Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078393

Identifier: 170078393

GI number: 170078393

Start: 1872850

End: 1873488

Strand: Reverse

Name: 170078393

Synonym: SYNPCC7002_A1787

Alternate gene names: NA

Gene position: 1873488-1872850 (Counterclockwise)

Preceding gene: 170078399

Following gene: 170078392

Centisome position: 62.28

GC content: 50.7

Gene sequence:

>639_bases
ATGATTCTTTCCCCTAGCCAACGGCAGAAGCTCGATTCTAGCGATGATCAGCTTTTCTACGATTACCCCCGGTTTGTGAC
CCACGTAGATGATGGCTTTATTGACCAGTTAACCCAACTCTATGGCACGTTGTTGCAGCCCAATGATCGAGTTCTAGATT
TGATGAGCAGTTGGGTCTCCCATTTGCCAGATCTCGCGTTTCGGGAGGTGGTCGGCCACGGAATGAACGCGGCAGAACTG
GCGAAAAACCGTCGTCTGGATCGCTATTTTGTTCAAAACCTCAATGTCGATCCCAAATTACCCTTGGCCGATCAAAGCTT
TGAGGCGGTTTTGGTGGCGGTCTCGGTGCAATATCTCCAATATCCAGAGGCGGTGTTTGCAGAAATTCAACGGGTGCTGA
CCCCAGGGGGAATTTGTATTGTTAGTTTTTCAAATCGGATGTTTTACCAAAAGGCGATCGCCGCTTGGCGCGATAGTACC
GACGCAGAGCACCTCCAGCTTGTGCAGCGTTACTTCCAGCAGACCCCAGGCTTTGACAAGCCCACTGTGGTGAAACAACG
TAGCGATCAGCCTCTCCTGTTACAGATGTTGGGCTTGGGCCACCGGGATCCGTTTTATGCGGTGTATGCTCGAAAATAA

Upstream 100 bases:

>100_bases
TACCTTAGAAATATCCATACATCTGTGCCTGAGGGGCAGATTGACTGGGGGTTTCCCCGCATGATCACTAATTTAACGTA
TTCTTTGCGCTGCATTTTCT

Downstream 100 bases:

>100_bases
TCCCCCGGAGCCAGTGTAGAAGAACCGCAACAATTGTTAACTTAATCTGGGTCTTCGGGGAAGGCAAACTATAGTATTAA
GTGGGTACCTTAAAGAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MILSPSQRQKLDSSDDQLFYDYPRFVTHVDDGFIDQLTQLYGTLLQPNDRVLDLMSSWVSHLPDLAFREVVGHGMNAAEL
AKNRRLDRYFVQNLNVDPKLPLADQSFEAVLVAVSVQYLQYPEAVFAEIQRVLTPGGICIVSFSNRMFYQKAIAAWRDST
DAEHLQLVQRYFQQTPGFDKPTVVKQRSDQPLLLQMLGLGHRDPFYAVYARK

Sequences:

>Translated_212_residues
MILSPSQRQKLDSSDDQLFYDYPRFVTHVDDGFIDQLTQLYGTLLQPNDRVLDLMSSWVSHLPDLAFREVVGHGMNAAEL
AKNRRLDRYFVQNLNVDPKLPLADQSFEAVLVAVSVQYLQYPEAVFAEIQRVLTPGGICIVSFSNRMFYQKAIAAWRDST
DAEHLQLVQRYFQQTPGFDKPTVVKQRSDQPLLLQMLGLGHRDPFYAVYARK
>Mature_212_residues
MILSPSQRQKLDSSDDQLFYDYPRFVTHVDDGFIDQLTQLYGTLLQPNDRVLDLMSSWVSHLPDLAFREVVGHGMNAAEL
AKNRRLDRYFVQNLNVDPKLPLADQSFEAVLVAVSVQYLQYPEAVFAEIQRVLTPGGICIVSFSNRMFYQKAIAAWRDST
DAEHLQLVQRYFQQTPGFDKPTVVKQRSDQPLLLQMLGLGHRDPFYAVYARK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24372; Mature: 24372

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILSPSQRQKLDSSDDQLFYDYPRFVTHVDDGFIDQLTQLYGTLLQPNDRVLDLMSSWVS
CCCCCCHHHHCCCCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
HLPDLAFREVVGHGMNAAELAKNRRLDRYFVQNLNVDPKLPLADQSFEAVLVAVSVQYLQ
HCCHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
YPEAVFAEIQRVLTPGGICIVSFSNRMFYQKAIAAWRDSTDAEHLQLVQRYFQQTPGFDK
CCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
PTVVKQRSDQPLLLQMLGLGHRDPFYAVYARK
CCHHHCCCCCHHHHHHHCCCCCCCEEEEEECC
>Mature Secondary Structure
MILSPSQRQKLDSSDDQLFYDYPRFVTHVDDGFIDQLTQLYGTLLQPNDRVLDLMSSWVS
CCCCCCHHHHCCCCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
HLPDLAFREVVGHGMNAAELAKNRRLDRYFVQNLNVDPKLPLADQSFEAVLVAVSVQYLQ
HCCHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
YPEAVFAEIQRVLTPGGICIVSFSNRMFYQKAIAAWRDSTDAEHLQLVQRYFQQTPGFDK
CCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
PTVVKQRSDQPLLLQMLGLGHRDPFYAVYARK
CCHHHCCCCCHHHHHHHCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA