| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078362
Identifier: 170078362
GI number: 170078362
Start: 1841441
End: 1842061
Strand: Reverse
Name: 170078362
Synonym: SYNPCC7002_A1755
Alternate gene names: NA
Gene position: 1842061-1841441 (Counterclockwise)
Preceding gene: 170078365
Following gene: 170078360
Centisome position: 61.24
GC content: 48.79
Gene sequence:
>621_bases ATGCTGACAAAACAACGGGCGGATCGGGTGCTGTTGAGTAATATCAGTTGGCAACAGTTTGAGAATATCCTGCGGGATTT GGGAGAAAGCCGTGCCAGTCGCGTGGCCTACTGTGATGGAGCTTTAGAAATTATGACGCCCCTCCCTGAACATGAATTTT ATAAAGAGGCGATCGGTGATGCGATCAAAGATTGCGCCGATGAACTAGAAATTGATTATGAAAGTCTCGGCTCAACCACC TGGCGCAAACCGGCGGCCAAAGCAGGTTTAGAACCGGACAATTGTTTTTACTTCCAGCATGAACCCTTGATCCGGGGCCA GTTGGACTATGACCTCGCTAAAGATCCGCCTCCCGATTTGGCTTTAGAAATTGAACTGACAAGCCGCTCTTTAGAACGGT TTCCCATCTATGCACGGTTAGGAGTGCCGGAAATTTGGAGCTATGAGGATGGCAAAATAACCATTTATCTCCTTGACCAG GGAGAATATCGCGTTTCAGAAACGAGTTTGGCCCTGCCGCAAATTTCAGTGACAAAAATGATGGCTTTGATCGAAGAAAA TCGTCCCTTAGGTCGTCGGGCGATCCGCCGCGCCATTCGGGAGTGGGCAAAAACCCTGTAA
Upstream 100 bases:
>100_bases CCATGGCTTTTCCCGTGAATCTCGGTGAAAAAAGGCGATCGCCAACGTCCTGGGATTCATTAAATAGAATGGAGGGTGAT CGGCAAGGGGAGATAAAGTG
Downstream 100 bases:
>100_bases TCCTTAAACCATCAATCATTATCGCCAATGTGAAACACTTAATAGATTAATTTCTCAAATCGAGAGGTGATTGACAGGAT GCTCTCTCGCCTTGTGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MLTKQRADRVLLSNISWQQFENILRDLGESRASRVAYCDGALEIMTPLPEHEFYKEAIGDAIKDCADELEIDYESLGSTT WRKPAAKAGLEPDNCFYFQHEPLIRGQLDYDLAKDPPPDLALEIELTSRSLERFPIYARLGVPEIWSYEDGKITIYLLDQ GEYRVSETSLALPQISVTKMMALIEENRPLGRRAIRRAIREWAKTL
Sequences:
>Translated_206_residues MLTKQRADRVLLSNISWQQFENILRDLGESRASRVAYCDGALEIMTPLPEHEFYKEAIGDAIKDCADELEIDYESLGSTT WRKPAAKAGLEPDNCFYFQHEPLIRGQLDYDLAKDPPPDLALEIELTSRSLERFPIYARLGVPEIWSYEDGKITIYLLDQ GEYRVSETSLALPQISVTKMMALIEENRPLGRRAIRRAIREWAKTL >Mature_206_residues MLTKQRADRVLLSNISWQQFENILRDLGESRASRVAYCDGALEIMTPLPEHEFYKEAIGDAIKDCADELEIDYESLGSTT WRKPAAKAGLEPDNCFYFQHEPLIRGQLDYDLAKDPPPDLALEIELTSRSLERFPIYARLGVPEIWSYEDGKITIYLLDQ GEYRVSETSLALPQISVTKMMALIEENRPLGRRAIRRAIREWAKTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23666; Mature: 23666
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTKQRADRVLLSNISWQQFENILRDLGESRASRVAYCDGALEIMTPLPEHEFYKEAIGD CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCEEEECCCHHHHHCCCCCHHHHHHHHHH AIKDCADELEIDYESLGSTTWRKPAAKAGLEPDNCFYFQHEPLIRGQLDYDLAKDPPPDL HHHHHHHHHCCCHHHCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCE ALEIELTSRSLERFPIYARLGVPEIWSYEDGKITIYLLDQGEYRVSETSLALPQISVTKM EEEEEECCCCHHHCCEEEECCCCCCCCCCCCEEEEEEECCCCEEECHHHHCCCCHHHHHH MALIEENRPLGRRAIRRAIREWAKTL HHHHHCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLTKQRADRVLLSNISWQQFENILRDLGESRASRVAYCDGALEIMTPLPEHEFYKEAIGD CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCEEEECCCHHHHHCCCCCHHHHHHHHHH AIKDCADELEIDYESLGSTTWRKPAAKAGLEPDNCFYFQHEPLIRGQLDYDLAKDPPPDL HHHHHHHHHCCCHHHCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCE ALEIELTSRSLERFPIYARLGVPEIWSYEDGKITIYLLDQGEYRVSETSLALPQISVTKM EEEEEECCCCHHHCCEEEECCCCCCCCCCCCEEEEEEECCCCEEECHHHHCCCCHHHHHH MALIEENRPLGRRAIRRAIREWAKTL HHHHHCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA