| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078413
Identifier: 170078413
GI number: 170078413
Start: 1894540
End: 1895688
Strand: Direct
Name: 170078413
Synonym: SYNPCC7002_A1807
Alternate gene names: NA
Gene position: 1894540-1895688 (Clockwise)
Preceding gene: 170078412
Following gene: 170078415
Centisome position: 62.98
GC content: 49.61
Gene sequence:
>1149_bases GTGGATATGAATATGGTCACTGCTGTTTTAGAGCCTTCGCGGCACCCCCTTGCCCCTTTCATTCATCGCCTTGAGCAAGG TTTACCGATGCTGGAAAATAGCGATCAAAATGTGATGGAAGTGGTGGGCATCCTCAAGAGTTATGGGGTGGTCTTAGATG CCTACTCGAATAATCTGAACTATGTGGCCGAATCGCAATTTCTCAATGTTTTTCCCTTTTTTAAGTATTTCAACGGCCAA TTAACGGGCGATCGCCTCCTGAAACATTGGTGGCATGACCGGATTAACTTTGAATATGCCGAATATTGCATGAAGTCGAT GTTTTGGCATGGTGGTGGGGGTTTAGATGCCTACCTCGACACGCCAGAATTTATTGAGGCCGCCAAAAAGGCGATCGCCG CCCGCTGGAAAAATAATCCCTTCATGTTGGGTTTGAATAAACTCTTCCCCGATTTTCTCCTGGAGCAAACCCGACAAATG GCCTACTACACAGGCTTAGGTCAGTTCTGGCGCGTCATGAGTGATATGTTTCTCGACCTGAGCGATCGCTATGATGCCGG TGAAATCAAAACCACCGCCGACGTGACCAACCACGTCCTAGCCGGATTGGTAGCTGATGCCAGCCGTCCCATCACCTACA AGGTCGAAATCAAAGGGGAAGTGTATGAGTTGATCCCAGAATCTGCGGGTTTAACCTTCCTCATGGATACCGCCGTTCCC TACGTCGAAGCGATTTTCTTCCGGGGAACTCCCTTTGCTGGCACCATCTCCTACAATGCCCAGGCCGCCCAAGTCCCCGC CGAACAAGGGATCTTTACCTATGGGGCCCTCTATGCCGACCCATTACCCATTGGTGGTTCGGGGATTCCGCCGACTCTGT TGATGCAAGATATGCGCCACTTTTTGCCAGACTATCTCTGGGATTACTATATGGGCACCCTGCGCAAAGAGCAGGATTTG CGGGTCAAAATTTGCCAAACCTTCCAAAAATCAATGTTCTGTGTGACCAGTGCGGCTTTGATGGGGCTGGCTCCCCACGG GTTAGAACCCAAAACCCTCGCTGAGCAACAGGCAAACCGTGAATTTTTTGAACATTGGATGGATCGCCTCTTAAGTTCTC AAATTAAAGCTGTTAATAGCCAAGCATAG
Upstream 100 bases:
>100_bases CAGTGGCTGGTGCGCTGGAGTGAGATCGACACAGCGGCCTTGGTGGCATCCCCGACGGCTATTGAAATTTCTTTAAAGTA AAAGTAAGCGTTTAAGAATT
Downstream 100 bases:
>100_bases AGACGGCGGCTGCTTTTCTTATCCTGTAGAAAAATAAGTCAATATTTGGGCTTGGAGTAAATACAGATTCCTTGTGAATT TGCACTGATCGGATGATTAG
Product: CO2 hydration protein
Products: NA
Alternate protein names: CO2 Hydration Protein ChpX; CO2-Hydration Protein; Carbon Dioxide Hydration Protein; CO2 Hydration; High Affinity CO2 Uptake Protein; Low Affinity CO2 Uptake Protein; Uptake
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MDMNMVTAVLEPSRHPLAPFIHRLEQGLPMLENSDQNVMEVVGILKSYGVVLDAYSNNLNYVAESQFLNVFPFFKYFNGQ LTGDRLLKHWWHDRINFEYAEYCMKSMFWHGGGGLDAYLDTPEFIEAAKKAIAARWKNNPFMLGLNKLFPDFLLEQTRQM AYYTGLGQFWRVMSDMFLDLSDRYDAGEIKTTADVTNHVLAGLVADASRPITYKVEIKGEVYELIPESAGLTFLMDTAVP YVEAIFFRGTPFAGTISYNAQAAQVPAEQGIFTYGALYADPLPIGGSGIPPTLLMQDMRHFLPDYLWDYYMGTLRKEQDL RVKICQTFQKSMFCVTSAALMGLAPHGLEPKTLAEQQANREFFEHWMDRLLSSQIKAVNSQA
Sequences:
>Translated_382_residues MDMNMVTAVLEPSRHPLAPFIHRLEQGLPMLENSDQNVMEVVGILKSYGVVLDAYSNNLNYVAESQFLNVFPFFKYFNGQ LTGDRLLKHWWHDRINFEYAEYCMKSMFWHGGGGLDAYLDTPEFIEAAKKAIAARWKNNPFMLGLNKLFPDFLLEQTRQM AYYTGLGQFWRVMSDMFLDLSDRYDAGEIKTTADVTNHVLAGLVADASRPITYKVEIKGEVYELIPESAGLTFLMDTAVP YVEAIFFRGTPFAGTISYNAQAAQVPAEQGIFTYGALYADPLPIGGSGIPPTLLMQDMRHFLPDYLWDYYMGTLRKEQDL RVKICQTFQKSMFCVTSAALMGLAPHGLEPKTLAEQQANREFFEHWMDRLLSSQIKAVNSQA >Mature_382_residues MDMNMVTAVLEPSRHPLAPFIHRLEQGLPMLENSDQNVMEVVGILKSYGVVLDAYSNNLNYVAESQFLNVFPFFKYFNGQ LTGDRLLKHWWHDRINFEYAEYCMKSMFWHGGGGLDAYLDTPEFIEAAKKAIAARWKNNPFMLGLNKLFPDFLLEQTRQM AYYTGLGQFWRVMSDMFLDLSDRYDAGEIKTTADVTNHVLAGLVADASRPITYKVEIKGEVYELIPESAGLTFLMDTAVP YVEAIFFRGTPFAGTISYNAQAAQVPAEQGIFTYGALYADPLPIGGSGIPPTLLMQDMRHFLPDYLWDYYMGTLRKEQDL RVKICQTFQKSMFCVTSAALMGLAPHGLEPKTLAEQQANREFFEHWMDRLLSSQIKAVNSQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43418; Mature: 43418
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMNMVTAVLEPSRHPLAPFIHRLEQGLPMLENSDQNVMEVVGILKSYGVVLDAYSNNLN CCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCC YVAESQFLNVFPFFKYFNGQLTGDRLLKHWWHDRINFEYAEYCMKSMFWHGGGGLDAYLD EEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCC TPEFIEAAKKAIAARWKNNPFMLGLNKLFPDFLLEQTRQMAYYTGLGQFWRVMSDMFLDL CHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SDRYDAGEIKTTADVTNHVLAGLVADASRPITYKVEIKGEVYELIPESAGLTFLMDTAVP CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHCCCCCCCEEEHHHHHH YVEAIFFRGTPFAGTISYNAQAAQVPAEQGIFTYGALYADPLPIGGSGIPPTLLMQDMRH HHHHHHHCCCCCEEEEECCCHHHHCCHHCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHH FLPDYLWDYYMGTLRKEQDLRVKICQTFQKSMFCVTSAALMGLAPHGLEPKTLAEQQANR HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH EFFEHWMDRLLSSQIKAVNSQA HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDMNMVTAVLEPSRHPLAPFIHRLEQGLPMLENSDQNVMEVVGILKSYGVVLDAYSNNLN CCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCC YVAESQFLNVFPFFKYFNGQLTGDRLLKHWWHDRINFEYAEYCMKSMFWHGGGGLDAYLD EEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCC TPEFIEAAKKAIAARWKNNPFMLGLNKLFPDFLLEQTRQMAYYTGLGQFWRVMSDMFLDL CHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SDRYDAGEIKTTADVTNHVLAGLVADASRPITYKVEIKGEVYELIPESAGLTFLMDTAVP CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHCCCCCCCEEEHHHHHH YVEAIFFRGTPFAGTISYNAQAAQVPAEQGIFTYGALYADPLPIGGSGIPPTLLMQDMRH HHHHHHHCCCCCEEEEECCCHHHHCCHHCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHH FLPDYLWDYYMGTLRKEQDLRVKICQTFQKSMFCVTSAALMGLAPHGLEPKTLAEQQANR HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH EFFEHWMDRLLSSQIKAVNSQA HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA