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The map label for this gene is ccmK

Identifier: 170078408

GI number: 170078408

Start: 1887902

End: 1888240

Strand: Reverse

Name: ccmK

Synonym: SYNPCC7002_A1802

Alternate gene names: 170078408

Gene position: 1888240-1887902 (Counterclockwise)

Preceding gene: 170078409

Following gene: 170078407

Centisome position: 62.77

GC content: 52.51

Gene sequence:

>339_bases
ATGTCTATTGCAGTCGGAATGGTAGAAACCCTCGGTTTCCCCGCAGTTGTAGAAGCTGCTGACGCGATGGTAAAAGCCGC
CCGTGTAACCCTCGTTGGTTACGAAAAAATCGGTAGTGGCCGCGTTACCGTAATTGTCCGTGGTGATGTTTCTGAAGTCC
AAGCTTCCGTTTCTGCCGGTACTGATAATGTCAGCCGCGTCAACGGTGGCCAAGTGCTTTCTACCCACATCATCGCCCGT
CCCCACGAGAACCTCGAATACGTTCTGCCGATCCGGTACACCGAAGCCGTAGAACAGTTTCGTGAAAGCGTGAATCCCCA
ACCTCTGAGAAGAGTGTAA

Upstream 100 bases:

>100_bases
TTAACCCTGGGACAGAGGGGCGATCGCCATTCTTTTTTCGGTCACGCATCCTCTGTGATTTCCAGAAACTATTAATTAAA
AGCAAGAGGAGAAAAACTCA

Downstream 100 bases:

>100_bases
TTTTTTAATAAAAAAATTTTTAGTTATAAATTTTCATGCAAATTGCCAAAGTACGTGGCACTGTCGTCAGCACCTACAAA
GCAGAAAGCCTCCGGGGGAT

Product: carbon dioxide concentrating mechanism protein

Products: NA

Alternate protein names: Carboxysome shell protein CsoS1

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MSIAVGMVETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVSAGTDNVSRVNGGQVLSTHIIAR
PHENLEYVLPIRYTEAVEQFRESVNPQPLRRV

Sequences:

>Translated_112_residues
MSIAVGMVETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVSAGTDNVSRVNGGQVLSTHIIAR
PHENLEYVLPIRYTEAVEQFRESVNPQPLRRV
>Mature_111_residues
SIAVGMVETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVSAGTDNVSRVNGGQVLSTHIIARP
HENLEYVLPIRYTEAVEQFRESVNPQPLRRV

Specific function: May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family

Homologues:

Organism=Escherichia coli, GI87082108, Length=88, Percent_Identity=52.2727272727273, Blast_Score=85, Evalue=9e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CCMK_SYNP2 (O30709)

Other databases:

- EMBL:   AF015889
- EMBL:   CP000951
- RefSeq:   YP_001735046.1
- ProteinModelPortal:   O30709
- SMR:   O30709
- GeneID:   6056529
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A1802
- HOGENOM:   HBG637012
- OMA:   HIDTEKI
- ProtClustDB:   CLSK892529
- InterPro:   IPR020808
- InterPro:   IPR000249
- SMART:   SM00877

Pfam domain/function: PF00936 BMC

EC number: NA

Molecular weight: Translated: 12033; Mature: 11902

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS01139 BACT_MICROCOMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIAVGMVETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVSAG
CCEECCHHHHCCCCHHHHHHHHHHHHHHEEEEEHEECCCCEEEEEEECCHHHHHHHHHCC
TDNVSRVNGGQVLSTHIIARPHENLEYVLPIRYTEAVEQFRESVNPQPLRRV
CCCCCCCCCCEEEEEEEEECCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SIAVGMVETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVSAG
CEECCHHHHCCCCHHHHHHHHHHHHHHEEEEEHEECCCCEEEEEEECCHHHHHHHHHCC
TDNVSRVNGGQVLSTHIIARPHENLEYVLPIRYTEAVEQFRESVNPQPLRRV
CCCCCCCCCCEEEEEEEEECCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA