| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078392
Identifier: 170078392
GI number: 170078392
Start: 1872093
End: 1872671
Strand: Reverse
Name: 170078392
Synonym: SYNPCC7002_A1786
Alternate gene names: NA
Gene position: 1872671-1872093 (Counterclockwise)
Preceding gene: 170078393
Following gene: 170078391
Centisome position: 62.26
GC content: 49.91
Gene sequence:
>579_bases ATGAATCAGCCATTTGTGCCCTCACCAGGAAAGGGTAATCGCCGTGCTTACCAAAATATTATGGAAAACCTGGTGCACAA GGAAATCCATCGGCAACTCAAGCGCCTCCCACAGAAATTAGCTGAATATATTGATGTGGTGGAGGTGGCCACCTATGCTT TGAACCGGGTGCCTCCCCTCTATGCCTCCAGCGAACGGGGTAAAGAGCGCCAAGAAGAAAAAGGCGTTCTGGATCTCAAG CAACAAATTAATATTGCGGTGCGCCAGGCGATCGCCGCTGTCCAACGGGATCCTTTGCGTTCTTCAACGCCCCTAGTGCC AGCCCAATATGCCCAATACGAAATCGCCGAAACCTGCCTACGGGATCTCGAAAAACTCCTACGGGATTCCTACCTCATCG AATCAGATGCCCCAGATATGGATTGGGATACCCTGAAAATCATTGTGGCCAAAGCCCTCAAAAAAGCAGCCACCCAGGGG ATTGTGCATCGCCGCATTGAAGATGTGATCACAGAATGGGAATATCAAACCTACGTTCCCCCTGTCTTTGATTGGCAAGA TCCCCATTACAAGTTTTAG
Upstream 100 bases:
>100_bases AAGTGGGTACCTTAAAGAAAAAGTGTTTTTCGCCCTTGTTTTCGCCAAAACCTGCAGTCTTTGCTAAAAAATTCCCCGTT GCTCTACAGGGGCTATTGTT
Downstream 100 bases:
>100_bases GGGTGATCGCCAGCTTAATTTTTCCACCGATGACCGCGACCACACAGCCTTTTGTTTATCGTTATCCTGGATTGATCCCT GGCATCCTGCGGAAACGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MNQPFVPSPGKGNRRAYQNIMENLVHKEIHRQLKRLPQKLAEYIDVVEVATYALNRVPPLYASSERGKERQEEKGVLDLK QQINIAVRQAIAAVQRDPLRSSTPLVPAQYAQYEIAETCLRDLEKLLRDSYLIESDAPDMDWDTLKIIVAKALKKAATQG IVHRRIEDVITEWEYQTYVPPVFDWQDPHYKF
Sequences:
>Translated_192_residues MNQPFVPSPGKGNRRAYQNIMENLVHKEIHRQLKRLPQKLAEYIDVVEVATYALNRVPPLYASSERGKERQEEKGVLDLK QQINIAVRQAIAAVQRDPLRSSTPLVPAQYAQYEIAETCLRDLEKLLRDSYLIESDAPDMDWDTLKIIVAKALKKAATQG IVHRRIEDVITEWEYQTYVPPVFDWQDPHYKF >Mature_192_residues MNQPFVPSPGKGNRRAYQNIMENLVHKEIHRQLKRLPQKLAEYIDVVEVATYALNRVPPLYASSERGKERQEEKGVLDLK QQINIAVRQAIAAVQRDPLRSSTPLVPAQYAQYEIAETCLRDLEKLLRDSYLIESDAPDMDWDTLKIIVAKALKKAATQG IVHRRIEDVITEWEYQTYVPPVFDWQDPHYKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22300; Mature: 22300
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQPFVPSPGKGNRRAYQNIMENLVHKEIHRQLKRLPQKLAEYIDVVEVATYALNRVPPL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC YASSERGKERQEEKGVLDLKQQINIAVRQAIAAVQRDPLRSSTPLVPAQYAQYEIAETCL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH RDLEKLLRDSYLIESDAPDMDWDTLKIIVAKALKKAATQGIVHRRIEDVITEWEYQTYVP HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PVFDWQDPHYKF CCCCCCCCCCCC >Mature Secondary Structure MNQPFVPSPGKGNRRAYQNIMENLVHKEIHRQLKRLPQKLAEYIDVVEVATYALNRVPPL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC YASSERGKERQEEKGVLDLKQQINIAVRQAIAAVQRDPLRSSTPLVPAQYAQYEIAETCL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH RDLEKLLRDSYLIESDAPDMDWDTLKIIVAKALKKAATQGIVHRRIEDVITEWEYQTYVP HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PVFDWQDPHYKF CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA