| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is devR [H]
Identifier: 170078380
GI number: 170078380
Start: 1860244
End: 1861104
Strand: Direct
Name: devR [H]
Synonym: SYNPCC7002_A1773
Alternate gene names: 170078380
Gene position: 1860244-1861104 (Clockwise)
Preceding gene: 170078379
Following gene: 170078381
Centisome position: 61.84
GC content: 46.69
Gene sequence:
>861_bases ATGTCTCAACATCTTTTTGCCACTATCGTCACCCCCACTGCTGTTGCTGCGAATAACCGGGGGGAGGGCGATGGTAGTAC ATTATCCACGCTTCAAAAAATCACCCGTGGTTATGACCAATACACCACTGTCAGTGCGGAGGCGATCCGGTGGGCATATC GAGAATATTTTCAGTACCATCATGGGGATGAAACCAACCGCAGTTTTGACCCGGACAAAGATATTTACGAGTTTCAGACT GAGAAGTTTAATGCCGAGACATTCATTGACGATGACCTTTTTGGGTACATGGATGCCAAGAAAGGAGCGAAAAATGAGAA TGCGACAACTAAACGCCGAGGTGCTTTAGAAATTAGTCGGGCAATCAGCCTTGATCCCTATTGGGGAGATGTGGCTTTTG GTTCCAAGGGTGGCGAGAAAAATAAAACTTCCATCCATCAAACGGAAGTCCATTGCACAGCCTATCAATACACCCTTGCG GTTACACCGGGACATTTAAAAAAAATTGAGCGGGTAAATTATCTCCTCGATGCCATGCCTTCCATTCGCCATGTGGGTGG TAATCATTCCCGATTCCTATTTGAGTTTCGTCCTGAGTCGATTATCCTGCGGGTCACAGAAGATCCGAGTCCTTGGATTA TGGGCTGCTTTGAACGGGTCAGTGAATCTATTGGTTGTCCCAAATTAGTGCGCCTTGTAGAGGTCAATGATATTCCTGCC AATGAGTTAATCGTTGCGGGGGAAATTGCGGATACGCCCTACGGTCAACAGCTTAAGGAATTGGGCGTAAATGTTTGTCG CGGTGTAAAAGAGGCGATCGCCCTCACAAAGGAATCTTTGCAGATTAAGCTAGAGGCATAA
Upstream 100 bases:
>100_bases TTTGGATCAAACTCTCTCTGAAGCAGAAACCAACGAATCCTTTGAACTCACTCTCTAAACCATTTATACAATCATCACTG AAAAATTAAGGAAAATAATT
Downstream 100 bases:
>100_bases TTTGGGAGAACAACCGATGCTGATCCAAAAAATTATCGATGAACTCCATGAAATTCCTGAGGATAAACTGAATCAGGTCT ATGAACTCATTCATTATTTT
Product: CRISPR-associated autoregulator DevR family protein protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MSQHLFATIVTPTAVAANNRGEGDGSTLSTLQKITRGYDQYTTVSAEAIRWAYREYFQYHHGDETNRSFDPDKDIYEFQT EKFNAETFIDDDLFGYMDAKKGAKNENATTKRRGALEISRAISLDPYWGDVAFGSKGGEKNKTSIHQTEVHCTAYQYTLA VTPGHLKKIERVNYLLDAMPSIRHVGGNHSRFLFEFRPESIILRVTEDPSPWIMGCFERVSESIGCPKLVRLVEVNDIPA NELIVAGEIADTPYGQQLKELGVNVCRGVKEAIALTKESLQIKLEA
Sequences:
>Translated_286_residues MSQHLFATIVTPTAVAANNRGEGDGSTLSTLQKITRGYDQYTTVSAEAIRWAYREYFQYHHGDETNRSFDPDKDIYEFQT EKFNAETFIDDDLFGYMDAKKGAKNENATTKRRGALEISRAISLDPYWGDVAFGSKGGEKNKTSIHQTEVHCTAYQYTLA VTPGHLKKIERVNYLLDAMPSIRHVGGNHSRFLFEFRPESIILRVTEDPSPWIMGCFERVSESIGCPKLVRLVEVNDIPA NELIVAGEIADTPYGQQLKELGVNVCRGVKEAIALTKESLQIKLEA >Mature_285_residues SQHLFATIVTPTAVAANNRGEGDGSTLSTLQKITRGYDQYTTVSAEAIRWAYREYFQYHHGDETNRSFDPDKDIYEFQTE KFNAETFIDDDLFGYMDAKKGAKNENATTKRRGALEISRAISLDPYWGDVAFGSKGGEKNKTSIHQTEVHCTAYQYTLAV TPGHLKKIERVNYLLDAMPSIRHVGGNHSRFLFEFRPESIILRVTEDPSPWIMGCFERVSESIGCPKLVRLVEVNDIPAN ELIVAGEIADTPYGQQLKELGVNVCRGVKEAIALTKESLQIKLEA
Specific function: Has a role in fruiting body development, sporulation and aggregation [H]
COG id: COG1857
COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010154 - InterPro: IPR013414 - InterPro: IPR016581 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32120; Mature: 31989
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQHLFATIVTPTAVAANNRGEGDGSTLSTLQKITRGYDQYTTVSAEAIRWAYREYFQYH CCCCEEEEEECCCEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH HGDETNRSFDPDKDIYEFQTEKFNAETFIDDDLFGYMDAKKGAKNENATTKRRGALEISR CCCCCCCCCCCCCHHHHHHHCCCCCCCEECCHHHHHHHHCCCCCCCCCCHHHCCCEEEHH AISLDPYWGDVAFGSKGGEKNKTSIHQTEVHCTAYQYTLAVTPGHLKKIERVNYLLDAMP HEECCCCCCCEEECCCCCCCCCCCEEEEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHCH SIRHVGGNHSRFLFEFRPESIILRVTEDPSPWIMGCFERVSESIGCPKLVRLVEVNDIPA HHHHCCCCCCEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHCCCHHHEEEEEECCCCC NELIVAGEIADTPYGQQLKELGVNVCRGVKEAIALTKESLQIKLEA CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEC >Mature Secondary Structure SQHLFATIVTPTAVAANNRGEGDGSTLSTLQKITRGYDQYTTVSAEAIRWAYREYFQYH CCCEEEEEECCCEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH HGDETNRSFDPDKDIYEFQTEKFNAETFIDDDLFGYMDAKKGAKNENATTKRRGALEISR CCCCCCCCCCCCCHHHHHHHCCCCCCCEECCHHHHHHHHCCCCCCCCCCHHHCCCEEEHH AISLDPYWGDVAFGSKGGEKNKTSIHQTEVHCTAYQYTLAVTPGHLKKIERVNYLLDAMP HEECCCCCCCEEECCCCCCCCCCCEEEEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHCH SIRHVGGNHSRFLFEFRPESIILRVTEDPSPWIMGCFERVSESIGCPKLVRLVEVNDIPA HHHHCCCCCCEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHCCCHHHEEEEEECCCCC NELIVAGEIADTPYGQQLKELGVNVCRGVKEAIALTKESLQIKLEA CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7693658 [H]