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The map label for this gene is 170078421

Identifier: 170078421

GI number: 170078421

Start: 1903932

End: 1904606

Strand: Direct

Name: 170078421

Synonym: SYNPCC7002_A1815

Alternate gene names: NA

Gene position: 1903932-1904606 (Clockwise)

Preceding gene: 170078416

Following gene: 170078425

Centisome position: 63.29

GC content: 50.07

Gene sequence:

>675_bases
TTGTCTAACGGCTTATCCATGACCCTTTCTGACACCCGCGCCGAAACCCGTTCAACGAAGCATGACATTTTGGAATATTT
ATTGAAACATGGTCAAGTTAAGGCTGTGCAGTTGGCGAAATCTTTACAAATTAGCCCCCAGGCGGTGCGACGTCACCTGA
AAGATCTAGAAGAAGAAGGCCTCATTGAACACCGGGCAAAGCAGGAGGGTTTGGGGCGTCCTAATTATTTTTATGGTCTG
AGTCGGGCCGGCCGCGATCGCTTTCCGAACCGCTATAACGATTTTGCGGTATCTTTTTTGGATACCTTAGCAGAGACGGC
GGGAGAAGAGCAGGTCAAGGAAGTGCTCCGCAAACAATGGCAAAAGAAGGCCCACAGTTACCGCGATCGCCTTGGGGATG
GTTCTTTGCCAGAGCGTTTAGCCCGTTTGGTCAATTTACGCAAAGAAGAAGGCTACATGGCGGAGGTCATTCCGGCGACA
GACCATGGTCATGACGGTTTTTTATTGACGGAACATCATTGTGCGATCGCCGATGTGGCCGAATCCTTCCCGGTGGTCTG
TGGTAATGAATTAGAAATGTTCGAAGAAGTTTTGCCCGACTGCACTGTGACTCGCACCCAGTGGATCAACGAAGGGGAAC
ACCAGTGCGGCTACATCATCCAAGCCAAAGATTAA

Upstream 100 bases:

>100_bases
AGAAAACGCGATATGATTAGTTTAACAACTGTTTGGTTGTTTTAGTTTCTATTCAAGGTACTTTAACAACAAAAAAGTTG
TCAAATATTTGTGGTAGATC

Downstream 100 bases:

>100_bases
CCAAACAAAAATATTAGCTCTGGCATTGGGGACAGAAATGGGTTGATCGTCCGCCGAGTTTGATCCGTTCGATGGGATGA
CTGCAAACACGACAAGGTTC

Product: sugar-specific transcriptional regulator, TrmB

Products: NA

Alternate protein names: ArsR Family Transcriptional Regulator; Transcriptional Regulator TrmB; Transcriptional Regulatory Protein; Regulatory Protein ArsR; DeoR Family Transcriptional Regulator; HTH Domain Family; Transcriptional Regulator ArsR Family; Helix-Turn-Helix Type; Sugar-Specific Transcriptional Regulator TrmB; HTH Domain Family Protein; Transcription Regulator Protein; ArsR Transcriptional Regulator; MarR Family Transcriptional Regulator; SufR Family Transcriptional Regulator; Regulatory Proteins AsnC Family Protein; Transcriptional Regulator Protein; Transcriptional Regulator DeoR Family; Arsr Family Transcriptional Regulator; Transcription Regulator; ArsR Family Regulator; Iron-Sulfur Cluster Biosynthesis Transcriptional Regulator; ParR Family Transcriptional Regulator

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MSNGLSMTLSDTRAETRSTKHDILEYLLKHGQVKAVQLAKSLQISPQAVRRHLKDLEEEGLIEHRAKQEGLGRPNYFYGL
SRAGRDRFPNRYNDFAVSFLDTLAETAGEEQVKEVLRKQWQKKAHSYRDRLGDGSLPERLARLVNLRKEEGYMAEVIPAT
DHGHDGFLLTEHHCAIADVAESFPVVCGNELEMFEEVLPDCTVTRTQWINEGEHQCGYIIQAKD

Sequences:

>Translated_224_residues
MSNGLSMTLSDTRAETRSTKHDILEYLLKHGQVKAVQLAKSLQISPQAVRRHLKDLEEEGLIEHRAKQEGLGRPNYFYGL
SRAGRDRFPNRYNDFAVSFLDTLAETAGEEQVKEVLRKQWQKKAHSYRDRLGDGSLPERLARLVNLRKEEGYMAEVIPAT
DHGHDGFLLTEHHCAIADVAESFPVVCGNELEMFEEVLPDCTVTRTQWINEGEHQCGYIIQAKD
>Mature_223_residues
SNGLSMTLSDTRAETRSTKHDILEYLLKHGQVKAVQLAKSLQISPQAVRRHLKDLEEEGLIEHRAKQEGLGRPNYFYGLS
RAGRDRFPNRYNDFAVSFLDTLAETAGEEQVKEVLRKQWQKKAHSYRDRLGDGSLPERLARLVNLRKEEGYMAEVIPATD
HGHDGFLLTEHHCAIADVAESFPVVCGNELEMFEEVLPDCTVTRTQWINEGEHQCGYIIQAKD

Specific function: Unknown

COG id: COG2345

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25520; Mature: 25389

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNGLSMTLSDTRAETRSTKHDILEYLLKHGQVKAVQLAKSLQISPQAVRRHLKDLEEEG
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LIEHRAKQEGLGRPNYFYGLSRAGRDRFPNRYNDFAVSFLDTLAETAGEEQVKEVLRKQW
HHHHHHHHHCCCCCCHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
QKKAHSYRDRLGDGSLPERLARLVNLRKEEGYMAEVIPATDHGHDGFLLTEHHCAIADVA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEECCCHHHHHHH
ESFPVVCGNELEMFEEVLPDCTVTRTQWINEGEHQCGYIIQAKD
HCCCCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEEECC
>Mature Secondary Structure 
SNGLSMTLSDTRAETRSTKHDILEYLLKHGQVKAVQLAKSLQISPQAVRRHLKDLEEEG
CCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LIEHRAKQEGLGRPNYFYGLSRAGRDRFPNRYNDFAVSFLDTLAETAGEEQVKEVLRKQW
HHHHHHHHHCCCCCCHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
QKKAHSYRDRLGDGSLPERLARLVNLRKEEGYMAEVIPATDHGHDGFLLTEHHCAIADVA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEECCCHHHHHHH
ESFPVVCGNELEMFEEVLPDCTVTRTQWINEGEHQCGYIIQAKD
HCCCCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA