIRESKSAFSASLLSI VPFLLFGAGCNFGVEWSLGHSWAISLGVMACAGCGVYELGRLDGAQRNEEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14622; Mature: 14622
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLREFFPFIIPIEASTIAGACLWAFALYIGIAPLREGILNGLERWMNWAERSLYFSEEEF CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH EKDKEIRESKSAFSASLLSIVPFLLFGAGCNFGVEWSLGHSWAISLGVMACAGCGVYELG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHCCCHHHHH RLDGAQRNEEE HCCCCCCCCCC >Mature Secondary Structure MLREFFPFIIPIEASTIAGACLWAFALYIGIAPLREGILNGLERWMNWAERSLYFSEEEF CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH EKDKEIRESKSAFSASLLSIVPFLLFGAGCNFGVEWSLGHSWAISLGVMACAGCGVYELG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHCCCHHHHH RLDGAQRNEEE HCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA