| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is prpC [H]
Identifier: 170078394
GI number: 170078394
Start: 1873571
End: 1875781
Strand: Direct
Name: prpC [H]
Synonym: SYNPCC7002_A1788
Alternate gene names: 170078394
Gene position: 1873571-1875781 (Clockwise)
Preceding gene: 170078390
Following gene: 170078395
Centisome position: 62.29
GC content: 55.18
Gene sequence:
>2211_bases ATGGATATTTCTAAGGTAACGATTTCTTGCGGGAAAAACGACTGCCCAGGGGTAGCTTCGTTGGCCCAATCCCATTGTCC CCTCTGCCAAGCGCCGGTGGTCAAGCGCTATCTGCGGGTTGTGGGGGCCCCTCAGTTGACCCTGACGCCCCAAACTCTCG TCGGAGAAGGCGATCGCTATTGGGTGACAGAAACCCCAGATATTCTCTTAGACACAAAGCCCGCATTGCCCCCGGTACTG ACTGAAACGCTCCCCCCGGCCATCGAAAGTTATCTACGGCTCTCGACCCATCTGCTCCACATTCCCAAGGTATTTGGCCT GTTGACGCCCCAGGAAGGGTGGTTACTGGAATATCCATCGGTGGCCCTCGACGAAACCGGCTATCCCCGCTGGCCAAATT TATTTATGCCCCTCACGGAGGCTTGGCAGACCGCAACCCCGCTGCAACAACTCAACTGGCTGATGCAGATTGCGGCGCTG TTACCAGATTTTGTGGAACATGGAGTGGTTCCGAGTGTTTACTATCTGGGGGACTGGGCTGTCCACGGGGGCCTTATTCA GGTGCAAAAACTGCGCTTTGAACCCAAACAGCCCTTAAATTTGGTGCGCCTGGGGAATTTGTGGGCCGAGTTACTCGAAA CCGTGGCCCCTGTGATTCAACCTTTTTGTCATCGCCTCCAGCAGGGGTTAAGCCAAGGCCAGATCCAAGATCCGCAGCAG CTCTATGGGATTTTGCGCCAGGGGGTTTTGGAATTGGGGCGATCGCCCCTGGAATATCATTACCGCCTCTATACCAAAAC TGACGCTGGCCCCAGCCGTGACCACAATGAGGATGCCTGTTTTCCGCCCCCCGGCAAAGTTTATCCCGATGCGCCCCTAG CGATTGTCTGTGATGGCATTGGCGGCCATGAACAGGGGGAAGTGGCCTCGGCGATCGCCATTGAGCAACTGCAAACCCAA CTGGAAAATTTCACGGATCACCCACCGGAGCAGGCCGCCCAGATCCAAGAAAAATTAGCCGCCGCCGTGCTCCAGGCCAA CGATGTAATTTGCGATCGCAACGACCAAGAAAATCGCCAAGACCGGAACCGCATGGGCACCACCGTTGTCATGGCCTGGG TTCATGCCCCCGAACTTTACTTGACCCACGTGGGGGATTCCCGCATTTATCGCATCACCACCACCAGTTGCCACCAACTG ACCTATGACGATGACCTCGGTTCCCGGGAAGTCCGCCTTGGCTATGCCCTCTACAAAGACGCCCTGGCCTACCCTGGATC TGGGGCTTTGGTGCAAGCTTTGGGGATGAATCCGTCCCATTCCCTCCACCCCACCGTAACGTCCCTGGTGCTGGATCAAG ACGCGATTTACCTCCTTTGTTCTGACGGCCTCAGTGATGATGGCCAAGTAGAAGCCCATTGGGCAGCGGAAATCGCGCCC CTAATCCAAGGCCAAAAAGATCTGGCCCAAGTGGGCGATCGCCTGATTGAAATTGCCAATACCAAGAATGGCCACGACAA CAGCACCATTGCCCTGCTCCAGGTCAAGGTGCAGGGAGAAGTTCCCGAAACGCCGATTCCTTACCCGAAACTCACCCAAC TACAACCGACCTTTATCCAACCCAAGGCGCCGCCCCCCGTGGCAACCCAAATGTCTCGGCTCCGGGGACGTAAAACGGCA AATTCCCCCAGTCGTCTATTGCTGATTTTGGTTGGGTGTCTGTGTTTGTTGGGGGTTGGTAGTTTGCTGTGGCAACGTTG GCAGCGGGAACCCCTAGGCAGTTCTCCCTCCACAACACCACCAACGATTAATCCTGTCCCCATTACGGATGTCACCGAAG ATCCACCAACAGTAACGGTGCCCGCAGGGGAACCAGAGGAGACGACTTTACCCCTGAGCAAAAACCAAATTTTTCAGCTC CAGGAAAATCGTTCTCTCACAGCCTACGCCACACCAGAGGCGATCGCCACCACCACCGCCGATCCGTTATTAATTTTGGG GGGCAGTATTCTTCGGGTCGAACAAATCAACGGGGAAAATCAAGTGATGCTTAAACTTTGTCAAAAAGGCGATCAAAGCG CGCCTCCAAGTCGCAAACTTTTGACCGAGGGCAATAATGCTTGGGTGGCCCTTGCTGACCTAGAGGGACAATTAACCCCT GATTTTACGGTGCCTGCCGCGAATCCTTGTGTGCCATCTGCTCTGGAATAA
Upstream 100 bases:
>100_bases GCTAGGGGAAAGAATCATAGAAAATGCAGCGCAAAGAATACGTTAAATTAGTGATCATGCGGGGAAACCCCCAGTCAATC TGCCCCTCAGGCACAGATGT
Downstream 100 bases:
>100_bases AAATGTTGGGGCTATCGATTTTCCGGAGGCATTGCATAATGGAGGGAGATTTAAGCTCAGTGTGGCCCTGCCATTCGACA GATCTATCGCTATCAGCAGT
Product: protein phosphatase 2C domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 736; Mature: 736
Protein sequence:
>736_residues MDISKVTISCGKNDCPGVASLAQSHCPLCQAPVVKRYLRVVGAPQLTLTPQTLVGEGDRYWVTETPDILLDTKPALPPVL TETLPPAIESYLRLSTHLLHIPKVFGLLTPQEGWLLEYPSVALDETGYPRWPNLFMPLTEAWQTATPLQQLNWLMQIAAL LPDFVEHGVVPSVYYLGDWAVHGGLIQVQKLRFEPKQPLNLVRLGNLWAELLETVAPVIQPFCHRLQQGLSQGQIQDPQQ LYGILRQGVLELGRSPLEYHYRLYTKTDAGPSRDHNEDACFPPPGKVYPDAPLAIVCDGIGGHEQGEVASAIAIEQLQTQ LENFTDHPPEQAAQIQEKLAAAVLQANDVICDRNDQENRQDRNRMGTTVVMAWVHAPELYLTHVGDSRIYRITTTSCHQL TYDDDLGSREVRLGYALYKDALAYPGSGALVQALGMNPSHSLHPTVTSLVLDQDAIYLLCSDGLSDDGQVEAHWAAEIAP LIQGQKDLAQVGDRLIEIANTKNGHDNSTIALLQVKVQGEVPETPIPYPKLTQLQPTFIQPKAPPPVATQMSRLRGRKTA NSPSRLLLILVGCLCLLGVGSLLWQRWQREPLGSSPSTTPPTINPVPITDVTEDPPTVTVPAGEPEETTLPLSKNQIFQL QENRSLTAYATPEAIATTTADPLLILGGSILRVEQINGENQVMLKLCQKGDQSAPPSRKLLTEGNNAWVALADLEGQLTP DFTVPAANPCVPSALE
Sequences:
>Translated_736_residues MDISKVTISCGKNDCPGVASLAQSHCPLCQAPVVKRYLRVVGAPQLTLTPQTLVGEGDRYWVTETPDILLDTKPALPPVL TETLPPAIESYLRLSTHLLHIPKVFGLLTPQEGWLLEYPSVALDETGYPRWPNLFMPLTEAWQTATPLQQLNWLMQIAAL LPDFVEHGVVPSVYYLGDWAVHGGLIQVQKLRFEPKQPLNLVRLGNLWAELLETVAPVIQPFCHRLQQGLSQGQIQDPQQ LYGILRQGVLELGRSPLEYHYRLYTKTDAGPSRDHNEDACFPPPGKVYPDAPLAIVCDGIGGHEQGEVASAIAIEQLQTQ LENFTDHPPEQAAQIQEKLAAAVLQANDVICDRNDQENRQDRNRMGTTVVMAWVHAPELYLTHVGDSRIYRITTTSCHQL TYDDDLGSREVRLGYALYKDALAYPGSGALVQALGMNPSHSLHPTVTSLVLDQDAIYLLCSDGLSDDGQVEAHWAAEIAP LIQGQKDLAQVGDRLIEIANTKNGHDNSTIALLQVKVQGEVPETPIPYPKLTQLQPTFIQPKAPPPVATQMSRLRGRKTA NSPSRLLLILVGCLCLLGVGSLLWQRWQREPLGSSPSTTPPTINPVPITDVTEDPPTVTVPAGEPEETTLPLSKNQIFQL QENRSLTAYATPEAIATTTADPLLILGGSILRVEQINGENQVMLKLCQKGDQSAPPSRKLLTEGNNAWVALADLEGQLTP DFTVPAANPCVPSALE >Mature_736_residues MDISKVTISCGKNDCPGVASLAQSHCPLCQAPVVKRYLRVVGAPQLTLTPQTLVGEGDRYWVTETPDILLDTKPALPPVL TETLPPAIESYLRLSTHLLHIPKVFGLLTPQEGWLLEYPSVALDETGYPRWPNLFMPLTEAWQTATPLQQLNWLMQIAAL LPDFVEHGVVPSVYYLGDWAVHGGLIQVQKLRFEPKQPLNLVRLGNLWAELLETVAPVIQPFCHRLQQGLSQGQIQDPQQ LYGILRQGVLELGRSPLEYHYRLYTKTDAGPSRDHNEDACFPPPGKVYPDAPLAIVCDGIGGHEQGEVASAIAIEQLQTQ LENFTDHPPEQAAQIQEKLAAAVLQANDVICDRNDQENRQDRNRMGTTVVMAWVHAPELYLTHVGDSRIYRITTTSCHQL TYDDDLGSREVRLGYALYKDALAYPGSGALVQALGMNPSHSLHPTVTSLVLDQDAIYLLCSDGLSDDGQVEAHWAAEIAP LIQGQKDLAQVGDRLIEIANTKNGHDNSTIALLQVKVQGEVPETPIPYPKLTQLQPTFIQPKAPPPVATQMSRLRGRKTA NSPSRLLLILVGCLCLLGVGSLLWQRWQREPLGSSPSTTPPTINPVPITDVTEDPPTVTVPAGEPEETTLPLSKNQIFQL QENRSLTAYATPEAIATTTADPLLILGGSILRVEQINGENQVMLKLCQKGDQSAPPSRKLLTEGNNAWVALADLEGQLTP DFTVPAANPCVPSALE
Specific function: Protein phosphatase that dephosphorylates prkC and fusA (elongation factor G). PrpC and prkC are cotranscribed, which suggests that they form a functional couple in vivo, prpC's primary role being possibly to counter the action of prkC. May be involved in
COG id: COG0631
COG function: function code T; Serine/threonine protein phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015655 - InterPro: IPR001932 - InterPro: IPR014045 [H]
Pfam domain/function: PF00481 PP2C [H]
EC number: =3.1.3.16 [H]
Molecular weight: Translated: 80600; Mature: 80600
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDISKVTISCGKNDCPGVASLAQSHCPLCQAPVVKRYLRVVGAPQLTLTPQTLVGEGDRY CCCCEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEECCHHHHCCCCEE WVTETPDILLDTKPALPPVLTETLPPAIESYLRLSTHLLHIPKVFGLLTPQEGWLLEYPS EEECCCCEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCC VALDETGYPRWPNLFMPLTEAWQTATPLQQLNWLMQIAALLPDFVEHGVVPSVYYLGDWA CEECCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHH VHGGLIQVQKLRFEPKQPLNLVRLGNLWAELLETVAPVIQPFCHRLQQGLSQGQIQDPQQ HCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LYGILRQGVLELGRSPLEYHYRLYTKTDAGPSRDHNEDACFPPPGKVYPDAPLAIVCDGI HHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC GGHEQGEVASAIAIEQLQTQLENFTDHPPEQAAQIQEKLAAAVLQANDVICDRNDQENRQ CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHH DRNRMGTTVVMAWVHAPELYLTHVGDSRIYRITTTSCHQLTYDDDLGSREVRLGYALYKD HHHHCCCEEEEEECCCCEEEEEECCCCEEEEEEECCCEEEEECCCCCCCEEEHHHHHHHH ALAYPGSGALVQALGMNPSHSLHPTVTSLVLDQDAIYLLCSDGLSDDGQVEAHWAAEIAP HHCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCEEEHHHHHHHH LIQGQKDLAQVGDRLIEIANTKNGHDNSTIALLQVKVQGEVPETPIPYPKLTQLQPTFIQ HHCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEC PKAPPPVATQMSRLRGRKTANSPSRLLLILVGCLCLLGVGSLLWQRWQREPLGSSPSTTP CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PTINPVPITDVTEDPPTVTVPAGEPEETTLPLSKNQIFQLQENRSLTAYATPEAIATTTA CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCHHHHCCC DPLLILGGSILRVEQINGENQVMLKLCQKGDQSAPPSRKLLTEGNNAWVALADLEGQLTP CCEEEECCCEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCC DFTVPAANPCVPSALE CEECCCCCCCCCCCCC >Mature Secondary Structure MDISKVTISCGKNDCPGVASLAQSHCPLCQAPVVKRYLRVVGAPQLTLTPQTLVGEGDRY CCCCEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEECCHHHHCCCCEE WVTETPDILLDTKPALPPVLTETLPPAIESYLRLSTHLLHIPKVFGLLTPQEGWLLEYPS EEECCCCEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCC VALDETGYPRWPNLFMPLTEAWQTATPLQQLNWLMQIAALLPDFVEHGVVPSVYYLGDWA CEECCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHH VHGGLIQVQKLRFEPKQPLNLVRLGNLWAELLETVAPVIQPFCHRLQQGLSQGQIQDPQQ HCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LYGILRQGVLELGRSPLEYHYRLYTKTDAGPSRDHNEDACFPPPGKVYPDAPLAIVCDGI HHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC GGHEQGEVASAIAIEQLQTQLENFTDHPPEQAAQIQEKLAAAVLQANDVICDRNDQENRQ CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHH DRNRMGTTVVMAWVHAPELYLTHVGDSRIYRITTTSCHQLTYDDDLGSREVRLGYALYKD HHHHCCCEEEEEECCCCEEEEEECCCCEEEEEEECCCEEEEECCCCCCCEEEHHHHHHHH ALAYPGSGALVQALGMNPSHSLHPTVTSLVLDQDAIYLLCSDGLSDDGQVEAHWAAEIAP HHCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCEEEHHHHHHHH LIQGQKDLAQVGDRLIEIANTKNGHDNSTIALLQVKVQGEVPETPIPYPKLTQLQPTFIQ HHCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEC PKAPPPVATQMSRLRGRKTANSPSRLLLILVGCLCLLGVGSLLWQRWQREPLGSSPSTTP CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PTINPVPITDVTEDPPTVTVPAGEPEETTLPLSKNQIFQLQENRSLTAYATPEAIATTTA CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCHHHHCCC DPLLILGGSILRVEQINGENQVMLKLCQKGDQSAPPSRKLLTEGNNAWVALADLEGQLTP CCEEEECCCEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCC DFTVPAANPCVPSALE CEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9534248; 9384377 [H]