| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078468
Identifier: 170078468
GI number: 170078468
Start: 1951742
End: 1953544
Strand: Direct
Name: 170078468
Synonym: SYNPCC7002_A1862
Alternate gene names: NA
Gene position: 1951742-1953544 (Clockwise)
Preceding gene: 170078467
Following gene: 170078469
Centisome position: 64.88
GC content: 51.03
Gene sequence:
>1803_bases ATGGTTCACACGGCAACTTCCATGGCAACGCCAGCCCCAAGCGCGCAAAATACGGTGGCGATCGCCTATCAAGTGGCAAT GCCCCAGCCCCAAACCCACCTGTTTGAGGTAACCATTCACATTAGCCAATGGGAAGCCGCAGTGCTGGATCTAAAAATGC CCGTATGGACGCCTGGCTCTTATATGGTGCGCGAATATTCCCGCCATCTCCAGGATTTTCGGGCGACTACAGCGGCAGGT GTTGACCTCAGTTGGCGCAAAGTGACGAAAAACCACTGGCAAGTTGAAACCGCTGACACCTCAGACATCCAAGTCCACTA TCGGGTCTTTGCCAATGACCTCACCGTCCGCACCAATCACCTTGATAGTACCCACGGTTATTTCAACGGTGCGGCTTTAT TTTGCTTTATTCCGGGCTACCAAGACCAAGCTTGTACCTTGACCGTCGAACCGCCCCACATCGCCTGGGAAGTAAATACC ACCTTGCCCCTGATCGAAGACCAGGAAAATTGTTTCTGGGTCGAAAATTTTGATGTGTTGGTGGATAGTCCTGTGGAGGT GGGTCTCCACGAAAATTATGAGTTCCTCTGTGAAGGGAAGCCCCACCGTTGGGTCGTTTGGGGGGAAGGCAATTTTGAAG CGGAAAAGGCGATCGCCGATACCAAAAAAATCATCCAGACCGAAGCCAAAATTTTCGGCGGTGAGTTGCCCTACGACGAA TATATGTTTTTGTTGCACCTGTCCGGCAGTGGCTATGGGGGCCTCGAACATAAAGAAAGTTGCTCTTTAAATTATCCCCG GTTTGGCTTCCAAAAATCCGACCAATACAACCGCTTTATGCAGTTGGTGGCCCACGAATTTTTCCACCTCTGGAATGTGA AGCGCATTCGCCCCAAGGAACTCGAAACCTTTGACTACGAGACAGAAAATTACACCCCTTCCCTTTGGTTTGCCGAGGGT GTGACCAGTTACTATGATCTGCTCATTCCGTTGTGGGCTGGCATCTATGACAAGACCTTTTTCCTTGAAAGCCTCAGCAA GGACATCACCCGCTATCTCCTTACCCCTGGGCGTTTGGTGCAGCCCCTGGCCGAATCGAGTTTTGATGCCTGGATTAAGC TCTACCGCCGCGAGGCCCATAGCAACAATAACCAGATGTCCTACTATCTCAAGGGTGCTCTCGTGGCGATGCTACTGGAT CTCAAAATCCGCGATCGCCACCAAAACCAAAAATCCCTAGATGATGTGTTGCGGATCATGTGGGAAAAATTTGGCAAACC AGAAATTGGCTTTACCCCGGCCCAAGTGGAGCAGGTAATTAGTGAGGTGGCGGGCTTTGACCTGAGTGACTTTTTCCACG AATTTCTCCATACCACGGCAGAACTTCCCCTCGGCGCAGCCCTTGAAACCTTCGGTCTACAAATTAAACCCGTCTACACC AACAAAGATCTCCCCTACCTGGGTCTCACCGTCACCGACCAAAACAATCGCACCCTGGTGCAAACGGTCAATGTTGATTC CCCGGCCCATCAAGCGGGCATTGATCCAGAAGATGAACTCCTGGCGATCACCAACTATCGCACCAATGCCGAACAACTCA ACCATCGCCTTCAGAACTACCAAGCAGGTGATACAATTTCGATCACGATTTTTCACCAAGACCAACTGAAAACCCTTGCC GTCACCCTCGCTGCCCCCCAACCGAGCAGTTATCAAGTCGTGAAAAATCCCCAAGCCTCTGCCAAGCAGTTGCAAAACCT CAAGGGCTGGCTGAATCCCAAAGATTCAGGTGCGGTAAGATAA
Upstream 100 bases:
>100_bases GGGAAAGGGTGGATCGAAATGGGTGAAGGTCGCATTCATTTGATCAACTTTAAACAACTGACAAATTTAGCCAACCGAGC ATAGGAGTAAATTTTTTCTG
Downstream 100 bases:
>100_bases ATTTCTTGCTTCATTGTTCTTTCTGTAATTCATTTCGCACCCTACCGTTTGCCCCCAACCCATGCATAATTTCCTTCCCA CTGCCTATTTCCAAGGAAAA
Product: M61 glycyl aminopeptidase protein
Products: NA
