| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is acnB [H]
Identifier: 170078290
GI number: 170078290
Start: 1766376
End: 1768982
Strand: Direct
Name: acnB [H]
Synonym: SYNPCC7002_A1683
Alternate gene names: 170078290
Gene position: 1766376-1768982 (Clockwise)
Preceding gene: 170078289
Following gene: 170078291
Centisome position: 58.72
GC content: 53.09
Gene sequence:
>2607_bases ATGCTAGAAGCCTACCGCAAACACGCCGCCGAACGCGCCCAATTGGGAATTCCCCCTTTACCGCTAACCGCAGAACAAAC CTCTGAACTCTGCGATCGCCTCAAAAATCCCCCCGAAGCAGAACAAGCAGAACTGCTGAGTTTATTGCGCGATCGCGTGC CTCCCGGTGTTGATGAAGCCGCCTATGTGAAAGCGGGTTTTTTAACCGGAATTGCCAAAAAAGAAATTACTTGTCCCCTG ATCAGTCCCCAGGGTGCAGTGGAACTCCTGGGAACTATGGTGGGTGGCTATAACGTCCAATCCCTCGTCGAACTCCTCAA ATCCCCCGACAGCAATATTGCCAGTGCCGCCGCCACTGCCCTGAGCAAAACTCTGTTGGTTTTCGATGCCTTTAACGATG TCCTCGAACTCTCTGATACCAACCCCTACGCCAAACAAGTGATCGATGCTTGGGCAGAAGCCGCTTGGTTTATCGGTAAG CCCAAAGTTCCCGAGGCGATCGCCGTTACTGTCTTTAAGGTTCCCGGCGAAACCAATACCGATGACCTTTCTCCCGCGCC CCACGCCACAACTCGCCCCGACATTCCCCTCCATGCCCTCGCAATGCTGGAATCAAAAATGCCAGAGGGGTTAGAAACTA TTGCCGAACTGAAGCAAAAAGGTCATCCCGTTGCCTATGTCGGTGATGTGGTCGGTACCGGTTCCTCTCGGAAATCAGCG ATCAACTCCGTACTATGGCACCTCGGCCACGACATTCCCTTTGTCCCCAACAAAAAAGCAGGCGGTTATATTCTCGGCGG TAAAATTGCCCCGATTTTCTTCAATACCGCTGAAGACTCCGGTGCACTGCCCATTGAGTGTGATGTCAGTAAGCTTAATA CGGGCGATGTGATCACCATTCATCCCTACGCAGGCAAAATTACTAACGAAGCGGGTGAAACAATCTCTACCTTTGAACTA AAGCCTGAAACGATCCTCGACGAAGTGCAAGCGGGTGGCCGAATTCCTTTGCTGATTGGCCGGGCACTCACCGACAAAAC CCGTGAAGCCCTCGGACTCGAACCGACGACGGTGTTTGTGCGTCCCTCCCTGCCAGAAGATACCCACAAAGGGTTTACCT TGGCACAAAAAATGGTGGGTAAAGCGTGCGGTTTAGAAGGGGTTCGTCCTGGGACATCCTGCGAGCCGATCATGACCACC GTGGGTTCCCAAGACACCACTGGCCCGATGACTCGCGATGAGCTAAAAGAGCTGGCTTGTCTCGGTTTCAATGCGGACTT GACCCTACAAACTTTCTGTCACACTGCCGCCTATCCGAAGCCAGTTGATGTCGTTACCCACAAACAACTGCCCGACTTCT TTGCGACCCGTGGCGGTGTTGCCCTCAAACCCGGTGATGGCATTATCCACTCGTGGCTGAACCGGATGTTATTGCCCGAT ACCGTGGGAACTGGTGGTGACTCCCATACCCGTTTCCCCTTGGGGATTTCTTTCCCGGCGGGTTCTGGTTTGGTGGCCTT TGCAGCGGCCCTCGGTGTCATGCCCCTTGATATGCCGGAATCTGTCCTCGTGAAATTTACGGGCGAACTGCAACCCGGTG TCACCCTCCGCGATATTGTCAATGCGATTCCCTGGGTGGCGATGCAACAGGGTAAATTGACCGTCGGCAAAGAGAACAAG GTTAACGTCTTTAACGGTCGGATCATGGAAATGGAAGGTCTGCCGGATCTCAAGGTAGAGCAAGCCTTTGAATTGACCGA TGCTACTGCCGAGCGTTCCTGTTCTGGTTCGACGATTAAACTCAGCGAAGAAACCGTGGCGGAATATCTGCGGTCTAATG TCGTGCTGATGAAGAACATGATTGCCCGTGGTTACTCCGATGCGCGTACCCTACTGCGTCGGATTGCGAAGATGGAGGAA TGGCTCGCGAATCCTTCTCTGATGTCGGCGGATCCTGATGCGGAATATGCGGATGTGATCGAGGTGAACCTGAATGAGAT TAAGGAACCCATCGTTGCGGCTCCGAACGATCCTGACAATGTCAAACTGATGTCTGAATGTGCAGGGGACAAAGTTGATG AGGTGTTCATCGGTTCCTGCATGACGAATATTGGTCACTACCGCGCAGCGGCGAAAATCCTGGAAGGGGCGGGTGTTGTC AAAGGTCGTCTCTGGATTTGTCCACCCACGCGCATGGATGAAAAGCAACTCCGGGATGAAGGGGTTTACGGTGTCTTCGC GGCGGCAGGAGCGCGGACGGAAATGCCCGGCTGTTCTCTTTGTATGGGGAACCAAGCCCGCGTTGAAGATAATGCAACAG TTTTCTCTACTTCGACCCGGAACTTCAATAACCGGATGGGCAAGGGGGCGCAAGTTTACCTTGGTTCGGCGGAGTTAGCA GCGGTTTGTGCGCTCCTCGGCAAGATTCCCACTGTGGAAGAATATCAGGCGATCGTCTCTGAGAAGATTGATCCGTTTAA GGGTGATCTATACCGTTATCTCAATTTCAATGAGATTGATGGCTTTGAGGATGAGGGTCGCGTGATTGCCCTTGAGGATA TGCCGAAGATCGAAGATCTCCTCGGTATGCCTGTAGGCGCGAAGTAA
Upstream 100 bases:
>100_bases TCTATGGACAATCCAAGACTGAGATTGTTCACCCATAGCGTCATTACAGCGGGCATTACAATAGAGTATCTAAAACGTTA GATAACCGATAGATCTCCCT
Downstream 100 bases:
>100_bases AAATATAGGAATCTGATTTTATAATTAAGGTGAATCATCATTGATTCACCTTTTATTAGCCTATAATTTAATTATCATTT TTATCCTAAGAAAGAAAAAT
Product: bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Products: NA
Alternate protein names: Aconitase 2; 2-methylisocitrate dehydratase; Citrate hydro-lyase 2 [H]
Number of amino acids: Translated: 868; Mature: 868
Protein sequence:
>868_residues MLEAYRKHAAERAQLGIPPLPLTAEQTSELCDRLKNPPEAEQAELLSLLRDRVPPGVDEAAYVKAGFLTGIAKKEITCPL ISPQGAVELLGTMVGGYNVQSLVELLKSPDSNIASAAATALSKTLLVFDAFNDVLELSDTNPYAKQVIDAWAEAAWFIGK PKVPEAIAVTVFKVPGETNTDDLSPAPHATTRPDIPLHALAMLESKMPEGLETIAELKQKGHPVAYVGDVVGTGSSRKSA INSVLWHLGHDIPFVPNKKAGGYILGGKIAPIFFNTAEDSGALPIECDVSKLNTGDVITIHPYAGKITNEAGETISTFEL KPETILDEVQAGGRIPLLIGRALTDKTREALGLEPTTVFVRPSLPEDTHKGFTLAQKMVGKACGLEGVRPGTSCEPIMTT VGSQDTTGPMTRDELKELACLGFNADLTLQTFCHTAAYPKPVDVVTHKQLPDFFATRGGVALKPGDGIIHSWLNRMLLPD TVGTGGDSHTRFPLGISFPAGSGLVAFAAALGVMPLDMPESVLVKFTGELQPGVTLRDIVNAIPWVAMQQGKLTVGKENK VNVFNGRIMEMEGLPDLKVEQAFELTDATAERSCSGSTIKLSEETVAEYLRSNVVLMKNMIARGYSDARTLLRRIAKMEE WLANPSLMSADPDAEYADVIEVNLNEIKEPIVAAPNDPDNVKLMSECAGDKVDEVFIGSCMTNIGHYRAAAKILEGAGVV KGRLWICPPTRMDEKQLRDEGVYGVFAAAGARTEMPGCSLCMGNQARVEDNATVFSTSTRNFNNRMGKGAQVYLGSAELA AVCALLGKIPTVEEYQAIVSEKIDPFKGDLYRYLNFNEIDGFEDEGRVIALEDMPKIEDLLGMPVGAK
Sequences:
>Translated_868_residues MLEAYRKHAAERAQLGIPPLPLTAEQTSELCDRLKNPPEAEQAELLSLLRDRVPPGVDEAAYVKAGFLTGIAKKEITCPL ISPQGAVELLGTMVGGYNVQSLVELLKSPDSNIASAAATALSKTLLVFDAFNDVLELSDTNPYAKQVIDAWAEAAWFIGK PKVPEAIAVTVFKVPGETNTDDLSPAPHATTRPDIPLHALAMLESKMPEGLETIAELKQKGHPVAYVGDVVGTGSSRKSA INSVLWHLGHDIPFVPNKKAGGYILGGKIAPIFFNTAEDSGALPIECDVSKLNTGDVITIHPYAGKITNEAGETISTFEL KPETILDEVQAGGRIPLLIGRALTDKTREALGLEPTTVFVRPSLPEDTHKGFTLAQKMVGKACGLEGVRPGTSCEPIMTT VGSQDTTGPMTRDELKELACLGFNADLTLQTFCHTAAYPKPVDVVTHKQLPDFFATRGGVALKPGDGIIHSWLNRMLLPD TVGTGGDSHTRFPLGISFPAGSGLVAFAAALGVMPLDMPESVLVKFTGELQPGVTLRDIVNAIPWVAMQQGKLTVGKENK VNVFNGRIMEMEGLPDLKVEQAFELTDATAERSCSGSTIKLSEETVAEYLRSNVVLMKNMIARGYSDARTLLRRIAKMEE WLANPSLMSADPDAEYADVIEVNLNEIKEPIVAAPNDPDNVKLMSECAGDKVDEVFIGSCMTNIGHYRAAAKILEGAGVV KGRLWICPPTRMDEKQLRDEGVYGVFAAAGARTEMPGCSLCMGNQARVEDNATVFSTSTRNFNNRMGKGAQVYLGSAELA AVCALLGKIPTVEEYQAIVSEKIDPFKGDLYRYLNFNEIDGFEDEGRVIALEDMPKIEDLLGMPVGAK >Mature_868_residues MLEAYRKHAAERAQLGIPPLPLTAEQTSELCDRLKNPPEAEQAELLSLLRDRVPPGVDEAAYVKAGFLTGIAKKEITCPL ISPQGAVELLGTMVGGYNVQSLVELLKSPDSNIASAAATALSKTLLVFDAFNDVLELSDTNPYAKQVIDAWAEAAWFIGK PKVPEAIAVTVFKVPGETNTDDLSPAPHATTRPDIPLHALAMLESKMPEGLETIAELKQKGHPVAYVGDVVGTGSSRKSA INSVLWHLGHDIPFVPNKKAGGYILGGKIAPIFFNTAEDSGALPIECDVSKLNTGDVITIHPYAGKITNEAGETISTFEL KPETILDEVQAGGRIPLLIGRALTDKTREALGLEPTTVFVRPSLPEDTHKGFTLAQKMVGKACGLEGVRPGTSCEPIMTT VGSQDTTGPMTRDELKELACLGFNADLTLQTFCHTAAYPKPVDVVTHKQLPDFFATRGGVALKPGDGIIHSWLNRMLLPD TVGTGGDSHTRFPLGISFPAGSGLVAFAAALGVMPLDMPESVLVKFTGELQPGVTLRDIVNAIPWVAMQQGKLTVGKENK VNVFNGRIMEMEGLPDLKVEQAFELTDATAERSCSGSTIKLSEETVAEYLRSNVVLMKNMIARGYSDARTLLRRIAKMEE WLANPSLMSADPDAEYADVIEVNLNEIKEPIVAAPNDPDNVKLMSECAGDKVDEVFIGSCMTNIGHYRAAAKILEGAGVV KGRLWICPPTRMDEKQLRDEGVYGVFAAAGARTEMPGCSLCMGNQARVEDNATVFSTSTRNFNNRMGKGAQVYLGSAELA AVCALLGKIPTVEEYQAIVSEKIDPFKGDLYRYLNFNEIDGFEDEGRVIALEDMPKIEDLLGMPVGAK
Specific function: Catalyzes the isomerization of citrate to isocitrate via cis-aconitate as well as the dehydration of 2-methylisocitrate to cis-2-methylaconitate [H]
COG id: COG1049
COG function: function code C; Aconitase B
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aconitase/IPM isomerase family [H]
Homologues:
Organism=Escherichia coli, GI2367097, Length=859, Percent_Identity=65.6577415599534, Blast_Score=1108, Evalue=0.0, Organism=Escherichia coli, GI1786259, Length=368, Percent_Identity=27.1739130434783, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6323335, Length=401, Percent_Identity=25.6857855361596, Blast_Score=69, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6321429, Length=369, Percent_Identity=24.390243902439, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015931 - InterPro: IPR015937 - InterPro: IPR001030 - InterPro: IPR015928 - InterPro: IPR018136 - InterPro: IPR004406 - InterPro: IPR015930 - InterPro: IPR015933 - InterPro: IPR015929 [H]
Pfam domain/function: PF00330 Aconitase; PF06434 Aconitase_2_N; PF11791 Aconitase_B_N [H]
EC number: =4.2.1.3; =4.2.1.99 [H]
Molecular weight: Translated: 93358; Mature: 93358
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS00450 ACONITASE_1 ; PS01244 ACONITASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEAYRKHAAERAQLGIPPLPLTAEQTSELCDRLKNPPEAEQAELLSLLRDRVPPGVDEA CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCH AYVKAGFLTGIAKKEITCPLISPQGAVELLGTMVGGYNVQSLVELLKSPDSNIASAAATA HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHH LSKTLLVFDAFNDVLELSDTNPYAKQVIDAWAEAAWFIGKPKVPEAIAVTVFKVPGETNT HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEECCCCCCCCEEEEEEEECCCCCCC DDLSPAPHATTRPDIPLHALAMLESKMPEGLETIAELKQKGHPVAYVGDVVGTGSSRKSA CCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHH INSVLWHLGHDIPFVPNKKAGGYILGGKIAPIFFNTAEDSGALPIECDVSKLNTGDVITI HHHHHHHHCCCCCCCCCCCCCCEEECCEEEEEEEECCCCCCCCEEEECCCCCCCCCEEEE HPYAGKITNEAGETISTFELKPETILDEVQAGGRIPLLIGRALTDKTREALGLEPTTVFV CCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHCCCCEEEEE RPSLPEDTHKGFTLAQKMVGKACGLEGVRPGTSCEPIMTTVGSQDTTGPMTRDELKELAC ECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHH LGFNADLTLQTFCHTAAYPKPVDVVTHKQLPDFFATRGGVALKPGDGIIHSWLNRMLLPD HCCCCCCHHHHHHHHCCCCCCCHHHHHHCCCHHHHCCCCEEECCCCCHHHHHHHHHCCCC TVGTGGDSHTRFPLGISFPAGSGLVAFAAALGVMPLDMPESVLVKFTGELQPGVTLRDIV CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHEEEECCCCCCCCHHHHH NAIPWVAMQQGKLTVGKENKVNVFNGRIMEMEGLPDLKVEQAFELTDATAERSCSGSTIK HHHCCCEEECCCEEECCCCCEEEECCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEE LSEETVAEYLRSNVVLMKNMIARGYSDARTLLRRIAKMEEWLANPSLMSADPDAEYADVI ECHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEE EVNLNEIKEPIVAAPNDPDNVKLMSECAGDKVDEVFIGSCMTNIGHYRAAAKILEGAGVV EECHHHHCCCEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEE KGRLWICPPTRMDEKQLRDEGVYGVFAAAGARTEMPGCSLCMGNQARVEDNATVFSTSTR ECEEEECCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCEECCCCCEECCCCEEEEECCC NFNNRMGKGAQVYLGSAELAAVCALLGKIPTVEEYQAIVSEKIDPFKGDLYRYLNFNEID CHHHHCCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCC GFEDEGRVIALEDMPKIEDLLGMPVGAK CCCCCCCEEEECCCCHHHHHHCCCCCCC >Mature Secondary Structure MLEAYRKHAAERAQLGIPPLPLTAEQTSELCDRLKNPPEAEQAELLSLLRDRVPPGVDEA CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCH AYVKAGFLTGIAKKEITCPLISPQGAVELLGTMVGGYNVQSLVELLKSPDSNIASAAATA HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHH LSKTLLVFDAFNDVLELSDTNPYAKQVIDAWAEAAWFIGKPKVPEAIAVTVFKVPGETNT HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEECCCCCCCCEEEEEEEECCCCCCC DDLSPAPHATTRPDIPLHALAMLESKMPEGLETIAELKQKGHPVAYVGDVVGTGSSRKSA CCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHH INSVLWHLGHDIPFVPNKKAGGYILGGKIAPIFFNTAEDSGALPIECDVSKLNTGDVITI HHHHHHHHCCCCCCCCCCCCCCEEECCEEEEEEEECCCCCCCCEEEECCCCCCCCCEEEE HPYAGKITNEAGETISTFELKPETILDEVQAGGRIPLLIGRALTDKTREALGLEPTTVFV CCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHCCCCEEEEE RPSLPEDTHKGFTLAQKMVGKACGLEGVRPGTSCEPIMTTVGSQDTTGPMTRDELKELAC ECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHH LGFNADLTLQTFCHTAAYPKPVDVVTHKQLPDFFATRGGVALKPGDGIIHSWLNRMLLPD HCCCCCCHHHHHHHHCCCCCCCHHHHHHCCCHHHHCCCCEEECCCCCHHHHHHHHHCCCC TVGTGGDSHTRFPLGISFPAGSGLVAFAAALGVMPLDMPESVLVKFTGELQPGVTLRDIV CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHEEEECCCCCCCCHHHHH NAIPWVAMQQGKLTVGKENKVNVFNGRIMEMEGLPDLKVEQAFELTDATAERSCSGSTIK HHHCCCEEECCCEEECCCCCEEEECCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEE LSEETVAEYLRSNVVLMKNMIARGYSDARTLLRRIAKMEEWLANPSLMSADPDAEYADVI ECHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEE EVNLNEIKEPIVAAPNDPDNVKLMSECAGDKVDEVFIGSCMTNIGHYRAAAKILEGAGVV EECHHHHCCCEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEE KGRLWICPPTRMDEKQLRDEGVYGVFAAAGARTEMPGCSLCMGNQARVEDNATVFSTSTR ECEEEECCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCEECCCCCEECCCCEEEEECCC NFNNRMGKGAQVYLGSAELAAVCALLGKIPTVEEYQAIVSEKIDPFKGDLYRYLNFNEID CHHHHCCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCC GFEDEGRVIALEDMPKIEDLLGMPVGAK CCCCCCCEEEECCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]