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The map label for this gene is glgB [H]

Identifier: 170078471

GI number: 170078471

Start: 1955720

End: 1958053

Strand: Direct

Name: glgB [H]

Synonym: SYNPCC7002_A1865

Alternate gene names: 170078471

Gene position: 1955720-1958053 (Clockwise)

Preceding gene: 170078470

Following gene: 170078476

Centisome position: 65.02

GC content: 49.7

Gene sequence:

>2334_bases
ATGCCTACTCTCCTCACTCCAGACCAGATCAACCAAATTGTTTCTAACCACCATGACAACCCCCATGCTGTCTTGGGTTG
TCATCCCACCAACGACGATCCCAATCCGAAAACCTGGTCAATTCGCGCTTATTTACCTTCTGCTAGCCAAGCTTGGGTGA
TTGATACCCCTTCCCAAACGGAACACCCGATGACAACGGTGCATCATCCCCACTTTTTTGAATGCACCCTCCAGAGTGAA
ACAACACCGAAATATCAACTGAAGCTCCAAGAAGGCGATCGCCAACACATCATCAACGATCCCTATGCCTTTGCCGAAGC
CCCCCACATTAGCGATCTCGATCTCCACCTCTTTGCCGAAGGGAATCACCACCGCATCTACAACAAACTGGGGGCACACC
TCGTCGAAGTCGATGGCATCAAAGGCGTTTACTTTGCCGTTTGGGCGCCCAATGCCCGCAACGTCTCCATCCTGGGCGAC
TTTAACAACTGGGATGGTCGCAAACACCAAATGCGCCGTTTAAACGTTGGTATCTGGGGAATTTTCATTCCTGACCTCGG
CCCCAACACCAAATACAAATACGAAATCAAAAACCAACACGGCCACATCTACGAAAAATCAGACCCCTACGGCTTTCTCC
GGGAAGTGCGCCCCGACACTGCCTCCATCGTTGCTGACCTCGACCAGTACCAATGGCAGGATCACGATTGGCTAGAACAA
CGTGCCAAACAAGACCCCCTCAAAAATCCTGTTTCCATCTACGAACTACACCTCGGCTCCTGGCTCCATGGTTCCGCCAC
CGAAAAAATGCAACTCCTTTCCGGTGAAGTCGATCCCATTCCCGTGGGCGATCAAAAACCCGGTGCCCGCTTCCTGAGCT
ATTACGAACTGGTTGATAAGCTCATCCCCTACGTTAAGGACATGGGCTACACCCACATCGAGCTACTGCCTGTCGCTGAA
CATCCCTTTGACGGTTCCTGGGGCTACCAAGTGACCGGCTACTATTCCCCCACTTCCCGCTTTGGCAATCCCGAAGACCT
GATGTATTTCATCGATCAATGCCACGCCAATGGTATCGGGGTGATCGTTGACTGGGTTCCTGGCCATTTCCCTAAGGATG
CCCATGGTCTCGCTTACTTCGATGGCACCCATCTCTATGAACACGCCGATCCCCGCAAAGGTGAGCACAAAGGCTGGGGC
ACCCTGATCTTTAACTACAATCGCAATGAGGTTCGCAACTTCCTCATTGCCAATGCCCTATTCTGGTTTGATAAATATCA
CATCGATGGCATTCGGGTCGATGCAGTGGCATCAATGCTCTACCTCGACTACGACCGGGAAGATGGCGAGTGGCTTCCCA
ATGACTACGGCGGCAACGAACACCTCGAAGCCGTAGAATTTCTCCGCCAAACCAACAATCTCATCTTCAAGTACTATCCA
GGGATTATCTCCGTTGCCGAAGAGTCCACGGCTTGGCCCATGGTTTCTCGTCCCACTTACCTCGGTGGCCTCGGCTTCAA
CCTCAAGTGGAATATGGGCTGGATGCACGACAATCTCAAATACTTCAGCATGGATCCCTGGTTCCGGCAGCACCACCAAA
ACAGCATTACCTTCAGTATGTGGTATCATCACAGCGAGAACTACATGTTGGCCCTTTCCCACGATGAAGTCGTCCATGGT
AAGAGCTCGATTATTGGCAAAATGCCGGGGGATGAATGGCAGAAATTTGCCAATGTGCGGGCTTTATTCGCCTATATGTT
TACCCATCCTGGTAAAAAGACCATGTTTATGAGCATGGAATTTGGCCAATGGAATGAGTGGAATGTTTGGAGTGACTTGA
GTTGGGATTTACTGCAACATGAACCCCACGCCAAACTCAAAGGTTTCTTCGGGGCATTAAATAGTCTCTATAAACAGGAA
CCGGCCCTTTACGAACGGGATTTTGAAGAGGAAGGATTCCAATGGATTGACTGTTCTGACAATCAAAATAGTGTTCTTTC
CTTTATTCGACGGGCAAAAGATCCCAATGATTTTTTAGTTGTGGTCTGCAATTTTACGCCGCAACCCCATAGCCATTATC
GAATTGGCATTCCAGAAGAGGGCTACTATCAAGAAATTTTGAATAGTGATGCCGAAACCTTTGGGGGGAGTAATCTACTC
AACTTCGGCGGCGTTTGGACTGAAGATTGGCGCTTCCATAATCTTCCCTATTCCATTGATCTGTGTTTGCCGCCCCTCGG
CGTGGTTGTCCTAAAAATTGATCGAGAAAAAACAGCCGCAATGCTTGCTCAAAAACAGGCCGATAAAGCCAAGGCTCTAT
CCGGCGAAATATAA

Upstream 100 bases:

>100_bases
TCTCCCTCGGATTACCCTATCCTGAGCTAGCCTTGTTCCATATCGCCAAACAAAAAAATTCCTTTAATAAACCTCTAATC
GATTTTCGGTAATTGCCATA

Downstream 100 bases:

>100_bases
AAAATAAAATTTTGTCGTTAGCTGTTGAACTATATTTACAGGGTCTGGGAGTTTGTCTCCAGACCTTTTTTTGTTGGGTT
AAAGGGGAACTGGGTATAAA

Product: glycogen branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE [H]

Number of amino acids: Translated: 777; Mature: 776

Protein sequence:

>777_residues
MPTLLTPDQINQIVSNHHDNPHAVLGCHPTNDDPNPKTWSIRAYLPSASQAWVIDTPSQTEHPMTTVHHPHFFECTLQSE
TTPKYQLKLQEGDRQHIINDPYAFAEAPHISDLDLHLFAEGNHHRIYNKLGAHLVEVDGIKGVYFAVWAPNARNVSILGD
FNNWDGRKHQMRRLNVGIWGIFIPDLGPNTKYKYEIKNQHGHIYEKSDPYGFLREVRPDTASIVADLDQYQWQDHDWLEQ
RAKQDPLKNPVSIYELHLGSWLHGSATEKMQLLSGEVDPIPVGDQKPGARFLSYYELVDKLIPYVKDMGYTHIELLPVAE
HPFDGSWGYQVTGYYSPTSRFGNPEDLMYFIDQCHANGIGVIVDWVPGHFPKDAHGLAYFDGTHLYEHADPRKGEHKGWG
TLIFNYNRNEVRNFLIANALFWFDKYHIDGIRVDAVASMLYLDYDREDGEWLPNDYGGNEHLEAVEFLRQTNNLIFKYYP
GIISVAEESTAWPMVSRPTYLGGLGFNLKWNMGWMHDNLKYFSMDPWFRQHHQNSITFSMWYHHSENYMLALSHDEVVHG
KSSIIGKMPGDEWQKFANVRALFAYMFTHPGKKTMFMSMEFGQWNEWNVWSDLSWDLLQHEPHAKLKGFFGALNSLYKQE
PALYERDFEEEGFQWIDCSDNQNSVLSFIRRAKDPNDFLVVVCNFTPQPHSHYRIGIPEEGYYQEILNSDAETFGGSNLL
NFGGVWTEDWRFHNLPYSIDLCLPPLGVVVLKIDREKTAAMLAQKQADKAKALSGEI

Sequences:

>Translated_777_residues
MPTLLTPDQINQIVSNHHDNPHAVLGCHPTNDDPNPKTWSIRAYLPSASQAWVIDTPSQTEHPMTTVHHPHFFECTLQSE
TTPKYQLKLQEGDRQHIINDPYAFAEAPHISDLDLHLFAEGNHHRIYNKLGAHLVEVDGIKGVYFAVWAPNARNVSILGD
FNNWDGRKHQMRRLNVGIWGIFIPDLGPNTKYKYEIKNQHGHIYEKSDPYGFLREVRPDTASIVADLDQYQWQDHDWLEQ
RAKQDPLKNPVSIYELHLGSWLHGSATEKMQLLSGEVDPIPVGDQKPGARFLSYYELVDKLIPYVKDMGYTHIELLPVAE
HPFDGSWGYQVTGYYSPTSRFGNPEDLMYFIDQCHANGIGVIVDWVPGHFPKDAHGLAYFDGTHLYEHADPRKGEHKGWG
TLIFNYNRNEVRNFLIANALFWFDKYHIDGIRVDAVASMLYLDYDREDGEWLPNDYGGNEHLEAVEFLRQTNNLIFKYYP
GIISVAEESTAWPMVSRPTYLGGLGFNLKWNMGWMHDNLKYFSMDPWFRQHHQNSITFSMWYHHSENYMLALSHDEVVHG
KSSIIGKMPGDEWQKFANVRALFAYMFTHPGKKTMFMSMEFGQWNEWNVWSDLSWDLLQHEPHAKLKGFFGALNSLYKQE
PALYERDFEEEGFQWIDCSDNQNSVLSFIRRAKDPNDFLVVVCNFTPQPHSHYRIGIPEEGYYQEILNSDAETFGGSNLL
NFGGVWTEDWRFHNLPYSIDLCLPPLGVVVLKIDREKTAAMLAQKQADKAKALSGEI
>Mature_776_residues
PTLLTPDQINQIVSNHHDNPHAVLGCHPTNDDPNPKTWSIRAYLPSASQAWVIDTPSQTEHPMTTVHHPHFFECTLQSET
TPKYQLKLQEGDRQHIINDPYAFAEAPHISDLDLHLFAEGNHHRIYNKLGAHLVEVDGIKGVYFAVWAPNARNVSILGDF
NNWDGRKHQMRRLNVGIWGIFIPDLGPNTKYKYEIKNQHGHIYEKSDPYGFLREVRPDTASIVADLDQYQWQDHDWLEQR
AKQDPLKNPVSIYELHLGSWLHGSATEKMQLLSGEVDPIPVGDQKPGARFLSYYELVDKLIPYVKDMGYTHIELLPVAEH
PFDGSWGYQVTGYYSPTSRFGNPEDLMYFIDQCHANGIGVIVDWVPGHFPKDAHGLAYFDGTHLYEHADPRKGEHKGWGT
LIFNYNRNEVRNFLIANALFWFDKYHIDGIRVDAVASMLYLDYDREDGEWLPNDYGGNEHLEAVEFLRQTNNLIFKYYPG
IISVAEESTAWPMVSRPTYLGGLGFNLKWNMGWMHDNLKYFSMDPWFRQHHQNSITFSMWYHHSENYMLALSHDEVVHGK
SSIIGKMPGDEWQKFANVRALFAYMFTHPGKKTMFMSMEFGQWNEWNVWSDLSWDLLQHEPHAKLKGFFGALNSLYKQEP
ALYERDFEEEGFQWIDCSDNQNSVLSFIRRAKDPNDFLVVVCNFTPQPHSHYRIGIPEEGYYQEILNSDAETFGGSNLLN
FGGVWTEDWRFHNLPYSIDLCLPPLGVVVLKIDREKTAAMLAQKQADKAKALSGEI

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=673, Percent_Identity=27.0430906389302, Blast_Score=189, Evalue=7e-48,
Organism=Escherichia coli, GI1789839, Length=761, Percent_Identity=46.1235216819974, Blast_Score=681, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17554896, Length=635, Percent_Identity=26.1417322834646, Blast_Score=182, Evalue=5e-46,
Organism=Caenorhabditis elegans, GI32564391, Length=608, Percent_Identity=25.6578947368421, Blast_Score=160, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6320826, Length=392, Percent_Identity=31.6326530612245, Blast_Score=177, Evalue=4e-45,
Organism=Drosophila melanogaster, GI28573410, Length=627, Percent_Identity=30.3030303030303, Blast_Score=232, Evalue=6e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 89783; Mature: 89651

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLLTPDQINQIVSNHHDNPHAVLGCHPTNDDPNPKTWSIRAYLPSASQAWVIDTPSQT
CCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEECCCCC
EHPMTTVHHPHFFECTLQSETTPKYQLKLQEGDRQHIINDPYAFAEAPHISDLDLHLFAE
CCCCEEECCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCHHHCCCCCCCCCEEEEEEC
GNHHRIYNKLGAHLVEVDGIKGVYFAVWAPNARNVSILGDFNNWDGRKHQMRRLNVGIWG
CCCHHHHHHHCCEEEEECCCCEEEEEEECCCCCCEEEEECCCCCCCHHHHHHEECEEEEE
IFIPDLGPNTKYKYEIKNQHGHIYEKSDPYGFLREVRPDTASIVADLDQYQWQDHDWLEQ
EECCCCCCCCEEEEEEECCCCCEEECCCCHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHH
RAKQDPLKNPVSIYELHLGSWLHGSATEKMQLLSGEVDPIPVGDQKPGARFLSYYELVDK
HHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
LIPYVKDMGYTHIELLPVAEHPFDGSWGYQVTGYYSPTSRFGNPEDLMYFIDQCHANGIG
HHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEEECCHHCCCCHHHHHHHHHHHCCCCEE
VIVDWVPGHFPKDAHGLAYFDGTHLYEHADPRKGEHKGWGTLIFNYNRNEVRNFLIANAL
EEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHH
FWFDKYHIDGIRVDAVASMLYLDYDREDGEWLPNDYGGNEHLEAVEFLRQTNNLIFKYYP
HHHHHEEECCEEHHHHHEEHEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECC
GIISVAEESTAWPMVSRPTYLGGLGFNLKWNMGWMHDNLKYFSMDPWFRQHHQNSITFSM
CEEEECCCCCCCCCCCCCCEECCCCEEEEEECCEEECCCEEEECCHHHHHHCCCCEEEEE
WYHHSENYMLALSHDEVVHGKSSIIGKMPGDEWQKFANVRALFAYMFTHPGKKTMFMSME
EEEECCCEEEEEECCCEECCCHHHEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
FGQWNEWNVWSDLSWDLLQHEPHAKLKGFFGALNSLYKQEPALYERDFEEEGFQWIDCSD
CCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCEEEECCC
NQNSVLSFIRRAKDPNDFLVVVCNFTPQPHSHYRIGIPEEGYYQEILNSDAETFGGSNLL
CHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEECCCCCHHHHHHHCCCHHHCCCCCEE
NFGGVWTEDWRFHNLPYSIDLCLPPLGVVVLKIDREKTAAMLAQKQADKAKALSGEI
CCCCEECCCCEECCCCEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PTLLTPDQINQIVSNHHDNPHAVLGCHPTNDDPNPKTWSIRAYLPSASQAWVIDTPSQT
CCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEECCCCC
EHPMTTVHHPHFFECTLQSETTPKYQLKLQEGDRQHIINDPYAFAEAPHISDLDLHLFAE
CCCCEEECCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCHHHCCCCCCCCCEEEEEEC
GNHHRIYNKLGAHLVEVDGIKGVYFAVWAPNARNVSILGDFNNWDGRKHQMRRLNVGIWG
CCCHHHHHHHCCEEEEECCCCEEEEEEECCCCCCEEEEECCCCCCCHHHHHHEECEEEEE
IFIPDLGPNTKYKYEIKNQHGHIYEKSDPYGFLREVRPDTASIVADLDQYQWQDHDWLEQ
EECCCCCCCCEEEEEEECCCCCEEECCCCHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHH
RAKQDPLKNPVSIYELHLGSWLHGSATEKMQLLSGEVDPIPVGDQKPGARFLSYYELVDK
HHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
LIPYVKDMGYTHIELLPVAEHPFDGSWGYQVTGYYSPTSRFGNPEDLMYFIDQCHANGIG
HHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEEECCHHCCCCHHHHHHHHHHHCCCCEE
VIVDWVPGHFPKDAHGLAYFDGTHLYEHADPRKGEHKGWGTLIFNYNRNEVRNFLIANAL
EEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHH
FWFDKYHIDGIRVDAVASMLYLDYDREDGEWLPNDYGGNEHLEAVEFLRQTNNLIFKYYP
HHHHHEEECCEEHHHHHEEHEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECC
GIISVAEESTAWPMVSRPTYLGGLGFNLKWNMGWMHDNLKYFSMDPWFRQHHQNSITFSM
CEEEECCCCCCCCCCCCCCEECCCCEEEEEECCEEECCCEEEECCHHHHHHCCCCEEEEE
WYHHSENYMLALSHDEVVHGKSSIIGKMPGDEWQKFANVRALFAYMFTHPGKKTMFMSME
EEEECCCEEEEEECCCEECCCHHHEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
FGQWNEWNVWSDLSWDLLQHEPHAKLKGFFGALNSLYKQEPALYERDFEEEGFQWIDCSD
CCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCEEEECCC
NQNSVLSFIRRAKDPNDFLVVVCNFTPQPHSHYRIGIPEEGYYQEILNSDAETFGGSNLL
CHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEECCCCCHHHHHHHCCCHHHCCCCCEE
NFGGVWTEDWRFHNLPYSIDLCLPPLGVVVLKIDREKTAAMLAQKQADKAKALSGEI
CCCCEECCCCEECCCCEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]