| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078491
Identifier: 170078491
GI number: 170078491
Start: 1971443
End: 1971655
Strand: Direct
Name: 170078491
Synonym: SYNPCC7002_A1885
Alternate gene names: NA
Gene position: 1971443-1971655 (Clockwise)
Preceding gene: 170078490
Following gene: 170078493
Centisome position: 65.54
GC content: 51.64
Gene sequence:
>213_bases ATGACCCAACGCTGGACAGACGAAATGCTCGATAAGCTCGCCGATGACGTACAGGAGCTTACCGAATCTATCAAAACCCA ACGGGACGAACAGAAGGAACTGACCATCCGGTTCAATGCCTACCAGATGGCCTCTCAATGGGTGGTTAATTTAGCCTTTG GCCTGTTGGCGACTGCCACGATCACGACGATCGTCACCGCCGTCATCAAATAA
Upstream 100 bases:
>100_bases GCCAGCACCCAGATCAGCGGCGTTGAAATGGATTTATGACTCTCTGGTAGCCCTAATCTGGATGACATTCCGTTTTAATA AAAGAAATTGAGGTAGCACA
Downstream 100 bases:
>100_bases AAAGTTTGTTTCTCTCCAATCACAAAGGTTCAGGATTATTTCCCGAACCTTTTTTCATTGTCGATCTGGGCCTTGAGTCG CTCTAGCTCCCAATCGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MTQRWTDEMLDKLADDVQELTESIKTQRDEQKELTIRFNAYQMASQWVVNLAFGLLATATITTIVTAVIK
Sequences:
>Translated_70_residues MTQRWTDEMLDKLADDVQELTESIKTQRDEQKELTIRFNAYQMASQWVVNLAFGLLATATITTIVTAVIK >Mature_69_residues TQRWTDEMLDKLADDVQELTESIKTQRDEQKELTIRFNAYQMASQWVVNLAFGLLATATITTIVTAVIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8034; Mature: 7903
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQRWTDEMLDKLADDVQELTESIKTQRDEQKELTIRFNAYQMASQWVVNLAFGLLATAT CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITTIVTAVIK HHHHHHHHCC >Mature Secondary Structure TQRWTDEMLDKLADDVQELTESIKTQRDEQKELTIRFNAYQMASQWVVNLAFGLLATAT CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITTIVTAVIK HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA