| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is hisB [H]
Identifier: 170078589
GI number: 170078589
Start: 2068680
End: 2069291
Strand: Reverse
Name: hisB [H]
Synonym: SYNPCC7002_A1985
Alternate gene names: 170078589
Gene position: 2069291-2068680 (Counterclockwise)
Preceding gene: 170078593
Following gene: 170078588
Centisome position: 68.79
GC content: 53.92
Gene sequence:
>612_bases ATGATGCCTGCTTCTTCTGAGTCCCCCCGGATTGCGACCGTTGCCCGGGTGACGGGTGAAACGAATGTGAAAGTAACGGT CAATCTGGATGGAACTGGCAAGTGTGAGGTGAATACTGGGGTGCCATTCCTCGATCACATGCTGCATCAGCTTTGTTCCC ATGGTCTATTGGATCTGCACATCCAGGCCCAAGGGGACTATGAGATTGACGACCACCACACCAACGAGGATGTGGGCATT ACCCTGGGGATGGCGATCGCCAAAGCCATTGGTGAGCGCAAAGGGATTCAGCGGTTTGGTCATTTTGTCGCGCCCCTCGA CGAGGCCTTAGTACAGGTCGCCTTAGATTTTTCTGGTCGGCCCCACCTCAGCTATGGTTTAGAAATCCCCACGGAACGGG TCGGCACCTACGATACCCAACTGGTGCGGGAATTTTTTGTGGCGATCGTCAACCATGTCCAAATGACGATCCACGTGCGC CAATTAGACGGTATTAATTCCCACCACATCATTGAAGCGACCTTTAAAGCCTTTGCCCGGGCGATGCGCATGGCCCTAGA AATTGACCCCCGTCGGGCGGCAACGATCCCTAGTTCTAAAGGGGTTCTTTAG
Upstream 100 bases:
>100_bases GTCCATGGTGTAGTCTGTCTCGTCTTCAGTATGGGTTTCCCTAAATGGTTTCAACCTTAAGCTAGAATAGCTTAGCGAAT TTGAACCTAGCTATATTCTA
Downstream 100 bases:
>100_bases GCTCTTTCTAAAATTTTTATTCCCAACATTTGCAAGCAGATTTTCACAGCTAAAGTGTATTGGGGCATTGCTTCGCTCCT CCCCCCTTGCGGAAAGGTTA
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD [H]
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MMPASSESPRIATVARVTGETNVKVTVNLDGTGKCEVNTGVPFLDHMLHQLCSHGLLDLHIQAQGDYEIDDHHTNEDVGI TLGMAIAKAIGERKGIQRFGHFVAPLDEALVQVALDFSGRPHLSYGLEIPTERVGTYDTQLVREFFVAIVNHVQMTIHVR QLDGINSHHIIEATFKAFARAMRMALEIDPRRAATIPSSKGVL
Sequences:
>Translated_203_residues MMPASSESPRIATVARVTGETNVKVTVNLDGTGKCEVNTGVPFLDHMLHQLCSHGLLDLHIQAQGDYEIDDHHTNEDVGI TLGMAIAKAIGERKGIQRFGHFVAPLDEALVQVALDFSGRPHLSYGLEIPTERVGTYDTQLVREFFVAIVNHVQMTIHVR QLDGINSHHIIEATFKAFARAMRMALEIDPRRAATIPSSKGVL >Mature_203_residues MMPASSESPRIATVARVTGETNVKVTVNLDGTGKCEVNTGVPFLDHMLHQLCSHGLLDLHIQAQGDYEIDDHHTNEDVGI TLGMAIAKAIGERKGIQRFGHFVAPLDEALVQVALDFSGRPHLSYGLEIPTERVGTYDTQLVREFFVAIVNHVQMTIHVR QLDGINSHHIIEATFKAFARAMRMALEIDPRRAATIPSSKGVL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=194, Percent_Identity=46.9072164948454, Blast_Score=177, Evalue=3e-46, Organism=Saccharomyces cerevisiae, GI6324776, Length=216, Percent_Identity=37.037037037037, Blast_Score=142, Evalue=3e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD [H]
EC number: =4.2.1.19 [H]
Molecular weight: Translated: 22313; Mature: 22313
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPASSESPRIATVARVTGETNVKVTVNLDGTGKCEVNTGVPFLDHMLHQLCSHGLLDLH CCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCEEEECCCCCHHHHHHHHHHHCCEEEEE IQAQGDYEIDDHHTNEDVGITLGMAIAKAIGERKGIQRFGHFVAPLDEALVQVALDFSGR EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC PHLSYGLEIPTERVGTYDTQLVREFFVAIVNHVQMTIHVRQLDGINSHHIIEATFKAFAR CCEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHH AMRMALEIDPRRAATIPSSKGVL HHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MMPASSESPRIATVARVTGETNVKVTVNLDGTGKCEVNTGVPFLDHMLHQLCSHGLLDLH CCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCEEEECCCCCHHHHHHHHHHHCCEEEEE IQAQGDYEIDDHHTNEDVGITLGMAIAKAIGERKGIQRFGHFVAPLDEALVQVALDFSGR EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC PHLSYGLEIPTERVGTYDTQLVREFFVAIVNHVQMTIHVRQLDGINSHHIIEATFKAFAR CCEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHH AMRMALEIDPRRAATIPSSKGVL HHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8391534; 11759840 [H]