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The map label for this gene is rpmF

Identifier: 170078498

GI number: 170078498

Start: 1978013

End: 1978180

Strand: Reverse

Name: rpmF

Synonym: SYNPCC7002_A1893

Alternate gene names: 170078498

Gene position: 1978180-1978013 (Counterclockwise)

Preceding gene: 170078505

Following gene: 170078497

Centisome position: 65.76

GC content: 51.79

Gene sequence:

>168_bases
ATGGCAGTTCCAAAGAAGAAAACCTCAAAGGCAAAGCGTGACCAACGCCGGGCCCACTGGAAGCGTAAGGCAACCATCGA
AGCCCAAAAGGCCCTTTCCCTTGGCAAATCTGTGCTCACTGGTCGTTCTAGCTTTGTTTATCCTTCCCCCGAAGACGACG
AAGAGTAA

Upstream 100 bases:

>100_bases
TTCGTTCAACCCCACAATTCAAGAGATTCTGACGGAGGACTTACTTTTTGGGAGAGAAGATTTTATAATGGTAATTCTGT
AAAAATCTGTAGTTAATCCC

Downstream 100 bases:

>100_bases
ATTCAGTATTTTTCTGGCCCCAGTGCCCTCTAAATCTCTTATTAAAAATAAATATAGTTCTGATACAGCAAGGTGGAAAG
TCTTCCGCCTTTTTTTGTGA

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 55; Mature: 54

Protein sequence:

>55_residues
MAVPKKKTSKAKRDQRRAHWKRKATIEAQKALSLGKSVLTGRSSFVYPSPEDDEE

Sequences:

>Translated_55_residues
MAVPKKKTSKAKRDQRRAHWKRKATIEAQKALSLGKSVLTGRSSFVYPSPEDDEE
>Mature_54_residues
AVPKKKTSKAKRDQRRAHWKRKATIEAQKALSLGKSVLTGRSSFVYPSPEDDEE

Specific function: Unknown

COG id: COG0333

COG function: function code J; Ribosomal protein L32

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL32_SYNP2 (B1XQI5)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001735136.1
- ProteinModelPortal:   B1XQI5
- SMR:   B1XQI5
- GeneID:   6057725
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A1893
- HOGENOM:   HBG621788
- OMA:   TGRSTFV
- ProtClustDB:   PRK01110
- GO:   GO:0006412
- HAMAP:   MF_00340
- InterPro:   IPR002677
- TIGRFAMs:   TIGR01031

Pfam domain/function: PF01783 Ribosomal_L32p

EC number: NA

Molecular weight: Translated: 6243; Mature: 6112

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPKKKTSKAKRDQRRAHWKRKATIEAQKALSLGKSVLTGRSSFVYPSPEDDEE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AVPKKKTSKAKRDQRRAHWKRKATIEAQKALSLGKSVLTGRSSFVYPSPEDDEE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA