| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is 170078291
Identifier: 170078291
GI number: 170078291
Start: 1769090
End: 1770808
Strand: Direct
Name: 170078291
Synonym: SYNPCC7002_A1684
Alternate gene names: NA
Gene position: 1769090-1770808 (Clockwise)
Preceding gene: 170078290
Following gene: 170078292
Centisome position: 58.81
GC content: 31.47
Gene sequence:
>1719_bases ATGCAAACAGATATCAACATAGACTATTCAAGCCTTGTTACACATATCAAGCCATACATAATAAAAGGAAGAACAGAGTC TACTGCATTTCTTTATTGGTTTCTAATAAATATTTATAGGCTTGAAGAAATGGATGTTCAAAATATAGTTTGCGATGGTA GTGGAGACAAAGGAATTGATGGAATATATATAAATCACAACGAAGAAATTATTGATATATTTCAAGCTAAAATAGTCAAA ACTCCAACAAAAACTCTTGGGGATTCACAACTTAAAGAATTCATCGGTAGTCTTCGTCAAGTCAAGAATGATATTGACCT AGAGAAATTCATAAAAAATACACATAATGTACAGCTTAAAGGGTTGTTAGAAAACAACAAAGAATATTTTTTATCACCAG ACTTTACTGTGCGTGGAGTTTTCATTACAAATATCAATAAAGATCATAATGCAAAGCTTCTATTAGATACATTCTCTAAC AGTGATTTATCTTTGGTCGTATGGGACAAAGATTTGATTGTTGAAAATTATACTTCCAGTGAAAAAGCAATACCAAAGAC ACAACAATTATCTTTTGATGTTTATGGATTTGATCATGCAGAATTTTATGTAAAAAACTCAGTAAAGATTGTAATTGCCC CTCTTTCGGCTATAGATTTGGTAAAGATGGAAGGGATTGAAAATCAGCAAATTTTCGAATTGAATTTAAGAAAATCATTG GGTAGCAATAAAACAAAAGTCAACAAAGATATAAGCAATAGTATTAAAGATTCTTCTGAGCATATCAATTTTCTGCTCTA TCATAATGGCATCACAATTATTTGTGAAAGTGTTGACACATCCGAAAAAGATAAAATAAAAATCAAAAACTATTCGATTG TTAATGGGTGTCAAAGTGTTTCATGCCTTTATAAAAACAAAGAAAGTATTACAGAGGACTTGCGGATTTTAGCTCGTCTT ATTCAAGTTCCTTCTGAGTCTGATTTGATATCAAAAATCACTTACAATAGTAATAATCAAAATGGTATTAGAGCAAGAGA TTTCCGCTCAAACACACCTACTCAAGTACGTTTGCAGCAAGAAATCAATACAAATTTTTCTGACTTTGTATATCAAATCA AGACAGGAGAAACAAAAAAAGCTCAAGTCGATGATAATCAAAAAATTATTGATAACACTCTTGCTGGACAGCTAATGCTT GCTTTCGATCTCAAGCTGCCCTCCAGAGTTCAAAGACCAGGGCGTATTTTTGATGATTGGCATCAAGAAATCTTCTCACG ACCAGAAGTAAATGGTGCAAGAATTGTCGCTTTATTTAAAATATTTAACATTGTCAGTAATAGTTTAAGTCAAGTTAACC CATCTATATTTGCTGGATATCAAATAACAAAATTCTTTTTGCTCTACTTGCTGCGTCAAGTTCTTGAACTTGATGAAGAA GGAAAGGAATTTTGTAAACATCCAGAGGATTTTTTCTCGTCCAGCACTCAAGAGAGAAAAATGGAGTTTGCAATTAGCCG AATAATTAGCGATTTAATTATTGATTTAAATGCAGAATTTGAAGAACGTGGAGGTCAAGATTATGATTTTAAATCTGTAT TTAAAAAGACGGATAAGATAAATGACCTATCCAAATCTATATTGTCATCATATAAAAAAATGCTTTCGCGAAAGCGGATA GAAACTTTTTCTGAGTTGATTGAAAATAGTAGTCAATAG
Upstream 100 bases:
>100_bases GGAATCTGATTTTATAATTAAGGTGAATCATCATTGATTCACCTTTTATTAGCCTATAATTTAATTATCATTTTTATCCT AAGAAAGAAAAATATCAGAA
Downstream 100 bases:
>100_bases ATTTAAGGTTTAATAGTAGGAATGAGTCAACTTACAGTGGACATACCAGACGATATAATGCAAAAGTTAGAAGAGCAAGA TCAACCTCTTCAAAGTCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 572; Mature: 572
Protein sequence:
>572_residues MQTDINIDYSSLVTHIKPYIIKGRTESTAFLYWFLINIYRLEEMDVQNIVCDGSGDKGIDGIYINHNEEIIDIFQAKIVK TPTKTLGDSQLKEFIGSLRQVKNDIDLEKFIKNTHNVQLKGLLENNKEYFLSPDFTVRGVFITNINKDHNAKLLLDTFSN SDLSLVVWDKDLIVENYTSSEKAIPKTQQLSFDVYGFDHAEFYVKNSVKIVIAPLSAIDLVKMEGIENQQIFELNLRKSL GSNKTKVNKDISNSIKDSSEHINFLLYHNGITIICESVDTSEKDKIKIKNYSIVNGCQSVSCLYKNKESITEDLRILARL IQVPSESDLISKITYNSNNQNGIRARDFRSNTPTQVRLQQEINTNFSDFVYQIKTGETKKAQVDDNQKIIDNTLAGQLML AFDLKLPSRVQRPGRIFDDWHQEIFSRPEVNGARIVALFKIFNIVSNSLSQVNPSIFAGYQITKFFLLYLLRQVLELDEE GKEFCKHPEDFFSSSTQERKMEFAISRIISDLIIDLNAEFEERGGQDYDFKSVFKKTDKINDLSKSILSSYKKMLSRKRI ETFSELIENSSQ
Sequences:
>Translated_572_residues MQTDINIDYSSLVTHIKPYIIKGRTESTAFLYWFLINIYRLEEMDVQNIVCDGSGDKGIDGIYINHNEEIIDIFQAKIVK TPTKTLGDSQLKEFIGSLRQVKNDIDLEKFIKNTHNVQLKGLLENNKEYFLSPDFTVRGVFITNINKDHNAKLLLDTFSN SDLSLVVWDKDLIVENYTSSEKAIPKTQQLSFDVYGFDHAEFYVKNSVKIVIAPLSAIDLVKMEGIENQQIFELNLRKSL GSNKTKVNKDISNSIKDSSEHINFLLYHNGITIICESVDTSEKDKIKIKNYSIVNGCQSVSCLYKNKESITEDLRILARL IQVPSESDLISKITYNSNNQNGIRARDFRSNTPTQVRLQQEINTNFSDFVYQIKTGETKKAQVDDNQKIIDNTLAGQLML AFDLKLPSRVQRPGRIFDDWHQEIFSRPEVNGARIVALFKIFNIVSNSLSQVNPSIFAGYQITKFFLLYLLRQVLELDEE GKEFCKHPEDFFSSSTQERKMEFAISRIISDLIIDLNAEFEERGGQDYDFKSVFKKTDKINDLSKSILSSYKKMLSRKRI ETFSELIENSSQ >Mature_572_residues MQTDINIDYSSLVTHIKPYIIKGRTESTAFLYWFLINIYRLEEMDVQNIVCDGSGDKGIDGIYINHNEEIIDIFQAKIVK TPTKTLGDSQLKEFIGSLRQVKNDIDLEKFIKNTHNVQLKGLLENNKEYFLSPDFTVRGVFITNINKDHNAKLLLDTFSN SDLSLVVWDKDLIVENYTSSEKAIPKTQQLSFDVYGFDHAEFYVKNSVKIVIAPLSAIDLVKMEGIENQQIFELNLRKSL GSNKTKVNKDISNSIKDSSEHINFLLYHNGITIICESVDTSEKDKIKIKNYSIVNGCQSVSCLYKNKESITEDLRILARL IQVPSESDLISKITYNSNNQNGIRARDFRSNTPTQVRLQQEINTNFSDFVYQIKTGETKKAQVDDNQKIIDNTLAGQLML AFDLKLPSRVQRPGRIFDDWHQEIFSRPEVNGARIVALFKIFNIVSNSLSQVNPSIFAGYQITKFFLLYLLRQVLELDEE GKEFCKHPEDFFSSSTQERKMEFAISRIISDLIIDLNAEFEERGGQDYDFKSVFKKTDKINDLSKSILSSYKKMLSRKRI ETFSELIENSSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65751; Mature: 65751
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTDINIDYSSLVTHIKPYIIKGRTESTAFLYWFLINIYRLEEMDVQNIVCDGSGDKGID CCCCCCCCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC GIYINHNEEIIDIFQAKIVKTPTKTLGDSQLKEFIGSLRQVKNDIDLEKFIKNTHNVQLK EEEECCCCHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEE GLLENNKEYFLSPDFTVRGVFITNINKDHNAKLLLDTFSNSDLSLVVWDKDLIVENYTSS EEEECCCEEEECCCCEEEEEEEEECCCCCCCEEEEEECCCCCEEEEEECCHHEEECCCCC EKAIPKTQQLSFDVYGFDHAEFYVKNSVKIVIAPLSAIDLVKMEGIENQQIFELNLRKSL CCCCCCHHHCEEEEECCCCEEEEEECCEEEEEECCCHHHHHHHCCCCCCEEEEEEEHHHC GSNKTKVNKDISNSIKDSSEHINFLLYHNGITIICESVDTSEKDKIKIKNYSIVNGCQSV CCCCCCCCHHHHHHHCCCCHHEEEEEEECCEEEEEECCCCCCCCCEEEECEEHHHHHHHH SCLYKNKESITEDLRILARLIQVPSESDLISKITYNSNNQNGIRARDFRSNTPTQVRLQQ HHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCCCCCEECCCCCCCCCEEEEHH EINTNFSDFVYQIKTGETKKAQVDDNQKIIDNTLAGQLMLAFDLKLPSRVQRPGRIFDDW HHCCCHHHEEEEEECCCCCCCCCCCCHHHHHHHHHCEEEEEEECCCCHHHCCCCCHHHHH HQEIFSRPEVNGARIVALFKIFNIVSNSLSQVNPSIFAGYQITKFFLLYLLRQVLELDEE HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHEECHHHHHHHHHHHHHHHHHHCHH GKEFCKHPEDFFSSSTQERKMEFAISRIISDLIIDLNAEFEERGGQDYDFKSVFKKTDKI HHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHH NDLSKSILSSYKKMLSRKRIETFSELIENSSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQTDINIDYSSLVTHIKPYIIKGRTESTAFLYWFLINIYRLEEMDVQNIVCDGSGDKGID CCCCCCCCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC GIYINHNEEIIDIFQAKIVKTPTKTLGDSQLKEFIGSLRQVKNDIDLEKFIKNTHNVQLK EEEECCCCHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEE GLLENNKEYFLSPDFTVRGVFITNINKDHNAKLLLDTFSNSDLSLVVWDKDLIVENYTSS EEEECCCEEEECCCCEEEEEEEEECCCCCCCEEEEEECCCCCEEEEEECCHHEEECCCCC EKAIPKTQQLSFDVYGFDHAEFYVKNSVKIVIAPLSAIDLVKMEGIENQQIFELNLRKSL CCCCCCHHHCEEEEECCCCEEEEEECCEEEEEECCCHHHHHHHCCCCCCEEEEEEEHHHC GSNKTKVNKDISNSIKDSSEHINFLLYHNGITIICESVDTSEKDKIKIKNYSIVNGCQSV CCCCCCCCHHHHHHHCCCCHHEEEEEEECCEEEEEECCCCCCCCCEEEECEEHHHHHHHH SCLYKNKESITEDLRILARLIQVPSESDLISKITYNSNNQNGIRARDFRSNTPTQVRLQQ HHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCCCCCEECCCCCCCCCEEEEHH EINTNFSDFVYQIKTGETKKAQVDDNQKIIDNTLAGQLMLAFDLKLPSRVQRPGRIFDDW HHCCCHHHEEEEEECCCCCCCCCCCCHHHHHHHHHCEEEEEEECCCCHHHCCCCCHHHHH HQEIFSRPEVNGARIVALFKIFNIVSNSLSQVNPSIFAGYQITKFFLLYLLRQVLELDEE HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHEECHHHHHHHHHHHHHHHHHHCHH GKEFCKHPEDFFSSSTQERKMEFAISRIISDLIIDLNAEFEERGGQDYDFKSVFKKTDKI HHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHH NDLSKSILSSYKKMLSRKRIETFSELIENSSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA