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The map label for this gene is speA [H]

Identifier: 170078414

GI number: 170078414

Start: 1895785

End: 1897719

Strand: Reverse

Name: speA [H]

Synonym: SYNPCC7002_A1808

Alternate gene names: 170078414

Gene position: 1897719-1895785 (Counterclockwise)

Preceding gene: 170078417

Following gene: 170078410

Centisome position: 63.09

GC content: 49.87

Gene sequence:

>1935_bases
ATGAACAAAGCCCTTGGTTGTTTGGAGCAGTCAGTAAATACCCGTTGGACAGTGGCGGATAGCGAGACGTTATACCAAGT
GGCAGGGTGGGGGGAACCATATTTTTCGATTAATAACCAGGGTCATGTGCAGGTGTCTCCCCTTGGGGACGCAGGGACAA
GCATTGATCTATTTGAGCTGGTAGAATCCCTCAAACAGCGAAACATTGGTTTACCCTTCTTAATTCGTTTTCCGGATATT
CTGCGCGATCGCATTGAACGGCTCCAGGACTGTTTTGCGACGGCGATCGCCCGGTATGACTATCCGAACCATTACCGGGG
TGTGTATCCGGTCAAATGCAATCAGCAGCGCCATTTGGTAGAAGATCTTGTGGAATTGGGGCGCACCCACCATCTGGGCC
TAGAAGCGGGTTCTAAGCCAGAACTCATGATTGCGATCGCCCTGTTGGAACCAGAGGCCGATCAAGAGCGACTGCTCATT
TGCAACGGTTATAAGGATCAGCATTACATTGAAACGGCCCTCCTAGCGACCCAATTGGGGCACCGCGCCTTGATCGTGAT
CGAGCAGCCGGAAGAATTAGACTTGGTGATTCGGGCGAGTCAAAGTTTGGGCATCCGGCCGATGTTGGGCATTCGCGCCA
AGCTTGCCAGTCGCGGCATTGGTCGTTGGGGGGGCTCCTCTGGCGATCGCGCTAAATTTGGGTTAACCATTCCGCAGATT
TTGCGGCTCGTGGAAAAACTACAGGCAGAGGAAATGCTCGATTGCCTGCAATTATTGCATTACCACATCGGTTCCCAACT
TTCCTCGATCAGTGTTGTTAAGTCTGCCATCCGAGAAGCCTCACAAATCTATGTGGAACTGGTAAAACTCGGCGCTCCCA
TGGGCTTTTTGGATGTGGGCGGCGGTCTCGCGGTGGATTACAGCGGCTCCAAGAACAATTTCCCCTCCTCGAAGAACTAC
AACATGCAAAACTACGCCAATGACGTGGTGGCGACGGTGCAGGATACTTGCGATGAAACTAACGTGCCCGTGCCCGTGCT
GGTAAGTGAAAGTGGGCGAGCGATCGCCTCCCACCAGGCCGTGTTAATTTTTGATGTCCTCGGCAGTAGTGAAGTAGACC
CAATTTTGCCCCCGAAGCCCGATTACAAAGAGCATTTAGTGCTGCGTAATCTACGGGAAACCTACGACACCATTACCCCA
GAAAATTACCAAGAAAATTATCATGATGCCGTGCAATTTAAAGACGAAGCGATCAGTTTGTTTAATTTGGGCTATCTCAG
TTTAGGCGATCGCGCCAATGCCGAAGAATTGTACTGGTCTTGTTGCCAGAAAATTTTCTCGATTATCCAAGGGCAAGCCA
GCATCCCCGAAGACTTTGAAGAACTGTGGCAAAATATGGCCGCCCTCTACTACGTGAATTTGTCTGTGTTTCAATCGGTG
CCAGACAGTTGGGCTATTGATCAGCTTTTTCCGATTATGCCGATCCACCGACTCCACGAAGAGCCGACAAAAAAAGGCAT
CCTGGCAGATTTAACCTGTGATAGTGACGGACGTATTAACCGTTTTATTGATACTAAGGCCGAAAGTAAAAATCTTCTTG
AACTGCATCCTCCCAATGGTCAGCCTTACTATCTGGGTCTCTTTTTAATGGGCGCTTACCAAGAAATTATGGGCAACCTC
CACAACCTGTTTGGCGATACCCATGTGGTGCACGTGCGTCTGACCGATGACGGCTACCACCTCGAACACCTCGTAGAAGG
GGACACGATCAAAGAAGTTTTGCAGTATGTGCAATATGACGTGGCCGATCTCCTCGAAACAATGCGGTGTCGCACAGAGA
AAGCCCTGAGTGAAAAACGCCTAACCCTCCAGCAGTCACAACTTTTGATTAACCATTATCGTCAAAGCTTAGAGAGCTAC
ACCTACCTCCACTAA

Upstream 100 bases:

>100_bases
TTGTGTATGATGAGGCGTCTCTGGGAAAATAAGAGAGTGGCAATTTTCAAAAATTGTCCAGGCCCGGCAAAAATTTAATG
GAATAGGTTGCAAACCCACG

Downstream 100 bases:

>100_bases
TCATCCGATCAGTGCAAATTCACAAGGAATCTGTATTTACTCCAAGCCCAAATATTGACTTATTTTTCTACAGGATAAGA
AAAGCAGCCGCCGTCTCTAT

Product: arginine decarboxylase

Products: NA

Alternate protein names: ADC [H]

Number of amino acids: Translated: 644; Mature: 644

Protein sequence:

>644_residues
MNKALGCLEQSVNTRWTVADSETLYQVAGWGEPYFSINNQGHVQVSPLGDAGTSIDLFELVESLKQRNIGLPFLIRFPDI
LRDRIERLQDCFATAIARYDYPNHYRGVYPVKCNQQRHLVEDLVELGRTHHLGLEAGSKPELMIAIALLEPEADQERLLI
CNGYKDQHYIETALLATQLGHRALIVIEQPEELDLVIRASQSLGIRPMLGIRAKLASRGIGRWGGSSGDRAKFGLTIPQI
LRLVEKLQAEEMLDCLQLLHYHIGSQLSSISVVKSAIREASQIYVELVKLGAPMGFLDVGGGLAVDYSGSKNNFPSSKNY
NMQNYANDVVATVQDTCDETNVPVPVLVSESGRAIASHQAVLIFDVLGSSEVDPILPPKPDYKEHLVLRNLRETYDTITP
ENYQENYHDAVQFKDEAISLFNLGYLSLGDRANAEELYWSCCQKIFSIIQGQASIPEDFEELWQNMAALYYVNLSVFQSV
PDSWAIDQLFPIMPIHRLHEEPTKKGILADLTCDSDGRINRFIDTKAESKNLLELHPPNGQPYYLGLFLMGAYQEIMGNL
HNLFGDTHVVHVRLTDDGYHLEHLVEGDTIKEVLQYVQYDVADLLETMRCRTEKALSEKRLTLQQSQLLINHYRQSLESY
TYLH

Sequences:

>Translated_644_residues
MNKALGCLEQSVNTRWTVADSETLYQVAGWGEPYFSINNQGHVQVSPLGDAGTSIDLFELVESLKQRNIGLPFLIRFPDI
LRDRIERLQDCFATAIARYDYPNHYRGVYPVKCNQQRHLVEDLVELGRTHHLGLEAGSKPELMIAIALLEPEADQERLLI
CNGYKDQHYIETALLATQLGHRALIVIEQPEELDLVIRASQSLGIRPMLGIRAKLASRGIGRWGGSSGDRAKFGLTIPQI
LRLVEKLQAEEMLDCLQLLHYHIGSQLSSISVVKSAIREASQIYVELVKLGAPMGFLDVGGGLAVDYSGSKNNFPSSKNY
NMQNYANDVVATVQDTCDETNVPVPVLVSESGRAIASHQAVLIFDVLGSSEVDPILPPKPDYKEHLVLRNLRETYDTITP
ENYQENYHDAVQFKDEAISLFNLGYLSLGDRANAEELYWSCCQKIFSIIQGQASIPEDFEELWQNMAALYYVNLSVFQSV
PDSWAIDQLFPIMPIHRLHEEPTKKGILADLTCDSDGRINRFIDTKAESKNLLELHPPNGQPYYLGLFLMGAYQEIMGNL
HNLFGDTHVVHVRLTDDGYHLEHLVEGDTIKEVLQYVQYDVADLLETMRCRTEKALSEKRLTLQQSQLLINHYRQSLESY
TYLH
>Mature_644_residues
MNKALGCLEQSVNTRWTVADSETLYQVAGWGEPYFSINNQGHVQVSPLGDAGTSIDLFELVESLKQRNIGLPFLIRFPDI
LRDRIERLQDCFATAIARYDYPNHYRGVYPVKCNQQRHLVEDLVELGRTHHLGLEAGSKPELMIAIALLEPEADQERLLI
CNGYKDQHYIETALLATQLGHRALIVIEQPEELDLVIRASQSLGIRPMLGIRAKLASRGIGRWGGSSGDRAKFGLTIPQI
LRLVEKLQAEEMLDCLQLLHYHIGSQLSSISVVKSAIREASQIYVELVKLGAPMGFLDVGGGLAVDYSGSKNNFPSSKNY
NMQNYANDVVATVQDTCDETNVPVPVLVSESGRAIASHQAVLIFDVLGSSEVDPILPPKPDYKEHLVLRNLRETYDTITP
ENYQENYHDAVQFKDEAISLFNLGYLSLGDRANAEELYWSCCQKIFSIIQGQASIPEDFEELWQNMAALYYVNLSVFQSV
PDSWAIDQLFPIMPIHRLHEEPTKKGILADLTCDSDGRINRFIDTKAESKNLLELHPPNGQPYYLGLFLMGAYQEIMGNL
HNLFGDTHVVHVRLTDDGYHLEHLVEGDTIKEVLQYVQYDVADLLETMRCRTEKALSEKRLTLQQSQLLINHYRQSLESY
TYLH

Specific function: Catalyzes the biosynthesis of agmatine from arginine [H]

COG id: COG1166

COG function: function code E; Arginine decarboxylase (spermidine biosynthesis)

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789307, Length=630, Percent_Identity=39.8412698412698, Blast_Score=456, Evalue=1e-129,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009006
- InterPro:   IPR002985
- InterPro:   IPR022643
- InterPro:   IPR022657
- InterPro:   IPR022644
- InterPro:   IPR022653
- InterPro:   IPR000183 [H]

Pfam domain/function: PF02784 Orn_Arg_deC_N; PF00278 Orn_DAP_Arg_deC [H]

EC number: =4.1.1.19 [H]

Molecular weight: Translated: 72720; Mature: 72720

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS00878 ODR_DC_2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKALGCLEQSVNTRWTVADSETLYQVAGWGEPYFSINNQGHVQVSPLGDAGTSIDLFEL
CCHHHHHHHHCCCCEEEEECCCHHHHHCCCCCCCEEECCCCCEEEEECCCCCCCCHHHHH
VESLKQRNIGLPFLIRFPDILRDRIERLQDCFATAIARYDYPNHYRGVYPVKCNQQRHLV
HHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHH
EDLVELGRTHHLGLEAGSKPELMIAIALLEPEADQERLLICNGYKDQHYIETALLATQLG
HHHHHHCCCEECCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHCC
HRALIVIEQPEELDLVIRASQSLGIRPMLGIRAKLASRGIGRWGGSSGDRAKFGLTIPQI
CEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCHHHH
LRLVEKLQAEEMLDCLQLLHYHIGSQLSSISVVKSAIREASQIYVELVKLGAPMGFLDVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC
GGLAVDYSGSKNNFPSSKNYNMQNYANDVVATVQDTCDETNVPVPVLVSESGRAIASHQA
CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEECCCCE
VLIFDVLGSSEVDPILPPKPDYKEHLVLRNLRETYDTITPENYQENYHDAVQFKDEAISL
EEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
FNLGYLSLGDRANAEELYWSCCQKIFSIIQGQASIPEDFEELWQNMAALYYVNLSVFQSV
HCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDSWAIDQLFPIMPIHRLHEEPTKKGILADLTCDSDGRINRFIDTKAESKNLLELHPPNG
CCCCCHHHHHHHCCHHHHHCCHHHCCCEEEEEECCCCCEEHHCCCCCCCCCEEEEECCCC
QPYYLGLFLMGAYQEIMGNLHNLFGDTHVVHVRLTDDGYHLEHLVEGDTIKEVLQYVQYD
CCEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHH
VADLLETMRCRTEKALSEKRLTLQQSQLLINHYRQSLESYTYLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNKALGCLEQSVNTRWTVADSETLYQVAGWGEPYFSINNQGHVQVSPLGDAGTSIDLFEL
CCHHHHHHHHCCCCEEEEECCCHHHHHCCCCCCCEEECCCCCEEEEECCCCCCCCHHHHH
VESLKQRNIGLPFLIRFPDILRDRIERLQDCFATAIARYDYPNHYRGVYPVKCNQQRHLV
HHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHH
EDLVELGRTHHLGLEAGSKPELMIAIALLEPEADQERLLICNGYKDQHYIETALLATQLG
HHHHHHCCCEECCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHCC
HRALIVIEQPEELDLVIRASQSLGIRPMLGIRAKLASRGIGRWGGSSGDRAKFGLTIPQI
CEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCHHHH
LRLVEKLQAEEMLDCLQLLHYHIGSQLSSISVVKSAIREASQIYVELVKLGAPMGFLDVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC
GGLAVDYSGSKNNFPSSKNYNMQNYANDVVATVQDTCDETNVPVPVLVSESGRAIASHQA
CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEECCCCE
VLIFDVLGSSEVDPILPPKPDYKEHLVLRNLRETYDTITPENYQENYHDAVQFKDEAISL
EEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
FNLGYLSLGDRANAEELYWSCCQKIFSIIQGQASIPEDFEELWQNMAALYYVNLSVFQSV
HCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDSWAIDQLFPIMPIHRLHEEPTKKGILADLTCDSDGRINRFIDTKAESKNLLELHPPNG
CCCCCHHHHHHHCCHHHHHCCHHHCCCEEEEEECCCCCEEHHCCCCCCCCCEEEEECCCC
QPYYLGLFLMGAYQEIMGNLHNLFGDTHVVHVRLTDDGYHLEHLVEGDTIKEVLQYVQYD
CCEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHH
VADLLETMRCRTEKALSEKRLTLQQSQLLINHYRQSLESYTYLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12240834 [H]