Click here to switch to the map view.

The map label for this gene is ubiH [C]

Identifier: 170078554

GI number: 170078554

Start: 2028727

End: 2029938

Strand: Direct

Name: ubiH [C]

Synonym: SYNPCC7002_A1949

Alternate gene names: 170078554

Gene position: 2028727-2029938 (Clockwise)

Preceding gene: 170078553

Following gene: 170078555

Centisome position: 67.44

GC content: 54.21

Gene sequence:

>1212_bases
ATGGAAAAATCTCACCTTGGGTTTGATGTGATCATTGTCGGTGGCGGTATTGTCGGGGTCACCCTCGCGGCCTGCCTCAA
ACGGACAAATCTGCGGATTGCCATCGTGGAAGCACAACCCCTTGATGTGGTGACCCAACGGCAGCGGGCCTATGCGATGT
CCCTGCTTTCCCAGCGGCTTTTTCAGGAGTTGGGGGTTTGGGAGGTGATCGCCGCCCGTAGTGGCAAATACCGCAATATT
CAATTATCGGACGAAGATTTTTCTGGGGTCGTTAGATTCTCCCGCCAGGATCTCAAGACTGATTTTCTTGGGTTTTCGGG
GCAGCACCAAGTTGTTCTTGAAACTCTCCAGGCTTCTCTGCGGGGCTATGGCAATATCCGCTGGTTCTGTCCAGCCCAAG
TCACCGCCATTCACTACGAGTCTGAGCAGGCGATCGTGGAGTTATCTAGCGAAACCCAGGGGCAGATCAAAATTCAAGGG
GCCTTGGTAGTTGGAGCCGACGGGCCACGCTCTCTTGTGCGCCAAGGAGCCAGCATTAAAACGAGGGGTTGGAAATATTG
GCAATCCTGTGTCACCTGCGTTGTTGAACATGACGCCCCCCGCAATGATGTCGCCTTTGAACGGTTTTGGGGTACGGGGC
CGATGGGAGTTTTGCCCCTAACCGAAAATCGCTGTCAAATCGTCTGGACAAATCCCCATGCCGAAGCCCAACGCCTGAAA
GAATTACCTCCGGAAGTTTTCCTAGAATATTTAGAACAACACACCGGCCCCCAGCTCGGTCGCTTAAAATTGCTTGGCGA
TCGCCAGGTCTTTCCGGTGCAATTGATGCAAGGCGATCGTTATGTGGATCATCGTCTCGCGTTGGTGGGAGATGCGGCCC
ATTGTTGCCACCCGGTGGGGGGCCAGGGTCTCAATTTAGGCATCCGCGATGCGGCGGCCCTCGCCCAAACCTTGATCGAA
GCCCAGCAACGGGGTCAGGATCTAGGAAGTTTGGCTGTGTTGAAACGCTATGAACGGTGGCGCAAGCGTGAAAATCTGGT
AATTCTTGGCTTTACGGATTTCCTCAACCGCCTTTTTTCCAACCGCATTTGGCCTGTGGTCTGGGTGCGCCGTCTGGGGC
TGATTGTGATGGCAAAATTTAATCCCCTGCGCCTGTTTGCGCTCAAACTCATGACCGGACAAAAGGGCCGTCAACCCCGC
ATTTTGGCGTAA

Upstream 100 bases:

>100_bases
CGCCAGGGGTAGTCACGCCATAGCCTTCTCTCTCGCGAAAATGTTACCTTTTGTTTAGGACAAGCCACGTCCTACGGTCT
TTAGTTTCTCGCGCTCAGTA

Downstream 100 bases:

>100_bases
CTTTCTTGCTAGATTATTAATTTTTCGGGAGATTCTGGGAATTTGCGTTCAAAATTGAAACCAAGTGAGCGTAAATTTCC
CAATCATCCCATGCGTTTTC

Product: 2-octaprenyl-6-methoxyphenyl hydroxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MEKSHLGFDVIIVGGGIVGVTLAACLKRTNLRIAIVEAQPLDVVTQRQRAYAMSLLSQRLFQELGVWEVIAARSGKYRNI
QLSDEDFSGVVRFSRQDLKTDFLGFSGQHQVVLETLQASLRGYGNIRWFCPAQVTAIHYESEQAIVELSSETQGQIKIQG
ALVVGADGPRSLVRQGASIKTRGWKYWQSCVTCVVEHDAPRNDVAFERFWGTGPMGVLPLTENRCQIVWTNPHAEAQRLK
ELPPEVFLEYLEQHTGPQLGRLKLLGDRQVFPVQLMQGDRYVDHRLALVGDAAHCCHPVGGQGLNLGIRDAAALAQTLIE
AQQRGQDLGSLAVLKRYERWRKRENLVILGFTDFLNRLFSNRIWPVVWVRRLGLIVMAKFNPLRLFALKLMTGQKGRQPR
ILA

Sequences:

>Translated_403_residues
MEKSHLGFDVIIVGGGIVGVTLAACLKRTNLRIAIVEAQPLDVVTQRQRAYAMSLLSQRLFQELGVWEVIAARSGKYRNI
QLSDEDFSGVVRFSRQDLKTDFLGFSGQHQVVLETLQASLRGYGNIRWFCPAQVTAIHYESEQAIVELSSETQGQIKIQG
ALVVGADGPRSLVRQGASIKTRGWKYWQSCVTCVVEHDAPRNDVAFERFWGTGPMGVLPLTENRCQIVWTNPHAEAQRLK
ELPPEVFLEYLEQHTGPQLGRLKLLGDRQVFPVQLMQGDRYVDHRLALVGDAAHCCHPVGGQGLNLGIRDAAALAQTLIE
AQQRGQDLGSLAVLKRYERWRKRENLVILGFTDFLNRLFSNRIWPVVWVRRLGLIVMAKFNPLRLFALKLMTGQKGRQPR
ILA
>Mature_403_residues
MEKSHLGFDVIIVGGGIVGVTLAACLKRTNLRIAIVEAQPLDVVTQRQRAYAMSLLSQRLFQELGVWEVIAARSGKYRNI
QLSDEDFSGVVRFSRQDLKTDFLGFSGQHQVVLETLQASLRGYGNIRWFCPAQVTAIHYESEQAIVELSSETQGQIKIQG
ALVVGADGPRSLVRQGASIKTRGWKYWQSCVTCVVEHDAPRNDVAFERFWGTGPMGVLPLTENRCQIVWTNPHAEAQRLK
ELPPEVFLEYLEQHTGPQLGRLKLLGDRQVFPVQLMQGDRYVDHRLALVGDAAHCCHPVGGQGLNLGIRDAAALAQTLIE
AQQRGQDLGSLAVLKRYERWRKRENLVILGFTDFLNRLFSNRIWPVVWVRRLGLIVMAKFNPLRLFALKLMTGQKGRQPR
ILA

Specific function: Oxygenase That Introduces The Hydroxyl Group At Carbon Four Of 2-Octaprenyl-6-Methoxyphenol Resulting In The Formation Of 2-Octaprenyl-6-Methoxy-1,4-Benzoquinone. [C]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Homo sapiens, GI32967305, Length=406, Percent_Identity=29.8029556650246, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI32967307, Length=343, Percent_Identity=30.3206997084548, Blast_Score=149, Evalue=4e-36,
Organism=Escherichia coli, GI1789274, Length=383, Percent_Identity=32.8981723237598, Blast_Score=202, Evalue=3e-53,
Organism=Escherichia coli, GI1786883, Length=390, Percent_Identity=33.0769230769231, Blast_Score=191, Evalue=6e-50,
Organism=Escherichia coli, GI1789273, Length=372, Percent_Identity=32.5268817204301, Blast_Score=190, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI25146631, Length=448, Percent_Identity=25.8928571428571, Blast_Score=157, Evalue=1e-38,
Organism=Saccharomyces cerevisiae, GI6321694, Length=472, Percent_Identity=27.1186440677966, Blast_Score=133, Evalue=5e-32,
Organism=Drosophila melanogaster, GI19920760, Length=430, Percent_Identity=26.046511627907, Blast_Score=142, Evalue=5e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.14.13.-

Molecular weight: Translated: 45328; Mature: 45328

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01304 UBIH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKSHLGFDVIIVGGGIVGVTLAACLKRTNLRIAIVEAQPLDVVTQRQRAYAMSLLSQRL
CCCCCCCEEEEEECCCHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHH
FQELGVWEVIAARSGKYRNIQLSDEDFSGVVRFSRQDLKTDFLGFSGQHQVVLETLQASL
HHHCCHHHEEHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
RGYGNIRWFCPAQVTAIHYESEQAIVELSSETQGQIKIQGALVVGADGPRSLVRQGASIK
CCCCCEEEECCCEEEEEEECCCCEEEEECCCCCCEEEEEEEEEECCCCHHHHHHCCCCCC
TRGWKYWQSCVTCVVEHDAPRNDVAFERFWGTGPMGVLPLTENRCQIVWTNPHAEAQRLK
CCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCEEEEECCCCEEEEECCCCHHHHHHH
ELPPEVFLEYLEQHTGPQLGRLKLLGDRQVFPVQLMQGDRYVDHRLALVGDAAHCCHPVG
HCCHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEECCCCHHHHHEEEECCHHHHCCCCC
GQGLNLGIRDAAALAQTLIEAQQRGQDLGSLAVLKRYERWRKRENLVILGFTDFLNRLFS
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHH
NRIWPVVWVRRLGLIVMAKFNPLRLFALKLMTGQKGRQPRILA
CCCCHHHHHHHCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MEKSHLGFDVIIVGGGIVGVTLAACLKRTNLRIAIVEAQPLDVVTQRQRAYAMSLLSQRL
CCCCCCCEEEEEECCCHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHH
FQELGVWEVIAARSGKYRNIQLSDEDFSGVVRFSRQDLKTDFLGFSGQHQVVLETLQASL
HHHCCHHHEEHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
RGYGNIRWFCPAQVTAIHYESEQAIVELSSETQGQIKIQGALVVGADGPRSLVRQGASIK
CCCCCEEEECCCEEEEEEECCCCEEEEECCCCCCEEEEEEEEEECCCCHHHHHHCCCCCC
TRGWKYWQSCVTCVVEHDAPRNDVAFERFWGTGPMGVLPLTENRCQIVWTNPHAEAQRLK
CCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCEEEEECCCCEEEEECCCCHHHHHHH
ELPPEVFLEYLEQHTGPQLGRLKLLGDRQVFPVQLMQGDRYVDHRLALVGDAAHCCHPVG
HCCHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEECCCCHHHHHEEEECCHHHHCCCCC
GQGLNLGIRDAAALAQTLIEAQQRGQDLGSLAVLKRYERWRKRENLVILGFTDFLNRLFS
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHH
NRIWPVVWVRRLGLIVMAKFNPLRLFALKLMTGQKGRQPRILA
CCCCHHHHHHHCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]