Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078551

Identifier: 170078551

GI number: 170078551

Start: 2026811

End: 2027407

Strand: Direct

Name: 170078551

Synonym: SYNPCC7002_A1946

Alternate gene names: NA

Gene position: 2026811-2027407 (Clockwise)

Preceding gene: 170078550

Following gene: 170078552

Centisome position: 67.38

GC content: 51.26

Gene sequence:

>597_bases
ATGACCGACGAACAGCTCAAGCTTTTTTCTGTGGCCGATGCCCCCAATCCTTACCGCGTCGAACGCGCCCCCAGGCTTAC
CATGGGCCAAGAAAGCCTCCTGCAATGGAAGCAACGACTGCAAAACTTTCAGGACAAGGTTCGTCAAAATCCAGCCGCAA
GCCAAACCAGTTTACTTTTTGAGACCCAGTCGAAGCCAGACCACTGGGACGCCGAAAAAATTGACCCCTTTACCCTGCCG
CCGAAGCCCTGGGATTTCTATCGGGAGCGTTATGATCCCCTCCAGGAAGGTCAAGCGAATATTTACTTTGTCCTCGACCA
TGCGGTGCCGTTGCTGCTCTATGTGGGGGAAACAAAATTATCGATTAAGCAACGCTGGAAAGGGGTTCATGATTGCAAGG
ACTATATTGATGCTTACATCAGCTTGCACCGTCAGTATGGCTTGAATGTGGCTGTTAATTTAGCGTTTAATGTGTCAGTC
CCCACAGACCGTTCCCAACGGCTCGCTCTAGAACGGGATTTAATCTTGAAGTGGCGATCGCCGTTTAATAAAGAATGTTG
GCGCTACTGGGGACAGCCCTTCCAGCGGCGGGGCTAA

Upstream 100 bases:

>100_bases
GATGCCGATGGGCTACCCCTCGAATTTATCCGGTATCAGGGAGCACGGGCCTAGGATTTGCCTTTGCTACACTGGAGAGC
CTGTGAATTTTTTCTCGCCC

Downstream 100 bases:

>100_bases
GATGGGGCTATGCTCCCCGTAAATTTTTCTACCCATTGCCTATAATTGGCGATGTTTCGCTTCCTCTTTTTCCCTTGGCA
TGGCTATTTCTCCTAGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MTDEQLKLFSVADAPNPYRVERAPRLTMGQESLLQWKQRLQNFQDKVRQNPAASQTSLLFETQSKPDHWDAEKIDPFTLP
PKPWDFYRERYDPLQEGQANIYFVLDHAVPLLLYVGETKLSIKQRWKGVHDCKDYIDAYISLHRQYGLNVAVNLAFNVSV
PTDRSQRLALERDLILKWRSPFNKECWRYWGQPFQRRG

Sequences:

>Translated_198_residues
MTDEQLKLFSVADAPNPYRVERAPRLTMGQESLLQWKQRLQNFQDKVRQNPAASQTSLLFETQSKPDHWDAEKIDPFTLP
PKPWDFYRERYDPLQEGQANIYFVLDHAVPLLLYVGETKLSIKQRWKGVHDCKDYIDAYISLHRQYGLNVAVNLAFNVSV
PTDRSQRLALERDLILKWRSPFNKECWRYWGQPFQRRG
>Mature_197_residues
TDEQLKLFSVADAPNPYRVERAPRLTMGQESLLQWKQRLQNFQDKVRQNPAASQTSLLFETQSKPDHWDAEKIDPFTLPP
KPWDFYRERYDPLQEGQANIYFVLDHAVPLLLYVGETKLSIKQRWKGVHDCKDYIDAYISLHRQYGLNVAVNLAFNVSVP
TDRSQRLALERDLILKWRSPFNKECWRYWGQPFQRRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23484; Mature: 23353

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDEQLKLFSVADAPNPYRVERAPRLTMGQESLLQWKQRLQNFQDKVRQNPAASQTSLLF
CCCCCEEEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEE
ETQSKPDHWDAEKIDPFTLPPKPWDFYRERYDPLQEGQANIYFVLDHAVPLLLYVGETKL
ECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCCEEEEEECCCCEEEEEECCCHH
SIKQRWKGVHDCKDYIDAYISLHRQYGLNVAVNLAFNVSVPTDRSQRLALERDLILKWRS
HHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCC
PFNKECWRYWGQPFQRRG
CCCHHHHHHCCCHHHCCC
>Mature Secondary Structure 
TDEQLKLFSVADAPNPYRVERAPRLTMGQESLLQWKQRLQNFQDKVRQNPAASQTSLLF
CCCCEEEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEE
ETQSKPDHWDAEKIDPFTLPPKPWDFYRERYDPLQEGQANIYFVLDHAVPLLLYVGETKL
ECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCCEEEEEECCCCEEEEEECCCHH
SIKQRWKGVHDCKDYIDAYISLHRQYGLNVAVNLAFNVSVPTDRSQRLALERDLILKWRS
HHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCC
PFNKECWRYWGQPFQRRG
CCCHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA