Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078493

Identifier: 170078493

GI number: 170078493

Start: 1972587

End: 1972805

Strand: Direct

Name: 170078493

Synonym: SYNPCC7002_A1887

Alternate gene names: NA

Gene position: 1972587-1972805 (Clockwise)

Preceding gene: 170078491

Following gene: 170078495

Centisome position: 65.58

GC content: 50.23

Gene sequence:

>219_bases
ATGGACAACGGTTATTTTAGCCCAGAACCTTTAGAGGCGAACGAGTTTAAGGCTTTAATGTTGCGCCACGGCGTCACCAA
AACGGATTTAGTCAAGTCCGGCTGGTTTGAAGAATACGAGATCGCCAACTGCATCGAACGACGCAAAGCCCAAAATCCGA
GCCGTGCCCTTAAACGATTGTTCGGGCTATATGCCCATTTTCATGGCTGGGGGGCCTAG

Upstream 100 bases:

>100_bases
CCGAAAACAAAGAGCCTTAAAATGTTCTTAACAGTCAAATAAAAAATCCCTAAGAAGCGCTCACTTCCCAGGGAATATCC
ATAAGTTGAGGTAGCAACAA

Downstream 100 bases:

>100_bases
GCCGTAGGGGATTATCCCGCAGAATTTCAAAGGCCCGCTGGTGGGTTTGACGTTTCAAGTGATGCTGGTAGGTGGCATTG
TGAACCGATAGGCGATGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MDNGYFSPEPLEANEFKALMLRHGVTKTDLVKSGWFEEYEIANCIERRKAQNPSRALKRLFGLYAHFHGWGA

Sequences:

>Translated_72_residues
MDNGYFSPEPLEANEFKALMLRHGVTKTDLVKSGWFEEYEIANCIERRKAQNPSRALKRLFGLYAHFHGWGA
>Mature_72_residues
MDNGYFSPEPLEANEFKALMLRHGVTKTDLVKSGWFEEYEIANCIERRKAQNPSRALKRLFGLYAHFHGWGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8345; Mature: 8345

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNGYFSPEPLEANEFKALMLRHGVTKTDLVKSGWFEEYEIANCIERRKAQNPSRALKRL
CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHH
FGLYAHFHGWGA
HHHHHHHHCCCC
>Mature Secondary Structure
MDNGYFSPEPLEANEFKALMLRHGVTKTDLVKSGWFEEYEIANCIERRKAQNPSRALKRL
CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHH
FGLYAHFHGWGA
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA