Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078324

Identifier: 170078324

GI number: 170078324

Start: 1803590

End: 1804111

Strand: Direct

Name: 170078324

Synonym: SYNPCC7002_A1717

Alternate gene names: NA

Gene position: 1803590-1804111 (Clockwise)

Preceding gene: 170078320

Following gene: 170078325

Centisome position: 59.96

GC content: 48.28

Gene sequence:

>522_bases
ATGGGGCGATCGCTAGATTGTTACGTTGAGAATGAAATTACCCAGGATGGCACTGAATACTATTTTTTGATGCCAGTAGA
CCAGCCAGTGGTGATCCTCGCTTGGGACGAAGATGAAGCCGATGAGAGCGATTTACCGGAAACGGAACTGGTTGAAGATC
CAGAGGAACTTGCAGAAATTTTTCCCGATGCCAAGGCGGTACTGGCAGAACATGATTTAATCCTCCAGGATACAGCCCAT
GTGATGACCGTCCGTGGTGAGTTGCCCCCCCTGGAAGAGGATAAAATTCTCTCTTTAGAGATTGAAGATGATGACTTTGA
AGACGAAGAGCTAGAGGCCGAAGAGTTACAGGAATTAGCACGCTTCTACCACCTCGACCAACTGTATAGCATCTACACGC
CCCTAGAGCCGATTCCCATTTTTGTGAAGGTGACCGAGGATGAAGAAATGGAGATCCTCGAACCTGGGGATCCGATGATC
CAGAGTTTAGTTGATACGCTCCTGCTCCAAGATGCCGACTAA

Upstream 100 bases:

>100_bases
ATTTCTGTTCCTTTTTTGCCAGCCACTGTCTATGTCTTCGCCTTCTTTTGATTCCGGACGGGAGCTTGATGCTCAGGACA
TCGTTACCCTCACCGATGCC

Downstream 100 bases:

>100_bases
TGCGCCCCCCAAAACGCAACCCTTAGCACAGCGAAAACGGGGCTTTCCTTGGTTTTCTGGGATCCTCGCCCTGACAGTGG
CGATCGCCTTTTGGCAGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MGRSLDCYVENEITQDGTEYYFLMPVDQPVVILAWDEDEADESDLPETELVEDPEELAEIFPDAKAVLAEHDLILQDTAH
VMTVRGELPPLEEDKILSLEIEDDDFEDEELEAEELQELARFYHLDQLYSIYTPLEPIPIFVKVTEDEEMEILEPGDPMI
QSLVDTLLLQDAD

Sequences:

>Translated_173_residues
MGRSLDCYVENEITQDGTEYYFLMPVDQPVVILAWDEDEADESDLPETELVEDPEELAEIFPDAKAVLAEHDLILQDTAH
VMTVRGELPPLEEDKILSLEIEDDDFEDEELEAEELQELARFYHLDQLYSIYTPLEPIPIFVKVTEDEEMEILEPGDPMI
QSLVDTLLLQDAD
>Mature_172_residues
GRSLDCYVENEITQDGTEYYFLMPVDQPVVILAWDEDEADESDLPETELVEDPEELAEIFPDAKAVLAEHDLILQDTAHV
MTVRGELPPLEEDKILSLEIEDDDFEDEELEAEELQELARFYHLDQLYSIYTPLEPIPIFVKVTEDEEMEILEPGDPMIQ
SLVDTLLLQDAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19888; Mature: 19757

Theoretical pI: Translated: 3.36; Mature: 3.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRSLDCYVENEITQDGTEYYFLMPVDQPVVILAWDEDEADESDLPETELVEDPEELAEI
CCCCEEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHCCHHHHHHH
FPDAKAVLAEHDLILQDTAHVMTVRGELPPLEEDKILSLEIEDDDFEDEELEAEELQELA
CCCHHHHHHHCCEEEECCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHH
RFYHLDQLYSIYTPLEPIPIFVKVTEDEEMEILEPGDPMIQSLVDTLLLQDAD
HHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GRSLDCYVENEITQDGTEYYFLMPVDQPVVILAWDEDEADESDLPETELVEDPEELAEI
CCCEEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHCCHHHHHHH
FPDAKAVLAEHDLILQDTAHVMTVRGELPPLEEDKILSLEIEDDDFEDEELEAEELQELA
CCCHHHHHHHCCEEEECCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHH
RFYHLDQLYSIYTPLEPIPIFVKVTEDEEMEILEPGDPMIQSLVDTLLLQDAD
HHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA