Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078492

Identifier: 170078492

GI number: 170078492

Start: 1971691

End: 1972314

Strand: Reverse

Name: 170078492

Synonym: SYNPCC7002_A1886

Alternate gene names: NA

Gene position: 1972314-1971691 (Counterclockwise)

Preceding gene: 170078494

Following gene: 170078487

Centisome position: 65.57

GC content: 47.92

Gene sequence:

>624_bases
ATGGCGAAGAAATTTGGCTGGTCTCCGGCGATACCCTACCCGTTGGCCTGGTTGCGTTTATTGATTAATTTAATTGTTTT
TGGTACGACTGCAGGCTTGATTAAGGAGGCTTCTGAAAATTATGTTTTAACGGTTCATCCCTTGTTTTTGCTGTTTGTGC
TGGTGTTTATGGGTGGACTGGCCTTTGGGCTGCATTATCTATCCCAATGGATATTGGTGAGATTGGCAGGCATTCGAGAG
ATGGGGATGATTGATAGTCTCTGGGAAGCGGTGCTATTGGTGATGGTGACGGTAAACAGCCTTCTCTTGGTGTTGTTGCT
CTATGCGGGGACTTATATCGGCGCTCCCTTTGTCGAGCCGGAAAGCTTAGATGTGGTCTCTGCTGAGACGATCTGGATCG
CCATTATGTATTCGGCGATCGCCTTATATCTGTACCACCTGGAATATTTGGTCAGACACCCGGAAGTTTTGAGACGATAT
TTCACGCCACCAGAGGAACGGATCAACCTGGAGAAAAAACCACCCAAGACTGAGCTAACGCCCCAGACACGACAGCGCGA
AATCGATTGGGAGCTAGAGCGACTCAAGGCCCAGATCGACAATGAAAAAAGGTTCGGGAAATAA

Upstream 100 bases:

>100_bases
GGGTAGGGAAACGCCCTCTTTTAATGGTCTTTTTAGGGGGCGTTTTACGATGGGAATAATTTTCTTCTGGGTAAGATTAT
GGCAATGAGGAAGAAAAATT

Downstream 100 bases:

>100_bases
TCCTGAACCTTTGTGATTGGAGAGAAACAAACTTTTTATTTGATGACGGCGGTGACGATCGTCGTGATCGTGGCAGTCGC
CAACAGGCCAAAGGCTAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MAKKFGWSPAIPYPLAWLRLLINLIVFGTTAGLIKEASENYVLTVHPLFLLFVLVFMGGLAFGLHYLSQWILVRLAGIRE
MGMIDSLWEAVLLVMVTVNSLLLVLLLYAGTYIGAPFVEPESLDVVSAETIWIAIMYSAIALYLYHLEYLVRHPEVLRRY
FTPPEERINLEKKPPKTELTPQTRQREIDWELERLKAQIDNEKRFGK

Sequences:

>Translated_207_residues
MAKKFGWSPAIPYPLAWLRLLINLIVFGTTAGLIKEASENYVLTVHPLFLLFVLVFMGGLAFGLHYLSQWILVRLAGIRE
MGMIDSLWEAVLLVMVTVNSLLLVLLLYAGTYIGAPFVEPESLDVVSAETIWIAIMYSAIALYLYHLEYLVRHPEVLRRY
FTPPEERINLEKKPPKTELTPQTRQREIDWELERLKAQIDNEKRFGK
>Mature_206_residues
AKKFGWSPAIPYPLAWLRLLINLIVFGTTAGLIKEASENYVLTVHPLFLLFVLVFMGGLAFGLHYLSQWILVRLAGIREM
GMIDSLWEAVLLVMVTVNSLLLVLLLYAGTYIGAPFVEPESLDVVSAETIWIAIMYSAIALYLYHLEYLVRHPEVLRRYF
TPPEERINLEKKPPKTELTPQTRQREIDWELERLKAQIDNEKRFGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23849; Mature: 23717

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS00962 RIBOSOMAL_S2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKFGWSPAIPYPLAWLRLLINLIVFGTTAGLIKEASENYVLTVHPLFLLFVLVFMGGL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHH
AFGLHYLSQWILVRLAGIREMGMIDSLWEAVLLVMVTVNSLLLVLLLYAGTYIGAPFVEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
ESLDVVSAETIWIAIMYSAIALYLYHLEYLVRHPEVLRRYFTPPEERINLEKKPPKTELT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHCCCCCCCCCCCCC
PQTRQREIDWELERLKAQIDNEKRFGK
CHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AKKFGWSPAIPYPLAWLRLLINLIVFGTTAGLIKEASENYVLTVHPLFLLFVLVFMGGL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHH
AFGLHYLSQWILVRLAGIREMGMIDSLWEAVLLVMVTVNSLLLVLLLYAGTYIGAPFVEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
ESLDVVSAETIWIAIMYSAIALYLYHLEYLVRHPEVLRRYFTPPEERINLEKKPPKTELT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHCCCCCCCCCCCCC
PQTRQREIDWELERLKAQIDNEKRFGK
CHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA