Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078416

Identifier: 170078416

GI number: 170078416

Start: 1897960

End: 1898760

Strand: Direct

Name: 170078416

Synonym: SYNPCC7002_A1810

Alternate gene names: NA

Gene position: 1897960-1898760 (Clockwise)

Preceding gene: 170078415

Following gene: 170078421

Centisome position: 63.1

GC content: 46.44

Gene sequence:

>801_bases
TTGCCGCGCCTTCATCCTCAAATTTTCCGCTTATCCTTGCATATGCCGCCAACCCTCCTTTCCACAAAGCCGATCATCGC
GCAACAACCCACATCGATTACAACCTCAGATCGACCGATCTTTGGTGGCATTGCCCCATGGATTATTCTCGCCTCAGCCT
TTTTCTGTAGCACCCTAGGGCTTCTGTTCTATATTCGTGGCATTAATCAAAAGCATAAAAAAGAAGCCAAGCTCAATCGT
TACAAAATTAACGATCTCAAGAAAAAACTCAAACTGGCCCTGAGCACAATCAAGAAAATGGAAAGTAACCCGGACTTGGT
ACACTCCCGGGAGTTTAACCTCGATTACCTCCGGATGCGGATGGAAGAAGATCAGTTCCACTACGTGATTGTGAACCAGC
TCAAAATTAAGGTGCGTCTAATTATTAGCGTTGCCCTACGCCCCAGTACCGCCGATGTAGCCACTGTGGGGATCGCCACC
AGTGGTCGCCCCGTAGACGAAATTTTTGACGTTTATTACGACACAATTAATCGAGAAGGTCAACGCCAGGAAGGGGTCTT
ATTTCGCGTCAATATTAGCCTTACAAAACTTCCCGCCCAAGCTAGCAGCATCACTGTTGAACAAATTATTGATTGTCTCG
AAAAATTTCTCAATCCCAGTGAAGCTCCTGACTATTGGCAGCCTACGGTGCAAGGGCGTGTCGTCACCATTGAATGGGAT
CAAAAAGCAAAACCCACACCGCTACTCCTCTTTAAACAGTCAGAAGAAGGAGACAATGTGAGTTTTCGTAGTATTGCCTG
A

Upstream 100 bases:

>100_bases
TTTCCGCTAATTGTGGCCTGTGAACTCTCCATAGTTCTAAATTTTTTCTATACTTCTGGAAACAGACCCTACCGACCCTT
GCTAATCTGTTAGTAACTTT

Downstream 100 bases:

>100_bases
TGATCTCTAGCAGTTAGCGAAAATTAGGGAGATTTGAGAAGTATGCTTCATTAACTACCCATGCTGGTAAAGAAATCAAT
GGTGTCCTTCAGGGCAGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MPRLHPQIFRLSLHMPPTLLSTKPIIAQQPTSITTSDRPIFGGIAPWIILASAFFCSTLGLLFYIRGINQKHKKEAKLNR
YKINDLKKKLKLALSTIKKMESNPDLVHSREFNLDYLRMRMEEDQFHYVIVNQLKIKVRLIISVALRPSTADVATVGIAT
SGRPVDEIFDVYYDTINREGQRQEGVLFRVNISLTKLPAQASSITVEQIIDCLEKFLNPSEAPDYWQPTVQGRVVTIEWD
QKAKPTPLLLFKQSEEGDNVSFRSIA

Sequences:

>Translated_266_residues
MPRLHPQIFRLSLHMPPTLLSTKPIIAQQPTSITTSDRPIFGGIAPWIILASAFFCSTLGLLFYIRGINQKHKKEAKLNR
YKINDLKKKLKLALSTIKKMESNPDLVHSREFNLDYLRMRMEEDQFHYVIVNQLKIKVRLIISVALRPSTADVATVGIAT
SGRPVDEIFDVYYDTINREGQRQEGVLFRVNISLTKLPAQASSITVEQIIDCLEKFLNPSEAPDYWQPTVQGRVVTIEWD
QKAKPTPLLLFKQSEEGDNVSFRSIA
>Mature_265_residues
PRLHPQIFRLSLHMPPTLLSTKPIIAQQPTSITTSDRPIFGGIAPWIILASAFFCSTLGLLFYIRGINQKHKKEAKLNRY
KINDLKKKLKLALSTIKKMESNPDLVHSREFNLDYLRMRMEEDQFHYVIVNQLKIKVRLIISVALRPSTADVATVGIATS
GRPVDEIFDVYYDTINREGQRQEGVLFRVNISLTKLPAQASSITVEQIIDCLEKFLNPSEAPDYWQPTVQGRVVTIEWDQ
KAKPTPLLLFKQSEEGDNVSFRSIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30350; Mature: 30219

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLHPQIFRLSLHMPPTLLSTKPIIAQQPTSITTSDRPIFGGIAPWIILASAFFCSTLG
CCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LLFYIRGINQKHKKEAKLNRYKINDLKKKLKLALSTIKKMESNPDLVHSREFNLDYLRMR
HHHHHHCCCHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHEE
MEEDQFHYVIVNQLKIKVRLIISVALRPSTADVATVGIATSGRPVDEIFDVYYDTINREG
CCCCCEEEEEEEEEEEEEEEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCC
QRQEGVLFRVNISLTKLPAQASSITVEQIIDCLEKFLNPSEAPDYWQPTVQGRVVTIEWD
CCCCCEEEEEEEEEEECCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEC
QKAKPTPLLLFKQSEEGDNVSFRSIA
CCCCCCEEEEEEECCCCCCCEEEECC
>Mature Secondary Structure 
PRLHPQIFRLSLHMPPTLLSTKPIIAQQPTSITTSDRPIFGGIAPWIILASAFFCSTLG
CCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LLFYIRGINQKHKKEAKLNRYKINDLKKKLKLALSTIKKMESNPDLVHSREFNLDYLRMR
HHHHHHCCCHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHEE
MEEDQFHYVIVNQLKIKVRLIISVALRPSTADVATVGIATSGRPVDEIFDVYYDTINREG
CCCCCEEEEEEEEEEEEEEEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCC
QRQEGVLFRVNISLTKLPAQASSITVEQIIDCLEKFLNPSEAPDYWQPTVQGRVVTIEWD
CCCCCEEEEEEEEEEECCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEC
QKAKPTPLLLFKQSEEGDNVSFRSIA
CCCCCCEEEEEEECCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA