| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is sfsA
Identifier: 170078391
GI number: 170078391
Start: 1871305
End: 1872063
Strand: Reverse
Name: sfsA
Synonym: SYNPCC7002_A1785
Alternate gene names: 170078391
Gene position: 1872063-1871305 (Counterclockwise)
Preceding gene: 170078392
Following gene: 170078388
Centisome position: 62.24
GC content: 51.65
Gene sequence:
>759_bases ATGACCGCGACCACACAGCCTTTTGTTTATCGTTATCCTGGATTGATCCCTGGCATCCTGCGGAAACGCTACAAACGTTT TCTAGCAGACATTGAATTGGCCTCCGGAGAAATCGTTACGGCCCATTGTCCCAATACGGGGCCGATGACGGGGATTTGTG AGTTGGGAGCGCCGGTGATGCTCTCAAAAAGTGATAATCCCAAGCGCAAACTAGCCTATACCTGGGAGATGATCCAGTTA CCCACCCCAGAACCGACCTGGATCGGCGTCAATACAGCGTTACCTAACCGGGTGATCAAAGCGATGCTTTTGGCGAAGCA AATCCCTGAATTAGCCGACCATTACGACACGGTGCGACCGGAGGTGCGCTATGGCACAGAGAACAAAAGTCGCATTGATT TTCTGCTGACAGGGGAAGGGCGATCGCCTCTTTATGTGGAAGTTAAAAATACCACCTGGACAAAGGGAAAACTGGCGCTT TTCCCGGATACTGAAACCACCAGGGGCCAAAAGCACCTCCAAGAACTTATCGACATTGTGCCCGCAGCAAAAGCGGTGAT GCTCTATTTCATCAATCGAGGCGATTGCACCCGATTTGCCCCTGGGGATAGCAAAGACCCGAAATATGGAGAGCTATTCC GTCAGGCGATCGCCGCCGGCATCCAAATTCTTCCCTGTCGCTTTGCGGTTAGTCCAGAGGGCATTTGTTACCTCGGTTTG GCTCCCTGGGAATCAACTGAAATCTCTGGGGTTGGTTAA
Upstream 100 bases:
>100_bases TCACAGAATGGGAATATCAAACCTACGTTCCCCCTGTCTTTGATTGGCAAGATCCCCATTACAAGTTTTAGGGGTGATCG CCAGCTTAATTTTTCCACCG
Downstream 100 bases:
>100_bases TGTTTGGGATCTGCTTCACCAGCGGCAGGCAATGGGCATCCGCCACCCCGTACCAAAGGCTCGATCGGTAATTTTTAAAC CAGGGGCAGCTTGACGGCGC
Product: sugar fermentation stimulation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MTATTQPFVYRYPGLIPGILRKRYKRFLADIELASGEIVTAHCPNTGPMTGICELGAPVMLSKSDNPKRKLAYTWEMIQL PTPEPTWIGVNTALPNRVIKAMLLAKQIPELADHYDTVRPEVRYGTENKSRIDFLLTGEGRSPLYVEVKNTTWTKGKLAL FPDTETTRGQKHLQELIDIVPAAKAVMLYFINRGDCTRFAPGDSKDPKYGELFRQAIAAGIQILPCRFAVSPEGICYLGL APWESTEISGVG
Sequences:
>Translated_252_residues MTATTQPFVYRYPGLIPGILRKRYKRFLADIELASGEIVTAHCPNTGPMTGICELGAPVMLSKSDNPKRKLAYTWEMIQL PTPEPTWIGVNTALPNRVIKAMLLAKQIPELADHYDTVRPEVRYGTENKSRIDFLLTGEGRSPLYVEVKNTTWTKGKLAL FPDTETTRGQKHLQELIDIVPAAKAVMLYFINRGDCTRFAPGDSKDPKYGELFRQAIAAGIQILPCRFAVSPEGICYLGL APWESTEISGVG >Mature_251_residues TATTQPFVYRYPGLIPGILRKRYKRFLADIELASGEIVTAHCPNTGPMTGICELGAPVMLSKSDNPKRKLAYTWEMIQLP TPEPTWIGVNTALPNRVIKAMLLAKQIPELADHYDTVRPEVRYGTENKSRIDFLLTGEGRSPLYVEVKNTTWTKGKLALF PDTETTRGQKHLQELIDIVPAAKAVMLYFINRGDCTRFAPGDSKDPKYGELFRQAIAAGIQILPCRFAVSPEGICYLGLA PWESTEISGVG
Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]
COG id: COG1489
COG function: function code R; DNA-binding protein, stimulates sugar fermentation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sfsA family
Homologues:
Organism=Escherichia coli, GI1786340, Length=224, Percent_Identity=41.5178571428571, Blast_Score=171, Evalue=5e-44,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): SFSA_SYNP2 (B1XPQ9)
Other databases:
- EMBL: CP000951 - RefSeq: YP_001735029.1 - GeneID: 6055622 - GenomeReviews: CP000951_GR - KEGG: syp:SYNPCC7002_A1785 - HOGENOM: HBG655520 - OMA: NTGSMLN - ProtClustDB: PRK00347 - HAMAP: MF_00095 - InterPro: IPR005224 - TIGRFAMs: TIGR00230
Pfam domain/function: PF03749 SfsA
EC number: NA
Molecular weight: Translated: 28015; Mature: 27884
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATTQPFVYRYPGLIPGILRKRYKRFLADIELASGEIVTAHCPNTGPMTGICELGAPVM CCCCCCCEEEECCCCCHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCHHHCCCCEE LSKSDNPKRKLAYTWEMIQLPTPEPTWIGVNTALPNRVIKAMLLAKQIPELADHYDTVRP EECCCCCCCEEEEEEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EVRYGTENKSRIDFLLTGEGRSPLYVEVKNTTWTKGKLALFPDTETTRGQKHLQELIDIV CEEECCCCCCEEEEEEECCCCCCEEEEECCCEECCCEEEECCCCCCCCHHHHHHHHHHHH PAAKAVMLYFINRGDCTRFAPGDSKDPKYGELFRQAIAAGIQILPCRFAVSPEGICYLGL HHHHEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEEE APWESTEISGVG CCCCCCCCCCCC >Mature Secondary Structure TATTQPFVYRYPGLIPGILRKRYKRFLADIELASGEIVTAHCPNTGPMTGICELGAPVM CCCCCCEEEECCCCCHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCHHHCCCCEE LSKSDNPKRKLAYTWEMIQLPTPEPTWIGVNTALPNRVIKAMLLAKQIPELADHYDTVRP EECCCCCCCEEEEEEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EVRYGTENKSRIDFLLTGEGRSPLYVEVKNTTWTKGKLALFPDTETTRGQKHLQELIDIV CEEECCCCCCEEEEEEECCCCCCEEEEECCCEECCCEEEECCCCCCCCHHHHHHHHHHHH PAAKAVMLYFINRGDCTRFAPGDSKDPKYGELFRQAIAAGIQILPCRFAVSPEGICYLGL HHHHEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEEE APWESTEISGVG CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA