| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078493
Identifier: 170078493
GI number: 170078493
Start: 1972587
End: 1972805
Strand: Direct
Name: 170078493
Synonym: SYNPCC7002_A1887
Alternate gene names: NA
Gene position: 1972587-1972805 (Clockwise)
Preceding gene: 170078491
Following gene: 170078495
Centisome position: 65.58
GC content: 50.23
Gene sequence:
>219_bases ATGGACAACGGTTATTTTAGCCCAGAACCTTTAGAGGCGAACGAGTTTAAGGCTTTAATGTTGCGCCACGGCGTCACCAA AACGGATTTAGTCAAGTCCGGCTGGTTTGAAGAATACGAGATCGCCAACTGCATCGAACGACGCAAAGCCCAAAATCCGA GCCGTGCCCTTAAACGATTGTTCGGGCTATATGCCCATTTTCATGGCTGGGGGGCCTAG
Upstream 100 bases:
>100_bases CCGAAAACAAAGAGCCTTAAAATGTTCTTAACAGTCAAATAAAAAATCCCTAAGAAGCGCTCACTTCCCAGGGAATATCC ATAAGTTGAGGTAGCAACAA
Downstream 100 bases:
>100_bases GCCGTAGGGGATTATCCCGCAGAATTTCAAAGGCCCGCTGGTGGGTTTGACGTTTCAAGTGATGCTGGTAGGTGGCATTG TGAACCGATAGGCGATGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 72
Protein sequence:
>72_residues MDNGYFSPEPLEANEFKALMLRHGVTKTDLVKSGWFEEYEIANCIERRKAQNPSRALKRLFGLYAHFHGWGA
Sequences:
>Translated_72_residues MDNGYFSPEPLEANEFKALMLRHGVTKTDLVKSGWFEEYEIANCIERRKAQNPSRALKRLFGLYAHFHGWGA >Mature_72_residues MDNGYFSPEPLEANEFKALMLRHGVTKTDLVKSGWFEEYEIANCIERRKAQNPSRALKRLFGLYAHFHGWGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8345; Mature: 8345
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNGYFSPEPLEANEFKALMLRHGVTKTDLVKSGWFEEYEIANCIERRKAQNPSRALKRL CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHH FGLYAHFHGWGA HHHHHHHHCCCC >Mature Secondary Structure MDNGYFSPEPLEANEFKALMLRHGVTKTDLVKSGWFEEYEIANCIERRKAQNPSRALKRL CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHH FGLYAHFHGWGA HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA