Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078459

Identifier: 170078459

GI number: 170078459

Start: 1940317

End: 1941555

Strand: Reverse

Name: 170078459

Synonym: SYNPCC7002_A1853

Alternate gene names: NA

Gene position: 1941555-1940317 (Counterclockwise)

Preceding gene: 170078460

Following gene: 170078456

Centisome position: 64.55

GC content: 50.04

Gene sequence:

>1239_bases
ATGCGGATTTTATGTCTCAGTAATGGCCACGGAGAAGATGTGATCGCCGTCCAAATCCTCAGCGCCATCCAAGCCCAAAA
CCCAGAGGTGAGCCTCGCTGCGTTGCCTATTGTTGGTACAGGTCATGCCTACCAAAAGTTAGATATACCAATCATTGGTC
GTACCCAGCAAATGCCTTCTGGGGGGTTTGTTTATATGGATAATCGGCAATTAATGCGGGATCTTAAAGGGGGTTTACTG
CAGCTCACTTGGCAACAATATCAGGCTGTGAAACGCTGGAAAAACCAAGGACAAGAAAAGTCCTTAATTCTTGCGGTGGG
TGATATTGTCCCGCTCATTTTTGCTTGGCTCAGTGGTTGCCGATATGCTTTTGTGGGGACAGCAAAGTCAGAATATTATT
TGCGCGATCGCCAGGGAAATTGGCTCCCGAAAACTTCTGCCCTCGAAAAGTGGTTTGGGTCAGTTTATTTGCCCTGGGAA
CGGTGGCTGCTCAGTCGGAAAAATTGTGTCGCTGTCTATCCGCGCGATCGCCTCACCACCGATGTTTTAACAACCTACAA
GATTCCCGCCGTAAATTTGGGGAACCCAATGATGGATGGCCTCGAACCTCCTGAAAATTTGCCCCAGAAGGAAACAAAAC
AAACTTTGACCTTTGTCTTGCTGCCCGGTTCGCGCCCCCCGGAAGCCCTACACAATTGGCAAAAAATTCTCCAAGCCGCA
CAATTATTTGTGGAAAAGTACCAGGCGGTGAATTTTATGGCGGCGATCGCCCCTAGTCTCGACCCAAAAGAATTCTTCGA
CTGTTTGTCCTCTTTAGGTTGGCAAAAACTCGATTCCCAGCCCACTGAACTCACGTTTGGTGATCCTGAAGCCCAGGTTT
TCCAGCAAAATAAAGCTCAGCTTGTCTTCACCCAACATCGCTATGCCGAAAGTTTGCACTGTGCTGATTTGGCGATCGCC
ATGGCGGGTACGGCCACCGAACAATTTGTTGGCCTGGGAAAGCCTGCTTTGACCATCGTCGGTGCTGGCCCCCAATTTAC
CCCGGCCTTCGCTGAGGCCCAAACCCGGCTCCTGGGAGAATCCGTGCTTCTTTGTTCTCGCCCCAAAGCCGTTCCTGATA
AAGTAGATTTTTTGCTGAGTCATCCTGATTTACTCCAGGCGATCGCCATCAACGGCCAAGAACGCATGGGTACGGCTGGT
GCAGCGAACCGTATCGCTAGTCATCTTTTGGCACTTTAA

Upstream 100 bases:

>100_bases
CTGGACAACGTTGATTTCTCTCGACAGTGACCACAGTTTAGGTAATTGCTTAGACACGCTTGTGCAAGAAACAAAACAGT
TTTTATTTGGGGGTTAACCG

Downstream 100 bases:

>100_bases
TATTTAGAGAAGAAACAACCTAAACGGGATTGAGGCGTGGGAAACGATTCTCTGCCTGGAGCGCCTGATAAAAAGTTGTC
ACCTCTGCCGTGGGCAACCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MRILCLSNGHGEDVIAVQILSAIQAQNPEVSLAALPIVGTGHAYQKLDIPIIGRTQQMPSGGFVYMDNRQLMRDLKGGLL
QLTWQQYQAVKRWKNQGQEKSLILAVGDIVPLIFAWLSGCRYAFVGTAKSEYYLRDRQGNWLPKTSALEKWFGSVYLPWE
RWLLSRKNCVAVYPRDRLTTDVLTTYKIPAVNLGNPMMDGLEPPENLPQKETKQTLTFVLLPGSRPPEALHNWQKILQAA
QLFVEKYQAVNFMAAIAPSLDPKEFFDCLSSLGWQKLDSQPTELTFGDPEAQVFQQNKAQLVFTQHRYAESLHCADLAIA
MAGTATEQFVGLGKPALTIVGAGPQFTPAFAEAQTRLLGESVLLCSRPKAVPDKVDFLLSHPDLLQAIAINGQERMGTAG
AANRIASHLLAL

Sequences:

>Translated_412_residues
MRILCLSNGHGEDVIAVQILSAIQAQNPEVSLAALPIVGTGHAYQKLDIPIIGRTQQMPSGGFVYMDNRQLMRDLKGGLL
QLTWQQYQAVKRWKNQGQEKSLILAVGDIVPLIFAWLSGCRYAFVGTAKSEYYLRDRQGNWLPKTSALEKWFGSVYLPWE
RWLLSRKNCVAVYPRDRLTTDVLTTYKIPAVNLGNPMMDGLEPPENLPQKETKQTLTFVLLPGSRPPEALHNWQKILQAA
QLFVEKYQAVNFMAAIAPSLDPKEFFDCLSSLGWQKLDSQPTELTFGDPEAQVFQQNKAQLVFTQHRYAESLHCADLAIA
MAGTATEQFVGLGKPALTIVGAGPQFTPAFAEAQTRLLGESVLLCSRPKAVPDKVDFLLSHPDLLQAIAINGQERMGTAG
AANRIASHLLAL
>Mature_412_residues
MRILCLSNGHGEDVIAVQILSAIQAQNPEVSLAALPIVGTGHAYQKLDIPIIGRTQQMPSGGFVYMDNRQLMRDLKGGLL
QLTWQQYQAVKRWKNQGQEKSLILAVGDIVPLIFAWLSGCRYAFVGTAKSEYYLRDRQGNWLPKTSALEKWFGSVYLPWE
RWLLSRKNCVAVYPRDRLTTDVLTTYKIPAVNLGNPMMDGLEPPENLPQKETKQTLTFVLLPGSRPPEALHNWQKILQAA
QLFVEKYQAVNFMAAIAPSLDPKEFFDCLSSLGWQKLDSQPTELTFGDPEAQVFQQNKAQLVFTQHRYAESLHCADLAIA
MAGTATEQFVGLGKPALTIVGAGPQFTPAFAEAQTRLLGESVLLCSRPKAVPDKVDFLLSHPDLLQAIAINGQERMGTAG
AANRIASHLLAL

Specific function: Unknown

COG id: COG4370

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45642; Mature: 45642

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILCLSNGHGEDVIAVQILSAIQAQNPEVSLAALPIVGTGHAYQKLDIPIIGRTQQMPS
CEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEECCEEECCCCCCCC
GGFVYMDNRQLMRDLKGGLLQLTWQQYQAVKRWKNQGQEKSLILAVGDIVPLIFAWLSGC
CCEEEECCHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCC
RYAFVGTAKSEYYLRDRQGNWLPKTSALEKWFGSVYLPWERWLLSRKNCVAVYPRDRLTT
CEEEEECCCCCEEEECCCCCCCCCHHHHHHHHCCEECCHHHHHHCCCCEEEECCCCCCHH
DVLTTYKIPAVNLGNPMMDGLEPPENLPQKETKQTLTFVLLPGSRPPEALHNWQKILQAA
HHHHEEECCEECCCCHHHCCCCCCCCCCHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHH
QLFVEKYQAVNFMAAIAPSLDPKEFFDCLSSLGWQKLDSQPTELTFGDPEAQVFQQNKAQ
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHCCCCCEEECCCCHHHHHHCCCCE
LVFTQHRYAESLHCADLAIAMAGTATEQFVGLGKPALTIVGAGPQFTPAFAEAQTRLLGE
EEEEHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHH
SVLLCSRPKAVPDKVDFLLSHPDLLQAIAINGQERMGTAGAANRIASHLLAL
HHEEECCCCCCCHHHHHHHCCHHHHHHHHCCCHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MRILCLSNGHGEDVIAVQILSAIQAQNPEVSLAALPIVGTGHAYQKLDIPIIGRTQQMPS
CEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEECCEEECCCCCCCC
GGFVYMDNRQLMRDLKGGLLQLTWQQYQAVKRWKNQGQEKSLILAVGDIVPLIFAWLSGC
CCEEEECCHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCC
RYAFVGTAKSEYYLRDRQGNWLPKTSALEKWFGSVYLPWERWLLSRKNCVAVYPRDRLTT
CEEEEECCCCCEEEECCCCCCCCCHHHHHHHHCCEECCHHHHHHCCCCEEEECCCCCCHH
DVLTTYKIPAVNLGNPMMDGLEPPENLPQKETKQTLTFVLLPGSRPPEALHNWQKILQAA
HHHHEEECCEECCCCHHHCCCCCCCCCCHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHH
QLFVEKYQAVNFMAAIAPSLDPKEFFDCLSSLGWQKLDSQPTELTFGDPEAQVFQQNKAQ
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHCCCCCEEECCCCHHHHHHCCCCE
LVFTQHRYAESLHCADLAIAMAGTATEQFVGLGKPALTIVGAGPQFTPAFAEAQTRLLGE
EEEEHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHH
SVLLCSRPKAVPDKVDFLLSHPDLLQAIAINGQERMGTAGAANRIASHLLAL
HHEEECCCCCCCHHHHHHHCCHHHHHHHHCCCHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA