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The map label for this gene is yfkH [H]

Identifier: 170078320

GI number: 170078320

Start: 1799334

End: 1800533

Strand: Direct

Name: yfkH [H]

Synonym: SYNPCC7002_A1713

Alternate gene names: 170078320

Gene position: 1799334-1800533 (Clockwise)

Preceding gene: 170078317

Following gene: 170078324

Centisome position: 59.82

GC content: 50.25

Gene sequence:

>1200_bases
ATGAAACGTTTTTTGCGATTTTTTTTATTTCTTAATCACCGAACGCTGTATTGGACGATCCGCCAGGCGTTACGACGGCG
ACTGTTGGGGCTTTCGGCGGAGATTGCCTTTAACGTCATGCTGTCCTTGTTCCCGACGATCATTATGGCGTTGACGGCCC
TAGGCTTATTCACGGCCACCCTCGATAACCAAACCATTCTACAGTTGGCGAGCTATTACGAAGATGTGATGCCGGTGTCG
GTATGGACGCTCCTGCGAGAGTTCGCGGCAGAAATTAGCAAAACTCCCAGTAAAAGTTTATTTTCGGTGAGTTTTGTCGC
GACGATCTGGGTCTCGTCCGGAGCGCTGAGTGCGGCAATGAATGCCCTCGATCAAATCCACGAAATCCCCCCGGAACAAC
GGCGTCCTTTCTGGAAAGCAAAGTTGATGTCGATTTTTATTACCCTGGGGGCGATCGCCCTTTTGATTTTTGCCTCATTT
CTGGTGCTGGTGGGCGATAGCGTCATTAAAGTCGGGCTCGATTTAATTGTGCGCTTACCTGTAGATACGACGGGGGTCAA
TGTCCTGGTCACCCTCTGGCGGCTATTGAGTTTCCCGTTAGCGTTGGGGTTAGGGACGGGCATTATTGCGATGGTGATTA
ACATTCTGACGAGTCCCCCTGATCGACGTCATCCCCTGCGCAAACTCAAACAGATGTCCTTTGGTTTAGTGATCGCCCTC
ATTGCCTTTTTCGCCCTGTGTTTTTCGATTCTCTTTATCCAAAATCTGATTGTCGATATGGAGATCAACTACGATCTGGC
AAATCTGTTGGTCATTCTCTGGCGTTTTTTGAGCCTGCCCGTCGCCTTGGCGATCGTTTCCATTGCCTTTGCTTTTATTT
ACAGCATGGGTTCTAGTCGCCTGATTAAAGGGATGCCCATTTTGCCCGGTGCCGTTCTGGGAGCTGTTTCCTGGGCGATT
ATCTCTTCTCTATTTCGCCTCTATGTTGCCAACTTTGGCCAATATAACCGTGTCTATGGGGCTGTGGGGACGGCGATTAT
TCTGATGCTTTGGCTCCAACTCAGCGCCCTGGTGATGCTCCTAGGGGATCAGCTTAATGTCGTTGTCGGCGAAGCCATGC
TTGCAGATGCCCTCAAACGCGGCGATCGCCAACTCAACAAAAATCCCCCACTGCCAGAAGAAGCACCAGGGGAAATTTAA

Upstream 100 bases:

>100_bases
ATAGGTAGTGGTACTGTACTTCTTGGAATCTCAAAATGTTTCAGCAAATGCAGCTGCATAAACACGCCCCAAAAAATATG
TTGCCCCGATCGGTCAGGCG

Downstream 100 bases:

>100_bases
TTAGCTTTTTAGGTTTAGGACGTCAGTACGCAAGAAAACTAGGCAACTGTTGCCGTGGCCAGTTCCTGTTTGAGAATATC
TACCTTGTCCAAACGTTCCC

Product: ribonuclease BN-like family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MKRFLRFFLFLNHRTLYWTIRQALRRRLLGLSAEIAFNVMLSLFPTIIMALTALGLFTATLDNQTILQLASYYEDVMPVS
VWTLLREFAAEISKTPSKSLFSVSFVATIWVSSGALSAAMNALDQIHEIPPEQRRPFWKAKLMSIFITLGAIALLIFASF
LVLVGDSVIKVGLDLIVRLPVDTTGVNVLVTLWRLLSFPLALGLGTGIIAMVINILTSPPDRRHPLRKLKQMSFGLVIAL
IAFFALCFSILFIQNLIVDMEINYDLANLLVILWRFLSLPVALAIVSIAFAFIYSMGSSRLIKGMPILPGAVLGAVSWAI
ISSLFRLYVANFGQYNRVYGAVGTAIILMLWLQLSALVMLLGDQLNVVVGEAMLADALKRGDRQLNKNPPLPEEAPGEI

Sequences:

>Translated_399_residues
MKRFLRFFLFLNHRTLYWTIRQALRRRLLGLSAEIAFNVMLSLFPTIIMALTALGLFTATLDNQTILQLASYYEDVMPVS
VWTLLREFAAEISKTPSKSLFSVSFVATIWVSSGALSAAMNALDQIHEIPPEQRRPFWKAKLMSIFITLGAIALLIFASF
LVLVGDSVIKVGLDLIVRLPVDTTGVNVLVTLWRLLSFPLALGLGTGIIAMVINILTSPPDRRHPLRKLKQMSFGLVIAL
IAFFALCFSILFIQNLIVDMEINYDLANLLVILWRFLSLPVALAIVSIAFAFIYSMGSSRLIKGMPILPGAVLGAVSWAI
ISSLFRLYVANFGQYNRVYGAVGTAIILMLWLQLSALVMLLGDQLNVVVGEAMLADALKRGDRQLNKNPPLPEEAPGEI
>Mature_399_residues
MKRFLRFFLFLNHRTLYWTIRQALRRRLLGLSAEIAFNVMLSLFPTIIMALTALGLFTATLDNQTILQLASYYEDVMPVS
VWTLLREFAAEISKTPSKSLFSVSFVATIWVSSGALSAAMNALDQIHEIPPEQRRPFWKAKLMSIFITLGAIALLIFASF
LVLVGDSVIKVGLDLIVRLPVDTTGVNVLVTLWRLLSFPLALGLGTGIIAMVINILTSPPDRRHPLRKLKQMSFGLVIAL
IAFFALCFSILFIQNLIVDMEINYDLANLLVILWRFLSLPVALAIVSIAFAFIYSMGSSRLIKGMPILPGAVLGAVSWAI
ISSLFRLYVANFGQYNRVYGAVGTAIILMLWLQLSALVMLLGDQLNVVVGEAMLADALKRGDRQLNKNPPLPEEAPGEI

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 44230; Mature: 44230

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure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HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]