| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is ssuA [C]
Identifier: 170078355
GI number: 170078355
Start: 1833810
End: 1834883
Strand: Direct
Name: ssuA [C]
Synonym: SYNPCC7002_A1748
Alternate gene names: 170078355
Gene position: 1833810-1834883 (Clockwise)
Preceding gene: 170078354
Following gene: 170078356
Centisome position: 60.96
GC content: 47.21
Gene sequence:
>1074_bases TTGATCCCTTGCGTTTATTCTTGTCATTTTCCTATGCTAAAACTGCCTAGTCTTCTGATCCGACCGGCGCTATTTTGTGC GGGTCTTGCCTTGACCATCGGCTGCCAAAGTACACCGCCCACAACAACAGGTGAAACTCCGGAAACTCCAACAGCGGAAA CAGAAACAATTACCCTTGGTTTTAGCGCATGGCCCGGTTGGTTTCCTTGGCAAATTGCCGCAGAAAAAGGCCTATTTGAA GCGAATGGCGTTGATGTAAACTTGACTTGGTTTGATGGTTATTTAGATTCAATTAATGCTTTTGCGGCGGGACAGCTAGA CGCAAATACCCAAACCCTGAATGACACGATTAGTTCAGTGGCAGCGGGTTCTGAACAAGTGATTGTTCTGGTGAATGATA ACTCCACAGGGAATGATCAAATTATTGTCAGCGAAGGCATTAATAGTATTGAGGATTTACAGGGAAAAACCATCGCCATT GAAGAGGGCACCGTCGATCATTTTCTCCTATTGCTGGCACTCCAGGAAGCTGGCCTTGGCCCCGATGATGTGATTATCAA ACCCCTAGAAACGGGGGCCGCCGCTGCTGCATTTGTCGCTGGTCAGGTGGATGCGGTGGGAGCCTTTGCCCCTTTTACGA CCCAGGCTTTAGAGCGGGAAGGCAGTAAAATCCTCATTTCTTCGGCAGATTTTCCGGGGGCAATTCCGGATCATTTGGTG GTCAGTCGTGAGCTAATTCAAAATAATCCCGAAGCGGTTCAAGGGTTAGTGGATACTTGGTTTGCGGTGCTAGATTTCAT TGAAGAAAATCCAGAGGAAGCCCTGGAAATCATGGCGGCGCGAGCCAATGTTTCCGTCGAAGAATATCAAGAATATGATG CGGGAACGACAATTTTTAGCCTTGAAGATAACCTAATAGCCTTTGATTCTACAGAAGAAAGCATGATCTCCCTGAACTAC GCCGCCCAGGAAATTAATACTTTCTTGGTGGATGCGGGGTTAATTGAGGCGCCAGCGGATCTCAGTGGTTTATTTGACCC TTCTTTCGTTAAAGCCTACGCAGAAAAACAGTAG
Upstream 100 bases:
>100_bases TGGGTTAAAAAAAGTTGTCATCGGGAAGATGTAATGAAAGTTACAGCATAATTTGTCCGAAAACAGGATAAACAACAGGC AAGGTGCGATCGCCTTTTAA
Downstream 100 bases:
>100_bases CTTTTTGCATCCCTCGGTCTTCTCACTCCGGGGGATTTTTAAAATCCATTATTTTGGCGATCGCCATGACTAAAGCGCCC GTTATCAAACCCTCTTTCCG
Product: ABC transporter, nitrate-like substrate binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MIPCVYSCHFPMLKLPSLLIRPALFCAGLALTIGCQSTPPTTTGETPETPTAETETITLGFSAWPGWFPWQIAAEKGLFE ANGVDVNLTWFDGYLDSINAFAAGQLDANTQTLNDTISSVAAGSEQVIVLVNDNSTGNDQIIVSEGINSIEDLQGKTIAI EEGTVDHFLLLLALQEAGLGPDDVIIKPLETGAAAAAFVAGQVDAVGAFAPFTTQALEREGSKILISSADFPGAIPDHLV VSRELIQNNPEAVQGLVDTWFAVLDFIEENPEEALEIMAARANVSVEEYQEYDAGTTIFSLEDNLIAFDSTEESMISLNY AAQEINTFLVDAGLIEAPADLSGLFDPSFVKAYAEKQ
Sequences:
>Translated_357_residues MIPCVYSCHFPMLKLPSLLIRPALFCAGLALTIGCQSTPPTTTGETPETPTAETETITLGFSAWPGWFPWQIAAEKGLFE ANGVDVNLTWFDGYLDSINAFAAGQLDANTQTLNDTISSVAAGSEQVIVLVNDNSTGNDQIIVSEGINSIEDLQGKTIAI EEGTVDHFLLLLALQEAGLGPDDVIIKPLETGAAAAAFVAGQVDAVGAFAPFTTQALEREGSKILISSADFPGAIPDHLV VSRELIQNNPEAVQGLVDTWFAVLDFIEENPEEALEIMAARANVSVEEYQEYDAGTTIFSLEDNLIAFDSTEESMISLNY AAQEINTFLVDAGLIEAPADLSGLFDPSFVKAYAEKQ >Mature_357_residues MIPCVYSCHFPMLKLPSLLIRPALFCAGLALTIGCQSTPPTTTGETPETPTAETETITLGFSAWPGWFPWQIAAEKGLFE ANGVDVNLTWFDGYLDSINAFAAGQLDANTQTLNDTISSVAAGSEQVIVLVNDNSTGNDQIIVSEGINSIEDLQGKTIAI EEGTVDHFLLLLALQEAGLGPDDVIIKPLETGAAAAAFVAGQVDAVGAFAPFTTQALEREGSKILISSADFPGAIPDHLV VSRELIQNNPEAVQGLVDTWFAVLDFIEENPEEALEIMAARANVSVEEYQEYDAGTTIFSLEDNLIAFDSTEESMISLNY AAQEINTFLVDAGLIEAPADLSGLFDPSFVKAYAEKQ
Specific function: Probably part of an ABC transporter complex [H]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
Organism=Escherichia coli, GI87081803, Length=251, Percent_Identity=25.0996015936255, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010067 - InterPro: IPR015168 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 38131; Mature: 38131
Theoretical pI: Translated: 3.59; Mature: 3.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPCVYSCHFPMLKLPSLLIRPALFCAGLALTIGCQSTPPTTTGETPETPTAETETITLG CCCCEEECCCCHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCCCCCCCEEEEEE FSAWPGWFPWQIAAEKGLFEANGVDVNLTWFDGYLDSINAFAAGQLDANTQTLNDTISSV ECCCCCCCCEEEHHCCCCEECCCEEEEEEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHH AAGSEQVIVLVNDNSTGNDQIIVSEGINSIEDLQGKTIAIEEGTVDHFLLLLALQEAGLG HCCCCEEEEEECCCCCCCCEEEEECCCCHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCC PDDVIIKPLETGAAAAAFVAGQVDAVGAFAPFTTQALEREGSKILISSADFPGAIPDHLV CCCEEEEECCCCCHHHHHHHCCCHHCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCHHHH VSRELIQNNPEAVQGLVDTWFAVLDFIEENPEEALEIMAARANVSVEEYQEYDAGTTIFS HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHCCCCCEEEE LEDNLIAFDSTEESMISLNYAAQEINTFLVDAGLIEAPADLSGLFDPSFVKAYAEKQ ECCCEEEECCCCCCEEEHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MIPCVYSCHFPMLKLPSLLIRPALFCAGLALTIGCQSTPPTTTGETPETPTAETETITLG CCCCEEECCCCHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCCCCCCCEEEEEE FSAWPGWFPWQIAAEKGLFEANGVDVNLTWFDGYLDSINAFAAGQLDANTQTLNDTISSV ECCCCCCCCEEEHHCCCCEECCCEEEEEEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHH AAGSEQVIVLVNDNSTGNDQIIVSEGINSIEDLQGKTIAIEEGTVDHFLLLLALQEAGLG HCCCCEEEEEECCCCCCCCEEEEECCCCHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCC PDDVIIKPLETGAAAAAFVAGQVDAVGAFAPFTTQALEREGSKILISSADFPGAIPDHLV CCCEEEEECCCCCHHHHHHHCCCHHCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCHHHH VSRELIQNNPEAVQGLVDTWFAVLDFIEENPEEALEIMAARANVSVEEYQEYDAGTTIFS HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHCCCCCEEEE LEDNLIAFDSTEESMISLNYAAQEINTFLVDAGLIEAPADLSGLFDPSFVKAYAEKQ ECCCEEEECCCCCCEEEHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]