Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078291

Identifier: 170078291

GI number: 170078291

Start: 1769090

End: 1770808

Strand: Direct

Name: 170078291

Synonym: SYNPCC7002_A1684

Alternate gene names: NA

Gene position: 1769090-1770808 (Clockwise)

Preceding gene: 170078290

Following gene: 170078292

Centisome position: 58.81

GC content: 31.47

Gene sequence:

>1719_bases
ATGCAAACAGATATCAACATAGACTATTCAAGCCTTGTTACACATATCAAGCCATACATAATAAAAGGAAGAACAGAGTC
TACTGCATTTCTTTATTGGTTTCTAATAAATATTTATAGGCTTGAAGAAATGGATGTTCAAAATATAGTTTGCGATGGTA
GTGGAGACAAAGGAATTGATGGAATATATATAAATCACAACGAAGAAATTATTGATATATTTCAAGCTAAAATAGTCAAA
ACTCCAACAAAAACTCTTGGGGATTCACAACTTAAAGAATTCATCGGTAGTCTTCGTCAAGTCAAGAATGATATTGACCT
AGAGAAATTCATAAAAAATACACATAATGTACAGCTTAAAGGGTTGTTAGAAAACAACAAAGAATATTTTTTATCACCAG
ACTTTACTGTGCGTGGAGTTTTCATTACAAATATCAATAAAGATCATAATGCAAAGCTTCTATTAGATACATTCTCTAAC
AGTGATTTATCTTTGGTCGTATGGGACAAAGATTTGATTGTTGAAAATTATACTTCCAGTGAAAAAGCAATACCAAAGAC
ACAACAATTATCTTTTGATGTTTATGGATTTGATCATGCAGAATTTTATGTAAAAAACTCAGTAAAGATTGTAATTGCCC
CTCTTTCGGCTATAGATTTGGTAAAGATGGAAGGGATTGAAAATCAGCAAATTTTCGAATTGAATTTAAGAAAATCATTG
GGTAGCAATAAAACAAAAGTCAACAAAGATATAAGCAATAGTATTAAAGATTCTTCTGAGCATATCAATTTTCTGCTCTA
TCATAATGGCATCACAATTATTTGTGAAAGTGTTGACACATCCGAAAAAGATAAAATAAAAATCAAAAACTATTCGATTG
TTAATGGGTGTCAAAGTGTTTCATGCCTTTATAAAAACAAAGAAAGTATTACAGAGGACTTGCGGATTTTAGCTCGTCTT
ATTCAAGTTCCTTCTGAGTCTGATTTGATATCAAAAATCACTTACAATAGTAATAATCAAAATGGTATTAGAGCAAGAGA
TTTCCGCTCAAACACACCTACTCAAGTACGTTTGCAGCAAGAAATCAATACAAATTTTTCTGACTTTGTATATCAAATCA
AGACAGGAGAAACAAAAAAAGCTCAAGTCGATGATAATCAAAAAATTATTGATAACACTCTTGCTGGACAGCTAATGCTT
GCTTTCGATCTCAAGCTGCCCTCCAGAGTTCAAAGACCAGGGCGTATTTTTGATGATTGGCATCAAGAAATCTTCTCACG
ACCAGAAGTAAATGGTGCAAGAATTGTCGCTTTATTTAAAATATTTAACATTGTCAGTAATAGTTTAAGTCAAGTTAACC
CATCTATATTTGCTGGATATCAAATAACAAAATTCTTTTTGCTCTACTTGCTGCGTCAAGTTCTTGAACTTGATGAAGAA
GGAAAGGAATTTTGTAAACATCCAGAGGATTTTTTCTCGTCCAGCACTCAAGAGAGAAAAATGGAGTTTGCAATTAGCCG
AATAATTAGCGATTTAATTATTGATTTAAATGCAGAATTTGAAGAACGTGGAGGTCAAGATTATGATTTTAAATCTGTAT
TTAAAAAGACGGATAAGATAAATGACCTATCCAAATCTATATTGTCATCATATAAAAAAATGCTTTCGCGAAAGCGGATA
GAAACTTTTTCTGAGTTGATTGAAAATAGTAGTCAATAG

Upstream 100 bases:

>100_bases
GGAATCTGATTTTATAATTAAGGTGAATCATCATTGATTCACCTTTTATTAGCCTATAATTTAATTATCATTTTTATCCT
AAGAAAGAAAAATATCAGAA

Downstream 100 bases:

>100_bases
ATTTAAGGTTTAATAGTAGGAATGAGTCAACTTACAGTGGACATACCAGACGATATAATGCAAAAGTTAGAAGAGCAAGA
TCAACCTCTTCAAAGTCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 572; Mature: 572

Protein sequence:

>572_residues
MQTDINIDYSSLVTHIKPYIIKGRTESTAFLYWFLINIYRLEEMDVQNIVCDGSGDKGIDGIYINHNEEIIDIFQAKIVK
TPTKTLGDSQLKEFIGSLRQVKNDIDLEKFIKNTHNVQLKGLLENNKEYFLSPDFTVRGVFITNINKDHNAKLLLDTFSN
SDLSLVVWDKDLIVENYTSSEKAIPKTQQLSFDVYGFDHAEFYVKNSVKIVIAPLSAIDLVKMEGIENQQIFELNLRKSL
GSNKTKVNKDISNSIKDSSEHINFLLYHNGITIICESVDTSEKDKIKIKNYSIVNGCQSVSCLYKNKESITEDLRILARL
IQVPSESDLISKITYNSNNQNGIRARDFRSNTPTQVRLQQEINTNFSDFVYQIKTGETKKAQVDDNQKIIDNTLAGQLML
AFDLKLPSRVQRPGRIFDDWHQEIFSRPEVNGARIVALFKIFNIVSNSLSQVNPSIFAGYQITKFFLLYLLRQVLELDEE
GKEFCKHPEDFFSSSTQERKMEFAISRIISDLIIDLNAEFEERGGQDYDFKSVFKKTDKINDLSKSILSSYKKMLSRKRI
ETFSELIENSSQ

Sequences:

>Translated_572_residues
MQTDINIDYSSLVTHIKPYIIKGRTESTAFLYWFLINIYRLEEMDVQNIVCDGSGDKGIDGIYINHNEEIIDIFQAKIVK
TPTKTLGDSQLKEFIGSLRQVKNDIDLEKFIKNTHNVQLKGLLENNKEYFLSPDFTVRGVFITNINKDHNAKLLLDTFSN
SDLSLVVWDKDLIVENYTSSEKAIPKTQQLSFDVYGFDHAEFYVKNSVKIVIAPLSAIDLVKMEGIENQQIFELNLRKSL
GSNKTKVNKDISNSIKDSSEHINFLLYHNGITIICESVDTSEKDKIKIKNYSIVNGCQSVSCLYKNKESITEDLRILARL
IQVPSESDLISKITYNSNNQNGIRARDFRSNTPTQVRLQQEINTNFSDFVYQIKTGETKKAQVDDNQKIIDNTLAGQLML
AFDLKLPSRVQRPGRIFDDWHQEIFSRPEVNGARIVALFKIFNIVSNSLSQVNPSIFAGYQITKFFLLYLLRQVLELDEE
GKEFCKHPEDFFSSSTQERKMEFAISRIISDLIIDLNAEFEERGGQDYDFKSVFKKTDKINDLSKSILSSYKKMLSRKRI
ETFSELIENSSQ
>Mature_572_residues
MQTDINIDYSSLVTHIKPYIIKGRTESTAFLYWFLINIYRLEEMDVQNIVCDGSGDKGIDGIYINHNEEIIDIFQAKIVK
TPTKTLGDSQLKEFIGSLRQVKNDIDLEKFIKNTHNVQLKGLLENNKEYFLSPDFTVRGVFITNINKDHNAKLLLDTFSN
SDLSLVVWDKDLIVENYTSSEKAIPKTQQLSFDVYGFDHAEFYVKNSVKIVIAPLSAIDLVKMEGIENQQIFELNLRKSL
GSNKTKVNKDISNSIKDSSEHINFLLYHNGITIICESVDTSEKDKIKIKNYSIVNGCQSVSCLYKNKESITEDLRILARL
IQVPSESDLISKITYNSNNQNGIRARDFRSNTPTQVRLQQEINTNFSDFVYQIKTGETKKAQVDDNQKIIDNTLAGQLML
AFDLKLPSRVQRPGRIFDDWHQEIFSRPEVNGARIVALFKIFNIVSNSLSQVNPSIFAGYQITKFFLLYLLRQVLELDEE
GKEFCKHPEDFFSSSTQERKMEFAISRIISDLIIDLNAEFEERGGQDYDFKSVFKKTDKINDLSKSILSSYKKMLSRKRI
ETFSELIENSSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65751; Mature: 65751

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTDINIDYSSLVTHIKPYIIKGRTESTAFLYWFLINIYRLEEMDVQNIVCDGSGDKGID
CCCCCCCCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
GIYINHNEEIIDIFQAKIVKTPTKTLGDSQLKEFIGSLRQVKNDIDLEKFIKNTHNVQLK
EEEECCCCHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEE
GLLENNKEYFLSPDFTVRGVFITNINKDHNAKLLLDTFSNSDLSLVVWDKDLIVENYTSS
EEEECCCEEEECCCCEEEEEEEEECCCCCCCEEEEEECCCCCEEEEEECCHHEEECCCCC
EKAIPKTQQLSFDVYGFDHAEFYVKNSVKIVIAPLSAIDLVKMEGIENQQIFELNLRKSL
CCCCCCHHHCEEEEECCCCEEEEEECCEEEEEECCCHHHHHHHCCCCCCEEEEEEEHHHC
GSNKTKVNKDISNSIKDSSEHINFLLYHNGITIICESVDTSEKDKIKIKNYSIVNGCQSV
CCCCCCCCHHHHHHHCCCCHHEEEEEEECCEEEEEECCCCCCCCCEEEECEEHHHHHHHH
SCLYKNKESITEDLRILARLIQVPSESDLISKITYNSNNQNGIRARDFRSNTPTQVRLQQ
HHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCCCCCEECCCCCCCCCEEEEHH
EINTNFSDFVYQIKTGETKKAQVDDNQKIIDNTLAGQLMLAFDLKLPSRVQRPGRIFDDW
HHCCCHHHEEEEEECCCCCCCCCCCCHHHHHHHHHCEEEEEEECCCCHHHCCCCCHHHHH
HQEIFSRPEVNGARIVALFKIFNIVSNSLSQVNPSIFAGYQITKFFLLYLLRQVLELDEE
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHEECHHHHHHHHHHHHHHHHHHCHH
GKEFCKHPEDFFSSSTQERKMEFAISRIISDLIIDLNAEFEERGGQDYDFKSVFKKTDKI
HHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHH
NDLSKSILSSYKKMLSRKRIETFSELIENSSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQTDINIDYSSLVTHIKPYIIKGRTESTAFLYWFLINIYRLEEMDVQNIVCDGSGDKGID
CCCCCCCCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
GIYINHNEEIIDIFQAKIVKTPTKTLGDSQLKEFIGSLRQVKNDIDLEKFIKNTHNVQLK
EEEECCCCHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEE
GLLENNKEYFLSPDFTVRGVFITNINKDHNAKLLLDTFSNSDLSLVVWDKDLIVENYTSS
EEEECCCEEEECCCCEEEEEEEEECCCCCCCEEEEEECCCCCEEEEEECCHHEEECCCCC
EKAIPKTQQLSFDVYGFDHAEFYVKNSVKIVIAPLSAIDLVKMEGIENQQIFELNLRKSL
CCCCCCHHHCEEEEECCCCEEEEEECCEEEEEECCCHHHHHHHCCCCCCEEEEEEEHHHC
GSNKTKVNKDISNSIKDSSEHINFLLYHNGITIICESVDTSEKDKIKIKNYSIVNGCQSV
CCCCCCCCHHHHHHHCCCCHHEEEEEEECCEEEEEECCCCCCCCCEEEECEEHHHHHHHH
SCLYKNKESITEDLRILARLIQVPSESDLISKITYNSNNQNGIRARDFRSNTPTQVRLQQ
HHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCCCCCEECCCCCCCCCEEEEHH
EINTNFSDFVYQIKTGETKKAQVDDNQKIIDNTLAGQLMLAFDLKLPSRVQRPGRIFDDW
HHCCCHHHEEEEEECCCCCCCCCCCCHHHHHHHHHCEEEEEEECCCCHHHCCCCCHHHHH
HQEIFSRPEVNGARIVALFKIFNIVSNSLSQVNPSIFAGYQITKFFLLYLLRQVLELDEE
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHEECHHHHHHHHHHHHHHHHHHCHH
GKEFCKHPEDFFSSSTQERKMEFAISRIISDLIIDLNAEFEERGGQDYDFKSVFKKTDKI
HHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHH
NDLSKSILSSYKKMLSRKRIETFSELIENSSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA