Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078379

Identifier: 170078379

GI number: 170078379

Start: 1858693

End: 1860201

Strand: Direct

Name: 170078379

Synonym: SYNPCC7002_A1772

Alternate gene names: NA

Gene position: 1858693-1860201 (Clockwise)

Preceding gene: 170078378

Following gene: 170078380

Centisome position: 61.79

GC content: 41.35

Gene sequence:

>1509_bases
ATGACAGAGATGATTCTCTCTTTATTCAACCCCAATAGTCTTTTGCCCCATCGGGCAGGGGTGGCGGGTTTGGCATTGGC
TTTATCTGCCATTGACCCTACTGATGCACCATTGCAATGGGAAGTCACGGATGATGCAGTAAAACTGACTTGGGATTGCA
CCGATAAAGAAGCAATTCAATGGTTACTAAAGGAAACTTATCAAATCAAAGATGGTTATCTCAATGTTAAAGCTCTCAAG
TTAGATGACCAAAGTCGTTATATTTTTACGGACGGTGTAACGACAACTTTCTTACAACATAGTAAACAAAGAAGTTTAGA
TAAACAAACTCAATCCCTCAGTTTTCAAGTGGATGAAGGTCAACCCGAAATTCAAGTTAATCATCGACAATTGTTAGATT
GCTATTATACCAGAGACTTCAAAGAAGCTTTTAGCAGTAAGGGTAAATTTCAAAAATCTATTCCTTTGAAAGGTCATCAC
TTACCTGGTCTAGTGGAAGATTTTGCTAATGGAGCTTATCAAGAATCTCCAGAAAATTATTTAGCCTTACTTTTTCTTCC
TATCGCCTGTCATTATTACCGCTTACCCAACTTTTTATCTGGCTTAGTAATTCTCTCAGTCAGCAACCTAAAAGCATGGG
TAAAACGACGAAAAGCCTATGCAGCAAAGACAGTCACTAAACTCAAACCTTATGGAGAATTTCGGGCTAATGGTGCAGGG
GAATCTGCTCTAAGATTTCTTTTGCAGGAAAAACTCATTGAGGATGCCAAAGATTTTAAGGTTGATTACTGTGAGGTTTA
TCGCCTTGGTAAACAGCCTTGGGACGGCAATCAATCCTATTTAAAACAGGAGGTTTATCGGGTTCATGCTAACGATGAAT
TACTTGAGCTTTATCGGGAAGCTTGGGGACTTTTTCCTAGTGTGGTTCGCGAAACTGACAAGGGGGAAACATGGCTCGCC
CATTCTAAAGTTTTGCCTTGGATTGCCGATAACTTAATCAAGGGCGATCGCTGGTATCAGGGATTTTTTGAATTCCGTAA
AGCTAATGAAATTTATGAACGTACAGGATTAGTCAAGATGACCAAAATTGAAAACGCACTGACATCACAAGAACAAATTT
TCTTTGATGCGATTCAGGGAGGGTTTAGTACTTTTTTGCGAGGACAGATTGAACAGGCTACAAAACAAGGCCGCAAGCTT
GATTATGCCCAAGTTACCAAAAAGGTCATCTATCGTTTTCAACGTCCGAGCACTCAACAGGAATTTGCTTCGGCGGTCGT
GGATTTTCTCAGTCAATTTCGTAGTAGGGCAGCACGAGGTTCGGGTTCCGAGATTTATCTCTGGCTTCACCGCGATCGCC
AATGGAAACAAGCCCGTGATTTAGCACTTTTGGCGATCGCCACCTATGAGGGCAAAAACAAACAAGGTGAAACGGAAGTG
CCGGAGGAGATTTTGGATCAAACTCTCTCTGAAGCAGAAACCAACGAATCCTTTGAACTCACTCTCTAA

Upstream 100 bases:

>100_bases
AGGAAAAACACAAATTTTATCCCATCGCTCCCGCTAATATTTGGGGCTATTCCGAAGAAAAAGGAGCCTTTGATTTGAGA
AAACAAGGAGGTGATGTGTC

Downstream 100 bases:

>100_bases
ACCATTTATACAATCATCACTGAAAAATTAAGGAAAATAATTATGTCTCAACATCTTTTTGCCACTATCGTCACCCCCAC
TGCTGTTGCTGCGAATAACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 502; Mature: 501

Protein sequence:

>502_residues
MTEMILSLFNPNSLLPHRAGVAGLALALSAIDPTDAPLQWEVTDDAVKLTWDCTDKEAIQWLLKETYQIKDGYLNVKALK
LDDQSRYIFTDGVTTTFLQHSKQRSLDKQTQSLSFQVDEGQPEIQVNHRQLLDCYYTRDFKEAFSSKGKFQKSIPLKGHH
LPGLVEDFANGAYQESPENYLALLFLPIACHYYRLPNFLSGLVILSVSNLKAWVKRRKAYAAKTVTKLKPYGEFRANGAG
ESALRFLLQEKLIEDAKDFKVDYCEVYRLGKQPWDGNQSYLKQEVYRVHANDELLELYREAWGLFPSVVRETDKGETWLA
HSKVLPWIADNLIKGDRWYQGFFEFRKANEIYERTGLVKMTKIENALTSQEQIFFDAIQGGFSTFLRGQIEQATKQGRKL
DYAQVTKKVIYRFQRPSTQQEFASAVVDFLSQFRSRAARGSGSEIYLWLHRDRQWKQARDLALLAIATYEGKNKQGETEV
PEEILDQTLSEAETNESFELTL

Sequences:

>Translated_502_residues
MTEMILSLFNPNSLLPHRAGVAGLALALSAIDPTDAPLQWEVTDDAVKLTWDCTDKEAIQWLLKETYQIKDGYLNVKALK
LDDQSRYIFTDGVTTTFLQHSKQRSLDKQTQSLSFQVDEGQPEIQVNHRQLLDCYYTRDFKEAFSSKGKFQKSIPLKGHH
LPGLVEDFANGAYQESPENYLALLFLPIACHYYRLPNFLSGLVILSVSNLKAWVKRRKAYAAKTVTKLKPYGEFRANGAG
ESALRFLLQEKLIEDAKDFKVDYCEVYRLGKQPWDGNQSYLKQEVYRVHANDELLELYREAWGLFPSVVRETDKGETWLA
HSKVLPWIADNLIKGDRWYQGFFEFRKANEIYERTGLVKMTKIENALTSQEQIFFDAIQGGFSTFLRGQIEQATKQGRKL
DYAQVTKKVIYRFQRPSTQQEFASAVVDFLSQFRSRAARGSGSEIYLWLHRDRQWKQARDLALLAIATYEGKNKQGETEV
PEEILDQTLSEAETNESFELTL
>Mature_501_residues
TEMILSLFNPNSLLPHRAGVAGLALALSAIDPTDAPLQWEVTDDAVKLTWDCTDKEAIQWLLKETYQIKDGYLNVKALKL
DDQSRYIFTDGVTTTFLQHSKQRSLDKQTQSLSFQVDEGQPEIQVNHRQLLDCYYTRDFKEAFSSKGKFQKSIPLKGHHL
PGLVEDFANGAYQESPENYLALLFLPIACHYYRLPNFLSGLVILSVSNLKAWVKRRKAYAAKTVTKLKPYGEFRANGAGE
SALRFLLQEKLIEDAKDFKVDYCEVYRLGKQPWDGNQSYLKQEVYRVHANDELLELYREAWGLFPSVVRETDKGETWLAH
SKVLPWIADNLIKGDRWYQGFFEFRKANEIYERTGLVKMTKIENALTSQEQIFFDAIQGGFSTFLRGQIEQATKQGRKLD
YAQVTKKVIYRFQRPSTQQEFASAVVDFLSQFRSRAARGSGSEIYLWLHRDRQWKQARDLALLAIATYEGKNKQGETEVP
EEILDQTLSEAETNESFELTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57791; Mature: 57660

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEMILSLFNPNSLLPHRAGVAGLALALSAIDPTDAPLQWEVTDDAVKLTWDCTDKEAIQ
CHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCHHHHH
WLLKETYQIKDGYLNVKALKLDDQSRYIFTDGVTTTFLQHSKQRSLDKQTQSLSFQVDEG
HHHHHHHHHCCCEEEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCEEEECCC
QPEIQVNHRQLLDCYYTRDFKEAFSSKGKFQKSIPLKGHHLPGLVEDFANGAYQESPENY
CCCEEECHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHCCCCCCCCCHHH
LALLFLPIACHYYRLPNFLSGLVILSVSNLKAWVKRRKAYAAKTVTKLKPYGEFRANGAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
ESALRFLLQEKLIEDAKDFKVDYCEVYRLGKQPWDGNQSYLKQEVYRVHANDELLELYRE
HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
AWGLFPSVVRETDKGETWLAHSKVLPWIADNLIKGDRWYQGFFEFRKANEIYERTGLVKM
HHCCCHHHHHHCCCCCEEEHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEE
TKIENALTSQEQIFFDAIQGGFSTFLRGQIEQATKQGRKLDYAQVTKKVIYRFQRPSTQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHH
EFASAVVDFLSQFRSRAARGSGSEIYLWLHRDRQWKQARDLALLAIATYEGKNKQGETEV
HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHCEEEEEEEEECCCCCCCCCCC
PEEILDQTLSEAETNESFELTL
CHHHHHHHHHHHCCCCCEEEEC
>Mature Secondary Structure 
TEMILSLFNPNSLLPHRAGVAGLALALSAIDPTDAPLQWEVTDDAVKLTWDCTDKEAIQ
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCHHHHH
WLLKETYQIKDGYLNVKALKLDDQSRYIFTDGVTTTFLQHSKQRSLDKQTQSLSFQVDEG
HHHHHHHHHCCCEEEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCEEEECCC
QPEIQVNHRQLLDCYYTRDFKEAFSSKGKFQKSIPLKGHHLPGLVEDFANGAYQESPENY
CCCEEECHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHCCCCCCCCCHHH
LALLFLPIACHYYRLPNFLSGLVILSVSNLKAWVKRRKAYAAKTVTKLKPYGEFRANGAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
ESALRFLLQEKLIEDAKDFKVDYCEVYRLGKQPWDGNQSYLKQEVYRVHANDELLELYRE
HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
AWGLFPSVVRETDKGETWLAHSKVLPWIADNLIKGDRWYQGFFEFRKANEIYERTGLVKM
HHCCCHHHHHHCCCCCEEEHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEE
TKIENALTSQEQIFFDAIQGGFSTFLRGQIEQATKQGRKLDYAQVTKKVIYRFQRPSTQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHH
EFASAVVDFLSQFRSRAARGSGSEIYLWLHRDRQWKQARDLALLAIATYEGKNKQGETEV
HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHCEEEEEEEEECCCCCCCCCCC
PEEILDQTLSEAETNESFELTL
CHHHHHHHHHHHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA