| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078277
Identifier: 170078277
GI number: 170078277
Start: 1751875
End: 1752297
Strand: Direct
Name: 170078277
Synonym: SYNPCC7002_A1670
Alternate gene names: NA
Gene position: 1751875-1752297 (Clockwise)
Preceding gene: 170078272
Following gene: 170078278
Centisome position: 58.24
GC content: 37.35
Gene sequence:
>423_bases ATGGAGATAGACAAAGTACTTTATGATCATGACTTTGTGATGTGGATCGAGAAGACTGTTGAACAACTCAAAACCCAAAA TTTCTCGGCATTAGATTTAGAGCATTTAATTGATGAGGTAGAGTCTTTGGGGAAACGGGAAAAGCGAGAGCTGAAAAATC GCTTAATTACTTTGTTTGAGCATCTTTTAAAACGCCACTATGTCCCCATGCCAGAATGTTATCGCGGTTGGGAGGGGAAG ATTCGCAGAACTCAATCAAAACTTAAAGATTTATTAGCAGATTCCCCCAGTTTAAGTAATTTACTCGAAGAAATTTATTT AGACTGTTATCAGGAAGCTGCGGCCAATATGCAACTTGAATATGATGTAGATTTTCCCCAAGATTATCCTTTTCTTAGTC CCTCACAAAACCTATTGAATTAA
Upstream 100 bases:
>100_bases TGAGGCGATCGCCTAATCTCAAGGAATGACTTCACTATTCTATGCGATGCAAATTGGGGTTTGTCGTTATGATGATCAGA GAGGTATTTTGAGGAGATTC
Downstream 100 bases:
>100_bases GTCTAAGCATTGTTGAATTGGGTGACAATTTTGTTTTTGTAGAGGCGATCGCCTTTTTTCAACCAGTGCCATCAAAAGCA AGCAATTCCGAGTGAACCGA
Product: domain of unknown function, putative
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MEIDKVLYDHDFVMWIEKTVEQLKTQNFSALDLEHLIDEVESLGKREKRELKNRLITLFEHLLKRHYVPMPECYRGWEGK IRRTQSKLKDLLADSPSLSNLLEEIYLDCYQEAAANMQLEYDVDFPQDYPFLSPSQNLLN
Sequences:
>Translated_140_residues MEIDKVLYDHDFVMWIEKTVEQLKTQNFSALDLEHLIDEVESLGKREKRELKNRLITLFEHLLKRHYVPMPECYRGWEGK IRRTQSKLKDLLADSPSLSNLLEEIYLDCYQEAAANMQLEYDVDFPQDYPFLSPSQNLLN >Mature_140_residues MEIDKVLYDHDFVMWIEKTVEQLKTQNFSALDLEHLIDEVESLGKREKRELKNRLITLFEHLLKRHYVPMPECYRGWEGK IRRTQSKLKDLLADSPSLSNLLEEIYLDCYQEAAANMQLEYDVDFPQDYPFLSPSQNLLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16681; Mature: 16681
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIDKVLYDHDFVMWIEKTVEQLKTQNFSALDLEHLIDEVESLGKREKRELKNRLITLFE CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLLKRHYVPMPECYRGWEGKIRRTQSKLKDLLADSPSLSNLLEEIYLDCYQEAAANMQLE HHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEE YDVDFPQDYPFLSPSQNLLN ECCCCCCCCCCCCCCHHCCC >Mature Secondary Structure MEIDKVLYDHDFVMWIEKTVEQLKTQNFSALDLEHLIDEVESLGKREKRELKNRLITLFE CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLLKRHYVPMPECYRGWEGKIRRTQSKLKDLLADSPSLSNLLEEIYLDCYQEAAANMQLE HHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEE YDVDFPQDYPFLSPSQNLLN ECCCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA