Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078552

Identifier: 170078552

GI number: 170078552

Start: 2027487

End: 2028143

Strand: Direct

Name: 170078552

Synonym: SYNPCC7002_A1947

Alternate gene names: NA

Gene position: 2027487-2028143 (Clockwise)

Preceding gene: 170078551

Following gene: 170078553

Centisome position: 67.4

GC content: 54.64

Gene sequence:

>657_bases
ATGGCTATTTCTCCTAGAAAAGTGGCGCGACCGCGAGCGCCCCGACAGCAGCAAACAACGTTTTGCCGACGGCGCTGGTT
TGTTTTGGGTCTAATTGGCCTAACCTGTGGGGCGATCGCCTACCAACGTATCCAAGGCGCTTTACGTCCAGCCAAAGCCA
TTTTTGTCCTTGGGGGCCACGAAGAACGGGAGCGGTTTGCGGCCCAATTTGCCCAGGAACATCCGGATCTCAAAGTTTGG
GTTTCCTCCGGTAGTCCACCGGAATATGCCCGCCAGATTTTTGCGAACTATCAAATCGAAGGCGATCGCCTCCAGCTCGA
TTACCAGGCCGAAGACACCGTCACCAACTTCACCAGCCTCGTAGACGAATTTAAACAAGAAAATATCGATAGCGTCTACC
TCATCACTTCCGAAAACCACATGAACCGCGCCAAGCTCGTGGCCAGCATTGTTTTCGGCACCCGTGACATTGCCATTAAA
CCAGTGCCTGTCCCATCGGATAATCCCCCGGAAACGACGATGAAATGTATCCGTGATGGGCTCCGCTCAATCCTCTGGGT
GGTCACCGGCGAAACGGGCCGCGAGTGGCAAACCTTGACTCAGATCCCTACCCAGGCGATCGCCCCCAGCGCCAGACGAC
CAGAGGAGAATTTATAA

Upstream 100 bases:

>100_bases
CCCTTCCAGCGGCGGGGCTAAGATGGGGCTATGCTCCCCGTAAATTTTTCTACCCATTGCCTATAATTGGCGATGTTTCG
CTTCCTCTTTTTCCCTTGGC

Downstream 100 bases:

>100_bases
TAGCTGAGGTTTTGCTTGCGTACAGGAGTCATGATGGAGTCAACCGCCGAACCGATTTATTTCTACAAGGCCCATGACCC
CTATGGCTGTTTCTCGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MAISPRKVARPRAPRQQQTTFCRRRWFVLGLIGLTCGAIAYQRIQGALRPAKAIFVLGGHEERERFAAQFAQEHPDLKVW
VSSGSPPEYARQIFANYQIEGDRLQLDYQAEDTVTNFTSLVDEFKQENIDSVYLITSENHMNRAKLVASIVFGTRDIAIK
PVPVPSDNPPETTMKCIRDGLRSILWVVTGETGREWQTLTQIPTQAIAPSARRPEENL

Sequences:

>Translated_218_residues
MAISPRKVARPRAPRQQQTTFCRRRWFVLGLIGLTCGAIAYQRIQGALRPAKAIFVLGGHEERERFAAQFAQEHPDLKVW
VSSGSPPEYARQIFANYQIEGDRLQLDYQAEDTVTNFTSLVDEFKQENIDSVYLITSENHMNRAKLVASIVFGTRDIAIK
PVPVPSDNPPETTMKCIRDGLRSILWVVTGETGREWQTLTQIPTQAIAPSARRPEENL
>Mature_217_residues
AISPRKVARPRAPRQQQTTFCRRRWFVLGLIGLTCGAIAYQRIQGALRPAKAIFVLGGHEERERFAAQFAQEHPDLKVWV
SSGSPPEYARQIFANYQIEGDRLQLDYQAEDTVTNFTSLVDEFKQENIDSVYLITSENHMNRAKLVASIVFGTRDIAIKP
VPVPSDNPPETTMKCIRDGLRSILWVVTGETGREWQTLTQIPTQAIAPSARRPEENL

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24665; Mature: 24534

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISPRKVARPRAPRQQQTTFCRRRWFVLGLIGLTCGAIAYQRIQGALRPAKAIFVLGGH
CCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
EERERFAAQFAQEHPDLKVWVSSGSPPEYARQIFANYQIEGDRLQLDYQAEDTVTNFTSL
HHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCEECCCEEEEEECCHHHHHHHHHH
VDEFKQENIDSVYLITSENHMNRAKLVASIVFGTRDIAIKPVPVPSDNPPETTMKCIRDG
HHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHH
LRSILWVVTGETGREWQTLTQIPTQAIAPSARRPEENL
HHHHEEEEECCCCCHHHHHHHCCHHHCCCCCCCCCCCC
>Mature Secondary Structure 
AISPRKVARPRAPRQQQTTFCRRRWFVLGLIGLTCGAIAYQRIQGALRPAKAIFVLGGH
CCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
EERERFAAQFAQEHPDLKVWVSSGSPPEYARQIFANYQIEGDRLQLDYQAEDTVTNFTSL
HHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCEECCCEEEEEECCHHHHHHHHHH
VDEFKQENIDSVYLITSENHMNRAKLVASIVFGTRDIAIKPVPVPSDNPPETTMKCIRDG
HHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHH
LRSILWVVTGETGREWQTLTQIPTQAIAPSARRPEENL
HHHHEEEEECCCCCHHHHHHHCCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA