| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is hisA
Identifier: 170078495
GI number: 170078495
Start: 1974117
End: 1974887
Strand: Direct
Name: hisA
Synonym: SYNPCC7002_A1890
Alternate gene names: 170078495
Gene position: 1974117-1974887 (Clockwise)
Preceding gene: 170078493
Following gene: 170078496
Centisome position: 65.63
GC content: 54.73
Gene sequence:
>771_bases ATGGAAGTTATTCCCGCTATTGATCTGCTCGGTGGCCAATGTGTGCGCCTCTATCAGGGTGATTATCAACAGGCGCAAGT GTTTAATAATGACCCGGTTCAGGTGGCACGGACTTGGGCTGAGCAGGGGGCAACGCGGCTCCATGTGGTGGATTTAGACG GGGCAAAACAGGGAGAGTCGGTCAATCTAGGGGCGATCGCCAAAATTGCAGCAGCGATTGATATTCCTGTACAGGTGGGC GGTGGTCTCCGTACGGTAGAAAGTGTGGCGCAATTGTTTGATGTGGGTGTAGAGCGAGCCATTCTTGGGACGGCGGCGGT AGATAATCCGGATCTCGTGACAGAACTCTGTGCCAAATATCCGGGCCGGATTGCGGTTGGGATTGATGCCCGCGATGGAA AGGTAGCGACAAAGGGATGGTTGGAAACATCGGCGGTTTTAGCGACGGATTTGGCGAAACAGATGGCTACCCAGGGGGTC GCTGCCATTATTTACACGGATATTCATCGAGATGGCACCATGGCTGGGCCTAATTTGGAGGCGCTGCGGGAATTGGCGGC CACCATTGAGATTCCGGTGATTGCGTCGGGGGGCGTGAGTTCTTTGGCGGATCTGGTTAATCTTGTGGCCCTCGAAGGGA TCGGAGTCACAGGAGCGATTGTGGGCCGGGCGATTTATACCGGAGATATTAATTTGGCTGAAGCGGTGAAGGCGGTTGGC CCCCAACGTTTACAGGATGTGTTTCCGGATGATGGTACGGCGATCGCCTAA
Upstream 100 bases:
>100_bases AGGTTTTGCAGACCTCTGCCTTACCACTTGGCTATACCACCGGGTCAACAGTTCGCTATTATAACAGGGCTTTTGTTCAC ATCACAACATTTTTTTCGTT
Downstream 100 bases:
>100_bases TTTTCGTGCTAGATTGAGTCGTGAAATTGTAATGGAACAAACCACATCAAAAGCGATTCTAGAGTAAAGCTATATAGTGA TCGACTGCACCACTTTATGC
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MEVIPAIDLLGGQCVRLYQGDYQQAQVFNNDPVQVARTWAEQGATRLHVVDLDGAKQGESVNLGAIAKIAAAIDIPVQVG GGLRTVESVAQLFDVGVERAILGTAAVDNPDLVTELCAKYPGRIAVGIDARDGKVATKGWLETSAVLATDLAKQMATQGV AAIIYTDIHRDGTMAGPNLEALRELAATIEIPVIASGGVSSLADLVNLVALEGIGVTGAIVGRAIYTGDINLAEAVKAVG PQRLQDVFPDDGTAIA
Sequences:
>Translated_256_residues MEVIPAIDLLGGQCVRLYQGDYQQAQVFNNDPVQVARTWAEQGATRLHVVDLDGAKQGESVNLGAIAKIAAAIDIPVQVG GGLRTVESVAQLFDVGVERAILGTAAVDNPDLVTELCAKYPGRIAVGIDARDGKVATKGWLETSAVLATDLAKQMATQGV AAIIYTDIHRDGTMAGPNLEALRELAATIEIPVIASGGVSSLADLVNLVALEGIGVTGAIVGRAIYTGDINLAEAVKAVG PQRLQDVFPDDGTAIA >Mature_256_residues MEVIPAIDLLGGQCVRLYQGDYQQAQVFNNDPVQVARTWAEQGATRLHVVDLDGAKQGESVNLGAIAKIAAAIDIPVQVG GGLRTVESVAQLFDVGVERAILGTAAVDNPDLVTELCAKYPGRIAVGIDARDGKVATKGWLETSAVLATDLAKQMATQGV AAIIYTDIHRDGTMAGPNLEALRELAATIEIPVIASGGVSSLADLVNLVALEGIGVTGAIVGRAIYTGDINLAEAVKAVG PQRLQDVFPDDGTAIA
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=240, Percent_Identity=37.5, Blast_Score=155, Evalue=3e-39, Organism=Escherichia coli, GI1788336, Length=243, Percent_Identity=27.5720164609054, Blast_Score=95, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_SYNP2 (B1XQI2)
Other databases:
- EMBL: CP000951 - RefSeq: YP_001735133.1 - ProteinModelPortal: B1XQI2 - SMR: B1XQI2 - GeneID: 6056026 - GenomeReviews: CP000951_GR - KEGG: syp:SYNPCC7002_A1890 - HOGENOM: HBG541613 - OMA: SIIYTDI - ProtClustDB: PRK00748 - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00007
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16
Molecular weight: Translated: 26490; Mature: 26490
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: ACT_SITE 8-8 ACT_SITE 129-129
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVIPAIDLLGGQCVRLYQGDYQQAQVFNNDPVQVARTWAEQGATRLHVVDLDGAKQGES CCCCCCHHHCCCCEEEECCCCCHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCC VNLGAIAKIAAAIDIPVQVGGGLRTVESVAQLFDVGVERAILGTAAVDNPDLVTELCAKY CCHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC PGRIAVGIDARDGKVATKGWLETSAVLATDLAKQMATQGVAAIIYTDIHRDGTMAGPNLE CCEEEEEEECCCCCEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHH ALRELAATIEIPVIASGGVSSLADLVNLVALEGIGVTGAIVGRAIYTGDINLAEAVKAVG HHHHHHHHEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHCEEEECCCCHHHHHHHCC PQRLQDVFPDDGTAIA HHHHHHCCCCCCCCCC >Mature Secondary Structure MEVIPAIDLLGGQCVRLYQGDYQQAQVFNNDPVQVARTWAEQGATRLHVVDLDGAKQGES CCCCCCHHHCCCCEEEECCCCCHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCC VNLGAIAKIAAAIDIPVQVGGGLRTVESVAQLFDVGVERAILGTAAVDNPDLVTELCAKY CCHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC PGRIAVGIDARDGKVATKGWLETSAVLATDLAKQMATQGVAAIIYTDIHRDGTMAGPNLE CCEEEEEEECCCCCEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHH ALRELAATIEIPVIASGGVSSLADLVNLVALEGIGVTGAIVGRAIYTGDINLAEAVKAVG HHHHHHHHEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHCEEEECCCCHHHHHHHCC PQRLQDVFPDDGTAIA HHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA