| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078555
Identifier: 170078555
GI number: 170078555
Start: 2029981
End: 2030547
Strand: Direct
Name: 170078555
Synonym: SYNPCC7002_A1950
Alternate gene names: NA
Gene position: 2029981-2030547 (Clockwise)
Preceding gene: 170078554
Following gene: 170078556
Centisome position: 67.49
GC content: 51.5
Gene sequence:
>567_bases TTGCGTTCAAAATTGAAACCAAGTGAGCGTAAATTTCCCAATCATCCCATGCGTTTTCAATTTATCTATCGGGCGATCGC CCCTGTGCTTCTGGCGAGTCTATTGTTCCTGACGGCCTGTGGTGGCAATGCCCCGGTTCCCCCCCCTGACCCAAACCCTG GGGCTAATACTGAAGTCACCACCCCGGCAACGGAGACGGCCCAAACACCTCAAAAGGGCAGTGCTTTTAATCAATTTTTC CCAGCGGACAAAACCGAGGGCTATGACCGGGTCTTTACCCAAGAAAAAGAAGGTTTCGCGGAAATTAAATTAACCCTCAA CGGTACGGAAATGGCAAAAATTTCCATCTCAGATACCGCCACCAATCTCGCTGCCCGCAGTAAATTTGCTGAAGCCGAAG AAACGGTTGATGGGTTCCCCCTCGTGGCCCAGGGAGCAAATGCCCATGCGGTTTTAGTGGGCGATCGCTATCAAGTGAAA GTGATGTCCCGGGATCCTAGTTTTGGCCCCGATGAGCGCAAGGCTTGGCTCGCCAAGGTGAATCTACAGGGTTTAGCGAG TTTATAG
Upstream 100 bases:
>100_bases GTTTGCGCTCAAACTCATGACCGGACAAAAGGGCCGTCAACCCCGCATTTTGGCGTAACTTTCTTGCTAGATTATTAATT TTTCGGGAGATTCTGGGAAT
Downstream 100 bases:
>100_bases GCCAATTTTTTGTAAACCACAGCCGTAATTTTCTATTGACTAAATTAGGAGGTTTTTCATGAGTGCTTCGATTGTGGAGT TGATGGATCAGTTACCCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MRSKLKPSERKFPNHPMRFQFIYRAIAPVLLASLLFLTACGGNAPVPPPDPNPGANTEVTTPATETAQTPQKGSAFNQFF PADKTEGYDRVFTQEKEGFAEIKLTLNGTEMAKISISDTATNLAARSKFAEAEETVDGFPLVAQGANAHAVLVGDRYQVK VMSRDPSFGPDERKAWLAKVNLQGLASL
Sequences:
>Translated_188_residues MRSKLKPSERKFPNHPMRFQFIYRAIAPVLLASLLFLTACGGNAPVPPPDPNPGANTEVTTPATETAQTPQKGSAFNQFF PADKTEGYDRVFTQEKEGFAEIKLTLNGTEMAKISISDTATNLAARSKFAEAEETVDGFPLVAQGANAHAVLVGDRYQVK VMSRDPSFGPDERKAWLAKVNLQGLASL >Mature_188_residues MRSKLKPSERKFPNHPMRFQFIYRAIAPVLLASLLFLTACGGNAPVPPPDPNPGANTEVTTPATETAQTPQKGSAFNQFF PADKTEGYDRVFTQEKEGFAEIKLTLNGTEMAKISISDTATNLAARSKFAEAEETVDGFPLVAQGANAHAVLVGDRYQVK VMSRDPSFGPDERKAWLAKVNLQGLASL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20412; Mature: 20412
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSKLKPSERKFPNHPMRFQFIYRAIAPVLLASLLFLTACGGNAPVPPPDPNPGANTEVT CCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE TPATETAQTPQKGSAFNQFFPADKTEGYDRVFTQEKEGFAEIKLTLNGTEMAKISISDTA CCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHCCCCCEEEEEEEECCCEEEEEEECCHH TNLAARSKFAEAEETVDGFPLVAQGANAHAVLVGDRYQVKVMSRDPSFGPDERKAWLAKV HHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCEEEEEEECCCCCCCCCHHEEEEEE NLQGLASL CCHHHCCC >Mature Secondary Structure MRSKLKPSERKFPNHPMRFQFIYRAIAPVLLASLLFLTACGGNAPVPPPDPNPGANTEVT CCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE TPATETAQTPQKGSAFNQFFPADKTEGYDRVFTQEKEGFAEIKLTLNGTEMAKISISDTA CCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHCCCCCEEEEEEEECCCEEEEEEECCHH TNLAARSKFAEAEETVDGFPLVAQGANAHAVLVGDRYQVKVMSRDPSFGPDERKAWLAKV HHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCEEEEEEECCCCCCCCCHHEEEEEE NLQGLASL CCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA