Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078473

Identifier: 170078473

GI number: 170078473

Start: 1959937

End: 1961850

Strand: Reverse

Name: 170078473

Synonym: SYNPCC7002_A1867

Alternate gene names: NA

Gene position: 1961850-1959937 (Counterclockwise)

Preceding gene: 170078474

Following gene: 170078472

Centisome position: 65.22

GC content: 47.39

Gene sequence:

>1914_bases
ATGTCTTGTCCAAATCTGGCGACAAAATCGGATATATCGGCCCTTGAGGGGAGAATTTTAGAGGCGCTTTCGGGGCTGGC
AACCAAAGGTGATATCTCTGACCTGGAATCGAAAATTGATAGCTTTAGATCCACTATTGAAGATCGTTTAAGCAGCTTAA
ATAGTCGAATTAGTGGCCTTGATTCAAAATTGGATGATGCGTTGGCGGCATTGGGGCGGATCGAGGATTTGCTAGAGGGC
ACAAACGGGCGAATCAGCAGTATTTGGGATGCAATTTCCAATATTGTGGAATCTTTGGTTAGCCTAATCCGCGATCCAAT
TGTGGCGGCGATCAATGCCCAACGGGCTTTAGTTGAGGGGCTTTTTGATTCGCTCCAAGAATTTATCAGGGGGTATTTTG
ATGGAATTCAGGCCTTTATAGATGGGGCGTTTGCTTCTCAAAAGGCTTTTATTGATGGTTTTTTTGGGAGTATCCAAACC
CTGATCCAGGAATATTTTGGCCTGGTGCGGGATTTGGTTCGCCGAACGAATGAAGAAATAGGGGAGGTTTTAGCTCTAGT
TAGAGGATTGGGGGACGATGTGGCGAGTCTCCGAAGTTTGGCCGCCGAAATTCGGCAAGCAGTAAGCGAGAATGGGTCAA
CATTACGGGTAATTTCCTCGACTCAACTCCCACAATTGGTTAGCTTATGCCGGGATATTGGGGAGGGAGTAGCAGCCCTG
CGAGGGGTGGCGACAGAAATCCGGCAAGCAGTAAGCGAGAATGGGTCAACATTACGGGTAATTTCCTCGACTCAACTCCC
ACAATTGGTTAGCTTATGCCGGGATATTGGGGAGGGAGTAGCAGCCCTGCGAGGGGTGGCGACAGAAATCCGGCAATCAG
TAGCTGAAAATGGGTCAACATTACGGGTAATCTCCTCGACCCAGCTCCCACAATTGGTTAGCTTATGCCGGGATATTGGG
GAGGGAGTAGAGGCTTTACCTGGGGATGTTTGGGGTTATGGCCTGAGCTGCGGCCCTGCTGGGAGTGCGGTTTGTCGATC
CCTGTCTGCTGCGGAAGATCCAGAGAAAAACTTTAGTGATGATGACCGCCAGAAGCTTGACGATATTAAGGATGACCTGG
ACAACTTGGGGAATGATTTGGAGGCGATCGCCAAAGTGACAGGCGTCCCAGATTTCCCTGGAAAGCTGCCTAAATCGTTA
CTAGGAGATGACAACCTCAAGGGAGAAACTGAAGTAGAAAGCATCCCCCAGTTCATCCTGTGGCTAACAAAACAGCTTGA
TGCTTTAGTGGGAGAATTTCCGGTGAGTATCGAAGTCACAGACAATGATTTGACTCAATCAGGGAACCAAAAACAAACCA
TTCAGCTCCGGAATATCGCCGAAGCCTTTGCCGAGCTGTACGGGCAGGGAGTCTTAACCACAACCCATCAATCAGTGCAA
ACAAATGGCCTTGTCCGGGTGGGAACAGAATTAACATCATTAAAAGTGATGGTGGCCGTAGCCCAGGATTTAATCATGGC
CACGACTGAATTCCTTGGGTTCAAAACCAAGCAAAAAAGAAGGGATATCGATACATCTTTTACCCTCAAAAAATCAGGCG
ATAACAATTACACTCTGGCTAATTTTCTTGACTCCGACAAAATTTCCTACAAAGGCTATGAATTTGATGACGATGACATC
CTGATCGAATATTTGCCCCAGTTGATGTATGGCGTCTCCCTCATTAAAGCGGCCACCCTCCGAGGTGAAGATGATGTGAA
CGAAATTGAGGATCGCGTCAAGGAAGTCTTGGAGGATGGGGCTTCCGCTTGGGATAAATTCCAGGAAATTGTCAACAATC
CCGATTCTGAATACAACATCGATCAAGACGTGAAATTCAAAATTACTGACCGCGATGTGGAGATTGATGAATAA

Upstream 100 bases:

>100_bases
TTTAAGGGGTGTTATGGGCTGTTTGAATGTGGGCTGCTTTACGGTGTTTGTGATTTTTGTGATTATTTCACTGCTGATTT
TGTCGGGGGTCATCCTTTAA

Downstream 100 bases:

>100_bases
TGGCTTTTGAGCTGGACATCGGCGATCTGATTAGCCGCCAAATTAGGGTAGAGGTCGCCCCAGAAGGCCGAGAGATTGGT
GATCTTCTTGATGTTTTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 637; Mature: 636

Protein sequence:

>637_residues
MSCPNLATKSDISALEGRILEALSGLATKGDISDLESKIDSFRSTIEDRLSSLNSRISGLDSKLDDALAALGRIEDLLEG
TNGRISSIWDAISNIVESLVSLIRDPIVAAINAQRALVEGLFDSLQEFIRGYFDGIQAFIDGAFASQKAFIDGFFGSIQT
LIQEYFGLVRDLVRRTNEEIGEVLALVRGLGDDVASLRSLAAEIRQAVSENGSTLRVISSTQLPQLVSLCRDIGEGVAAL
RGVATEIRQAVSENGSTLRVISSTQLPQLVSLCRDIGEGVAALRGVATEIRQSVAENGSTLRVISSTQLPQLVSLCRDIG
EGVEALPGDVWGYGLSCGPAGSAVCRSLSAAEDPEKNFSDDDRQKLDDIKDDLDNLGNDLEAIAKVTGVPDFPGKLPKSL
LGDDNLKGETEVESIPQFILWLTKQLDALVGEFPVSIEVTDNDLTQSGNQKQTIQLRNIAEAFAELYGQGVLTTTHQSVQ
TNGLVRVGTELTSLKVMVAVAQDLIMATTEFLGFKTKQKRRDIDTSFTLKKSGDNNYTLANFLDSDKISYKGYEFDDDDI
LIEYLPQLMYGVSLIKAATLRGEDDVNEIEDRVKEVLEDGASAWDKFQEIVNNPDSEYNIDQDVKFKITDRDVEIDE

Sequences:

>Translated_637_residues
MSCPNLATKSDISALEGRILEALSGLATKGDISDLESKIDSFRSTIEDRLSSLNSRISGLDSKLDDALAALGRIEDLLEG
TNGRISSIWDAISNIVESLVSLIRDPIVAAINAQRALVEGLFDSLQEFIRGYFDGIQAFIDGAFASQKAFIDGFFGSIQT
LIQEYFGLVRDLVRRTNEEIGEVLALVRGLGDDVASLRSLAAEIRQAVSENGSTLRVISSTQLPQLVSLCRDIGEGVAAL
RGVATEIRQAVSENGSTLRVISSTQLPQLVSLCRDIGEGVAALRGVATEIRQSVAENGSTLRVISSTQLPQLVSLCRDIG
EGVEALPGDVWGYGLSCGPAGSAVCRSLSAAEDPEKNFSDDDRQKLDDIKDDLDNLGNDLEAIAKVTGVPDFPGKLPKSL
LGDDNLKGETEVESIPQFILWLTKQLDALVGEFPVSIEVTDNDLTQSGNQKQTIQLRNIAEAFAELYGQGVLTTTHQSVQ
TNGLVRVGTELTSLKVMVAVAQDLIMATTEFLGFKTKQKRRDIDTSFTLKKSGDNNYTLANFLDSDKISYKGYEFDDDDI
LIEYLPQLMYGVSLIKAATLRGEDDVNEIEDRVKEVLEDGASAWDKFQEIVNNPDSEYNIDQDVKFKITDRDVEIDE
>Mature_636_residues
SCPNLATKSDISALEGRILEALSGLATKGDISDLESKIDSFRSTIEDRLSSLNSRISGLDSKLDDALAALGRIEDLLEGT
NGRISSIWDAISNIVESLVSLIRDPIVAAINAQRALVEGLFDSLQEFIRGYFDGIQAFIDGAFASQKAFIDGFFGSIQTL
IQEYFGLVRDLVRRTNEEIGEVLALVRGLGDDVASLRSLAAEIRQAVSENGSTLRVISSTQLPQLVSLCRDIGEGVAALR
GVATEIRQAVSENGSTLRVISSTQLPQLVSLCRDIGEGVAALRGVATEIRQSVAENGSTLRVISSTQLPQLVSLCRDIGE
GVEALPGDVWGYGLSCGPAGSAVCRSLSAAEDPEKNFSDDDRQKLDDIKDDLDNLGNDLEAIAKVTGVPDFPGKLPKSLL
GDDNLKGETEVESIPQFILWLTKQLDALVGEFPVSIEVTDNDLTQSGNQKQTIQLRNIAEAFAELYGQGVLTTTHQSVQT
NGLVRVGTELTSLKVMVAVAQDLIMATTEFLGFKTKQKRRDIDTSFTLKKSGDNNYTLANFLDSDKISYKGYEFDDDDIL
IEYLPQLMYGVSLIKAATLRGEDDVNEIEDRVKEVLEDGASAWDKFQEIVNNPDSEYNIDQDVKFKITDRDVEIDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69298; Mature: 69167

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCPNLATKSDISALEGRILEALSGLATKGDISDLESKIDSFRSTIEDRLSSLNSRISGL
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSKLDDALAALGRIEDLLEGTNGRISSIWDAISNIVESLVSLIRDPIVAAINAQRALVEG
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFDSLQEFIRGYFDGIQAFIDGAFASQKAFIDGFFGSIQTLIQEYFGLVRDLVRRTNEEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEVLALVRGLGDDVASLRSLAAEIRQAVSENGSTLRVISSTQLPQLVSLCRDIGEGVAAL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH
RGVATEIRQAVSENGSTLRVISSTQLPQLVSLCRDIGEGVAALRGVATEIRQSVAENGST
HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
LRVISSTQLPQLVSLCRDIGEGVEALPGDVWGYGLSCGPAGSAVCRSLSAAEDPEKNFSD
EEEECCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
DDRQKLDDIKDDLDNLGNDLEAIAKVTGVPDFPGKLPKSLLGDDNLKGETEVESIPQFIL
HHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHH
WLTKQLDALVGEFPVSIEVTDNDLTQSGNQKQTIQLRNIAEAFAELYGQGVLTTTHQSVQ
HHHHHHHHHHCCCCCEEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEECHHHHH
TNGLVRVGTELTSLKVMVAVAQDLIMATTEFLGFKTKQKRRDIDTSFTLKKSGDNNYTLA
CCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCEEEH
NFLDSDKISYKGYEFDDDDILIEYLPQLMYGVSLIKAATLRGEDDVNEIEDRVKEVLEDG
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ASAWDKFQEIVNNPDSEYNIDQDVKFKITDRDVEIDE
HHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure 
SCPNLATKSDISALEGRILEALSGLATKGDISDLESKIDSFRSTIEDRLSSLNSRISGL
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSKLDDALAALGRIEDLLEGTNGRISSIWDAISNIVESLVSLIRDPIVAAINAQRALVEG
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFDSLQEFIRGYFDGIQAFIDGAFASQKAFIDGFFGSIQTLIQEYFGLVRDLVRRTNEEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEVLALVRGLGDDVASLRSLAAEIRQAVSENGSTLRVISSTQLPQLVSLCRDIGEGVAAL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH
RGVATEIRQAVSENGSTLRVISSTQLPQLVSLCRDIGEGVAALRGVATEIRQSVAENGST
HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
LRVISSTQLPQLVSLCRDIGEGVEALPGDVWGYGLSCGPAGSAVCRSLSAAEDPEKNFSD
EEEECCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
DDRQKLDDIKDDLDNLGNDLEAIAKVTGVPDFPGKLPKSLLGDDNLKGETEVESIPQFIL
HHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHH
WLTKQLDALVGEFPVSIEVTDNDLTQSGNQKQTIQLRNIAEAFAELYGQGVLTTTHQSVQ
HHHHHHHHHHCCCCCEEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEECHHHHH
TNGLVRVGTELTSLKVMVAVAQDLIMATTEFLGFKTKQKRRDIDTSFTLKKSGDNNYTLA
CCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCEEEH
NFLDSDKISYKGYEFDDDDILIEYLPQLMYGVSLIKAATLRGEDDVNEIEDRVKEVLEDG
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ASAWDKFQEIVNNPDSEYNIDQDVKFKITDRDVEIDE
HHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA