Click here to switch to the map view.

The map label for this gene is 170078278

Identifier: 170078278

GI number: 170078278

Start: 1752514

End: 1753677

Strand: Direct

Name: 170078278

Synonym: SYNPCC7002_A1671

Alternate gene names: NA

Gene position: 1752514-1753677 (Clockwise)

Preceding gene: 170078277

Following gene: 170078279

Centisome position: 58.26

GC content: 49.66

Gene sequence:

>1164_bases
TTGGGCCTCAGCAACGATTCGGGAGGTTCATTCATGAACGGCAATTTTCGTGTGGGGAATTTATTTGGCATCCCCTTCTA
CATCAACATTTCTTGGTTCATTGTTCTGGTACTCGTCACCCTGAACTTTGGCGGCGGCCTGTCGTCCCAGTTTCCAGGCC
TCGGCATTAACGCCTTAATTTTAGGATTGGTAGCAGGTTTGCTCCTGTTTGCCTCTGTGTTACTCCACGAGCTGGGTCAC
AGTTATGCAGCAATTCGCCAAGGCATTGGTGTAAACTCCATTACCCTGTTCTTATTCGGGGGACTCGCCAACCTTGATGA
GGAAGCGAAAACGCCCGGTGGTGCATTCTGGATTGCTGTAGCAGGGCCGCTTGTGAGTTTGGCTCTCTTTATCGCACTCT
TTCTCTTAACAGGTAGTGGTGTCCTGAGTGGGCCGCCAGCGGCGATCGCCGGATTGTTGGCTTACATCAACCTAATCTTG
GCCACCTTTAACATGATCCCAGGTCTTCCCCTTGATGGTGGTAATGTCCTTAAATCTATTGTCTGGAAATTAACAGGAAA
TCGTTTTACCGGCACCATCTGGGCTAGCCGTGTTGGTCAGTTTATCGGTTGGACAGCGATTATTCTCGGTGCATTATCTA
TCCTTGGTATTTCTAATGTGGGTAGCTTCTGGACACTAATCATCGGTTGGTTCTTGCTTCAAAACGCGGGTCGTTCTGCC
CAATCTGCCACCATTCAATCGGCCCTCTCTGGCTTAACGGCGGCTGATGCAGTGGTTGAAGATAGTCCGATCATCTCCGC
AGAAACGACGCTACGGGATTTAGCCAACAGTGCCATTCGCTCTGGTAACCAGTGGAAACGCTTCCTAGTCCAGGATGAAA
CAGGTCAACTGCTTGGTGAAGTGCACCTTGATGTTCTTCGTGCAGTGCCTACCAATGACTGGCCCCACAATCAGGTGCGC
GATTTCATCAAATCTGTCCCTGCGGAAAATCAAGTCCAGTCTGATCTATCACTCCTAGACGTGGCCGCTAAATTGGAACA
ACAAGGTTTACAGGCCCTTGCGGTCATCCAGACCAATGGCACCCTCGTGGGACTGCTAGAGAAATCAGCGATTATTCAAC
GGCTGCAAAGTAGTCAACAGGATACAAAAGTTCAGTCTGCTTAA

Upstream 100 bases:

>100_bases
TTCACTACCCAGTAAGTAAAGTAAGCACTTTACATTTTGTTACAATATAAGCAATGAAAGCGGACAAAAAGGTTTTCAAT
AGCGCTAAACGTAAGTCTTT

Downstream 100 bases:

>100_bases
TCTCTAACTCACAATCAAAATCAACTTGGGCGATCGCCTTTTGGAAGCACAAAAGTTCCTGGGGCGATCGCCTGATTCTG
AGGTTTTCCCCAAGAATCCA

Product: sterol-regulatory element binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MGLSNDSGGSFMNGNFRVGNLFGIPFYINISWFIVLVLVTLNFGGGLSSQFPGLGINALILGLVAGLLLFASVLLHELGH
SYAAIRQGIGVNSITLFLFGGLANLDEEAKTPGGAFWIAVAGPLVSLALFIALFLLTGSGVLSGPPAAIAGLLAYINLIL
ATFNMIPGLPLDGGNVLKSIVWKLTGNRFTGTIWASRVGQFIGWTAIILGALSILGISNVGSFWTLIIGWFLLQNAGRSA
QSATIQSALSGLTAADAVVEDSPIISAETTLRDLANSAIRSGNQWKRFLVQDETGQLLGEVHLDVLRAVPTNDWPHNQVR
DFIKSVPAENQVQSDLSLLDVAAKLEQQGLQALAVIQTNGTLVGLLEKSAIIQRLQSSQQDTKVQSA

Sequences:

>Translated_387_residues
MGLSNDSGGSFMNGNFRVGNLFGIPFYINISWFIVLVLVTLNFGGGLSSQFPGLGINALILGLVAGLLLFASVLLHELGH
SYAAIRQGIGVNSITLFLFGGLANLDEEAKTPGGAFWIAVAGPLVSLALFIALFLLTGSGVLSGPPAAIAGLLAYINLIL
ATFNMIPGLPLDGGNVLKSIVWKLTGNRFTGTIWASRVGQFIGWTAIILGALSILGISNVGSFWTLIIGWFLLQNAGRSA
QSATIQSALSGLTAADAVVEDSPIISAETTLRDLANSAIRSGNQWKRFLVQDETGQLLGEVHLDVLRAVPTNDWPHNQVR
DFIKSVPAENQVQSDLSLLDVAAKLEQQGLQALAVIQTNGTLVGLLEKSAIIQRLQSSQQDTKVQSA
>Mature_386_residues
GLSNDSGGSFMNGNFRVGNLFGIPFYINISWFIVLVLVTLNFGGGLSSQFPGLGINALILGLVAGLLLFASVLLHELGHS
YAAIRQGIGVNSITLFLFGGLANLDEEAKTPGGAFWIAVAGPLVSLALFIALFLLTGSGVLSGPPAAIAGLLAYINLILA
TFNMIPGLPLDGGNVLKSIVWKLTGNRFTGTIWASRVGQFIGWTAIILGALSILGISNVGSFWTLIIGWFLLQNAGRSAQ
SATIQSALSGLTAADAVVEDSPIISAETTLRDLANSAIRSGNQWKRFLVQDETGQLLGEVHLDVLRAVPTNDWPHNQVRD
FIKSVPAENQVQSDLSLLDVAAKLEQQGLQALAVIQTNGTLVGLLEKSAIIQRLQSSQQDTKVQSA

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644
- InterPro:   IPR008915
- InterPro:   IPR016483 [H]

Pfam domain/function: PF00571 CBS; PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 40859; Mature: 40728

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLSNDSGGSFMNGNFRVGNLFGIPFYINISWFIVLVLVTLNFGGGLSSQFPGLGINALI
CCCCCCCCCCEECCCEEEEEEECCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
LGLVAGLLLFASVLLHELGHSYAAIRQGIGVNSITLFLFGGLANLDEEAKTPGGAFWIAV
HHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHCCHHCCCHHHCCCCCEEEEEH
AGPLVSLALFIALFLLTGSGVLSGPPAAIAGLLAYINLILATFNMIPGLPLDGGNVLKSI
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
VWKLTGNRFTGTIWASRVGQFIGWTAIILGALSILGISNVGSFWTLIIGWFLLQNAGRSA
HHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCH
QSATIQSALSGLTAADAVVEDSPIISAETTLRDLANSAIRSGNQWKRFLVQDETGQLLGE
HHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHH
VHLDVLRAVPTNDWPHNQVRDFIKSVPAENQVQSDLSLLDVAAKLEQQGLQALAVIQTNG
HHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
TLVGLLEKSAIIQRLQSSQQDTKVQSA
CEEEHHHHHHHHHHHHCCHHHHHCCCC
>Mature Secondary Structure 
GLSNDSGGSFMNGNFRVGNLFGIPFYINISWFIVLVLVTLNFGGGLSSQFPGLGINALI
CCCCCCCCCEECCCEEEEEEECCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
LGLVAGLLLFASVLLHELGHSYAAIRQGIGVNSITLFLFGGLANLDEEAKTPGGAFWIAV
HHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHCCHHCCCHHHCCCCCEEEEEH
AGPLVSLALFIALFLLTGSGVLSGPPAAIAGLLAYINLILATFNMIPGLPLDGGNVLKSI
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
VWKLTGNRFTGTIWASRVGQFIGWTAIILGALSILGISNVGSFWTLIIGWFLLQNAGRSA
HHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCH
QSATIQSALSGLTAADAVVEDSPIISAETTLRDLANSAIRSGNQWKRFLVQDETGQLLGE
HHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHH
VHLDVLRAVPTNDWPHNQVRDFIKSVPAENQVQSDLSLLDVAAKLEQQGLQALAVIQTNG
HHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
TLVGLLEKSAIIQRLQSSQQDTKVQSA
CEEEHHHHHHHHHHHHCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]