Alternate protein names: Peptidase M; Protease; M61 Family Peptidase; M61 Glycyl Aminopeptidase; M61 Family Glycyl Aminopeptidase; Pdz/Dhr/Glgf; Glycyl Aminopeptidase; Trypsin-Like Serine Protease; Aminopeptidase N Family Protein; Metallopeptidase; PDZ Domain-Containing Protein; PDZ Domain Family Protein; Protease With C-Terminal PDZ Domain-Containing Protein; PDZ/DHR/GLGFPeptidase M; PDZ Domain Protein; Protease With C-Terminal PDZ Domain; Glycyl Aminopeptidase Protein; Signaling Protein; M61 Glycyl Aminopeptidase Protein; M61 Glycyl Aminopeptidase Family Protein
Number of amino acids: Translated: 600; Mature: 600
Protein sequence:
>600_residues MVHTATSMATPAPSAQNTVAIAYQVAMPQPQTHLFEVTIHISQWEAAVLDLKMPVWTPGSYMVREYSRHLQDFRATTAAG VDLSWRKVTKNHWQVETADTSDIQVHYRVFANDLTVRTNHLDSTHGYFNGAALFCFIPGYQDQACTLTVEPPHIAWEVNT TLPLIEDQENCFWVENFDVLVDSPVEVGLHENYEFLCEGKPHRWVVWGEGNFEAEKAIADTKKIIQTEAKIFGGELPYDE YMFLLHLSGSGYGGLEHKESCSLNYPRFGFQKSDQYNRFMQLVAHEFFHLWNVKRIRPKELETFDYETENYTPSLWFAEG VTSYYDLLIPLWAGIYDKTFFLESLSKDITRYLLTPGRLVQPLAESSFDAWIKLYRREAHSNNNQMSYYLKGALVAMLLD LKIRDRHQNQKSLDDVLRIMWEKFGKPEIGFTPAQVEQVISEVAGFDLSDFFHEFLHTTAELPLGAALETFGLQIKPVYT NKDLPYLGLTVTDQNNRTLVQTVNVDSPAHQAGIDPEDELLAITNYRTNAEQLNHRLQNYQAGDTISITIFHQDQLKTLA VTLAAPQPSSYQVVKNPQASAKQLQNLKGWLNPKDSGAVR
Sequences:
>Translated_600_residues MVHTATSMATPAPSAQNTVAIAYQVAMPQPQTHLFEVTIHISQWEAAVLDLKMPVWTPGSYMVREYSRHLQDFRATTAAG VDLSWRKVTKNHWQVETADTSDIQVHYRVFANDLTVRTNHLDSTHGYFNGAALFCFIPGYQDQACTLTVEPPHIAWEVNT TLPLIEDQENCFWVENFDVLVDSPVEVGLHENYEFLCEGKPHRWVVWGEGNFEAEKAIADTKKIIQTEAKIFGGELPYDE YMFLLHLSGSGYGGLEHKESCSLNYPRFGFQKSDQYNRFMQLVAHEFFHLWNVKRIRPKELETFDYETENYTPSLWFAEG VTSYYDLLIPLWAGIYDKTFFLESLSKDITRYLLTPGRLVQPLAESSFDAWIKLYRREAHSNNNQMSYYLKGALVAMLLD LKIRDRHQNQKSLDDVLRIMWEKFGKPEIGFTPAQVEQVISEVAGFDLSDFFHEFLHTTAELPLGAALETFGLQIKPVYT NKDLPYLGLTVTDQNNRTLVQTVNVDSPAHQAGIDPEDELLAITNYRTNAEQLNHRLQNYQAGDTISITIFHQDQLKTLA VTLAAPQPSSYQVVKNPQASAKQLQNLKGWLNPKDSGAVR >Mature_600_residues MVHTATSMATPAPSAQNTVAIAYQVAMPQPQTHLFEVTIHISQWEAAVLDLKMPVWTPGSYMVREYSRHLQDFRATTAAG VDLSWRKVTKNHWQVETADTSDIQVHYRVFANDLTVRTNHLDSTHGYFNGAALFCFIPGYQDQACTLTVEPPHIAWEVNT TLPLIEDQENCFWVENFDVLVDSPVEVGLHENYEFLCEGKPHRWVVWGEGNFEAEKAIADTKKIIQTEAKIFGGELPYDE YMFLLHLSGSGYGGLEHKESCSLNYPRFGFQKSDQYNRFMQLVAHEFFHLWNVKRIRPKELETFDYETENYTPSLWFAEG VTSYYDLLIPLWAGIYDKTFFLESLSKDITRYLLTPGRLVQPLAESSFDAWIKLYRREAHSNNNQMSYYLKGALVAMLLD LKIRDRHQNQKSLDDVLRIMWEKFGKPEIGFTPAQVEQVISEVAGFDLSDFFHEFLHTTAELPLGAALETFGLQIKPVYT NKDLPYLGLTVTDQNNRTLVQTVNVDSPAHQAGIDPEDELLAITNYRTNAEQLNHRLQNYQAGDTISITIFHQDQLKTLA VTLAAPQPSSYQVVKNPQASAKQLQNLKGWLNPKDSGAVR
Specific function: Unknown
COG id: COG3975
COG function: function code R; Predicted protease with the C-terminal PDZ domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68533; Mature: 68533
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVHTATSMATPAPSAQNTVAIAYQVAMPQPQTHLFEVTIHISQWEAAVLDLKMPVWTPGS CCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCEEEEEEECCCCCCCH YMVREYSRHLQDFRATTAAGVDLSWRKVTKNHWQVETADTSDIQVHYRVFANDLTVRTNH HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEEECCCCCEEEEEEEEECCEEEEECC LDSTHGYFNGAALFCFIPGYQDQACTLTVEPPHIAWEVNTTLPLIEDQENCFWVENFDVL CCCCCCCCCCEEEEEEECCCCCCEEEEEECCCEEEEEECCCCCEEECCCCEEEEECCEEE VDSPVEVGLHENYEFLCEGKPHRWVVWGEGNFEAEKAIADTKKIIQTEAKIFGGELPYDE ECCCEEECCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC YMFLLHLSGSGYGGLEHKESCSLNYPRFGFQKSDQYNRFMQLVAHEFFHLWNVKRIRPKE EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC LETFDYETENYTPSLWFAEGVTSYYDLLIPLWAGIYDKTFFLESLSKDITRYLLTPGRLV CCEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH QPLAESSFDAWIKLYRREAHSNNNQMSYYLKGALVAMLLDLKIRDRHQNQKSLDDVLRIM HHHHHCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH WEKFGKPEIGFTPAQVEQVISEVAGFDLSDFFHEFLHTTAELPLGAALETFGLQIKPVYT HHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHCCEEEEEEE NKDLPYLGLTVTDQNNRTLVQTVNVDSPAHQAGIDPEDELLAITNYRTNAEQLNHRLQNY CCCCCEEEEEEECCCCCEEEEEECCCCCHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCC QAGDTISITIFHQDQLKTLAVTLAAPQPSSYQVVKNPQASAKQLQNLKGWLNPKDSGAVR CCCCEEEEEEEECCCCEEEEEEEECCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MVHTATSMATPAPSAQNTVAIAYQVAMPQPQTHLFEVTIHISQWEAAVLDLKMPVWTPGS CCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCEEEEEEECCCCCCCH YMVREYSRHLQDFRATTAAGVDLSWRKVTKNHWQVETADTSDIQVHYRVFANDLTVRTNH HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEEECCCCCEEEEEEEEECCEEEEECC LDSTHGYFNGAALFCFIPGYQDQACTLTVEPPHIAWEVNTTLPLIEDQENCFWVENFDVL CCCCCCCCCCEEEEEEECCCCCCEEEEEECCCEEEEEECCCCCEEECCCCEEEEECCEEE VDSPVEVGLHENYEFLCEGKPHRWVVWGEGNFEAEKAIADTKKIIQTEAKIFGGELPYDE ECCCEEECCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC YMFLLHLSGSGYGGLEHKESCSLNYPRFGFQKSDQYNRFMQLVAHEFFHLWNVKRIRPKE EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC LETFDYETENYTPSLWFAEGVTSYYDLLIPLWAGIYDKTFFLESLSKDITRYLLTPGRLV CCEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH QPLAESSFDAWIKLYRREAHSNNNQMSYYLKGALVAMLLDLKIRDRHQNQKSLDDVLRIM HHHHHCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH WEKFGKPEIGFTPAQVEQVISEVAGFDLSDFFHEFLHTTAELPLGAALETFGLQIKPVYT HHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHCCEEEEEEE NKDLPYLGLTVTDQNNRTLVQTVNVDSPAHQAGIDPEDELLAITNYRTNAEQLNHRLQNY CCCCCEEEEEEECCCCCEEEEEECCCCCHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCC QAGDTISITIFHQDQLKTLAVTLAAPQPSSYQVVKNPQASAKQLQNLKGWLNPKDSGAVR CCCCEEEEEEEECCCCEEEEEEEECCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA