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The map label for this gene is 170078377

Identifier: 170078377

GI number: 170078377

Start: 1855750

End: 1856415

Strand: Direct

Name: 170078377

Synonym: SYNPCC7002_A1770

Alternate gene names: NA

Gene position: 1855750-1856415 (Clockwise)

Preceding gene: 170078376

Following gene: 170078378

Centisome position: 61.69

GC content: 46.1

Gene sequence:

>666_bases
ATGAATTTTTTGGAAGTGCAGTTTGAGCTGCGGGGTAAAACGCTGCCTGCGGATCATGGTTACAGCCTCTATTCTGGGAT
TAAACAGATTTGGCAACAGTCGGCATTAATCCCCGAACTGAATGAAGATATTTCCCCAGAGGTCTTAATCAGTAGTATTT
CAGGGGTGGGGAATAAGCAGGGCATGATTTATCTAAATCGGCGATCTCGGTTTCGGTTGCGATGTCCGGCGGAACAGGCT
CAGGTTTGGTATCGGGTTCTGCAAAATCAAGTCCTCGATCTTCAGGGTCATTTGGTGCGTTTGATTCAACCTCGTTTAAC
CGTTATTCAACCAGCCTCTACCCTGACTTCACGGTTAGTCGTTATCAAATTAGAGCAATGGGATAACCATACTGCACCTC
AATATTTTCTGGAGTCCTGCCAAAAGGGTTTGGAACGCCTAGAAATCGAAGGTCAGCCTTTTATTGAAAGTTTGCCAGAT
GGTGATTTGGCGCGGCGATCGCTCCGCATTAAGGGTAAGCACATTATGGGTTTTGGCGTGACTGTCGAAGGCTTAAGTGA
CAACGATTCTATTAAGTTGCAATGCCTAGGCTTAGGCGGTCGGGGTCATTTTGGTTGTGGTTGGTTCTATCCGAAAAAAG
AGGAGGAACAAACTAATGCAGCCTAA

Upstream 100 bases:

>100_bases
CAGAGGGGCGATCGCCAAATCTCCTCCGGAACTGGTGAATATGCTGGAACGGGAAACAGCACAGATGGCACGGCAAAACG
AAACAGGAGAATTTAAGTAG

Downstream 100 bases:

>100_bases
ACTCAAACCCAATTGTCTCCTCGCAAAATCCTTTGAACCTGGTCACTGGAAAGGTTCCTATAGTTTGGTGGGTCACACTG
CTGATGTGGTCAATGCCATA

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Cas6 Family Protein; CRISPR-Associated Protein Cas6-Related Protein

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MNFLEVQFELRGKTLPADHGYSLYSGIKQIWQQSALIPELNEDISPEVLISSISGVGNKQGMIYLNRRSRFRLRCPAEQA
QVWYRVLQNQVLDLQGHLVRLIQPRLTVIQPASTLTSRLVVIKLEQWDNHTAPQYFLESCQKGLERLEIEGQPFIESLPD
GDLARRSLRIKGKHIMGFGVTVEGLSDNDSIKLQCLGLGGRGHFGCGWFYPKKEEEQTNAA

Sequences:

>Translated_221_residues
MNFLEVQFELRGKTLPADHGYSLYSGIKQIWQQSALIPELNEDISPEVLISSISGVGNKQGMIYLNRRSRFRLRCPAEQA
QVWYRVLQNQVLDLQGHLVRLIQPRLTVIQPASTLTSRLVVIKLEQWDNHTAPQYFLESCQKGLERLEIEGQPFIESLPD
GDLARRSLRIKGKHIMGFGVTVEGLSDNDSIKLQCLGLGGRGHFGCGWFYPKKEEEQTNAA
>Mature_221_residues
MNFLEVQFELRGKTLPADHGYSLYSGIKQIWQQSALIPELNEDISPEVLISSISGVGNKQGMIYLNRRSRFRLRCPAEQA
QVWYRVLQNQVLDLQGHLVRLIQPRLTVIQPASTLTSRLVVIKLEQWDNHTAPQYFLESCQKGLERLEIEGQPFIESLPD
GDLARRSLRIKGKHIMGFGVTVEGLSDNDSIKLQCLGLGGRGHFGCGWFYPKKEEEQTNAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25063; Mature: 25063

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFLEVQFELRGKTLPADHGYSLYSGIKQIWQQSALIPELNEDISPEVLISSISGVGNKQ
CCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCC
GMIYLNRRSRFRLRCPAEQAQVWYRVLQNQVLDLQGHLVRLIQPRLTVIQPASTLTSRLV
CEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHCEEE
VIKLEQWDNHTAPQYFLESCQKGLERLEIEGQPFIESLPDGDLARRSLRIKGKHIMGFGV
EEEEECCCCCCCHHHHHHHHHHHHHHEECCCCCHHHHCCCCHHHHHHEEECCCEEEEECE
TVEGLSDNDSIKLQCLGLGGRGHFGCGWFYPKKEEEQTNAA
EEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNFLEVQFELRGKTLPADHGYSLYSGIKQIWQQSALIPELNEDISPEVLISSISGVGNKQ
CCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCC
GMIYLNRRSRFRLRCPAEQAQVWYRVLQNQVLDLQGHLVRLIQPRLTVIQPASTLTSRLV
CEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHCEEE
VIKLEQWDNHTAPQYFLESCQKGLERLEIEGQPFIESLPDGDLARRSLRIKGKHIMGFGV
EEEEECCCCCCCHHHHHHHHHHHHHHEECCCCCHHHHCCCCHHHHHHEEECCCEEEEECE
TVEGLSDNDSIKLQCLGLGGRGHFGCGWFYPKKEEEQTNAA
EEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA