| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078259
Identifier: 170078259
GI number: 170078259
Start: 1730843
End: 1731247
Strand: Reverse
Name: 170078259
Synonym: SYNPCC7002_A1651
Alternate gene names: NA
Gene position: 1731247-1730843 (Counterclockwise)
Preceding gene: 170078262
Following gene: 170078258
Centisome position: 57.55
GC content: 55.31
Gene sequence:
>405_bases ATGACCCAAGTTTTTACACCAAAACCCATTCAATACGCTCCTGAAACAATACAGCGGGCACTGGTGGCTTTTGCTTGCAC ACCGCTCCGGTGGGAACTGCTGGCAGCGATGAAAGATCAGAGTGTGGCGCTCCCTGATATTGCTGGAGAAGCTGGACTCC GGGCGAGTTATAGTGGGCGATCGCTGCCGGAAGGGGCCGTGGAAGAGTTGATGATGTGGCTGATTCAAGTGGGATTGCTC CGGCGGGAGGTCGATGGTCAAGGTTTGACAGATAGTTTTCGCTTAACGCCTCTGGGTCGTCAGGTGTTGGCCCAATGGCA AGCGGCCCCCCAGGCGGTAAAGGTGTCGTGGTTGGCTCGGTGCCAAAATGCTTTACAACGTTGGCTGAGTCGGTTTTCGG TCTAG
Upstream 100 bases:
>100_bases CTGCCTCGATGATGATTCGCCGTCAAGAACTTTGGGGAAGGATATACAATGCACTTTATTAATGAATTTCGTTTGATTGC AATTGTCTCTGCTCCTAGCC
Downstream 100 bases:
>100_bases ACTGTACAATCTAAATCTATGCATCTATCTTTCGGTTTAATGTGAGGAAGCTTCATGCGGGCGATCGCCATTTTTAGCCC TAGTCGTCGGTCTGGAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MTQVFTPKPIQYAPETIQRALVAFACTPLRWELLAAMKDQSVALPDIAGEAGLRASYSGRSLPEGAVEELMMWLIQVGLL RREVDGQGLTDSFRLTPLGRQVLAQWQAAPQAVKVSWLARCQNALQRWLSRFSV
Sequences:
>Translated_134_residues MTQVFTPKPIQYAPETIQRALVAFACTPLRWELLAAMKDQSVALPDIAGEAGLRASYSGRSLPEGAVEELMMWLIQVGLL RREVDGQGLTDSFRLTPLGRQVLAQWQAAPQAVKVSWLARCQNALQRWLSRFSV >Mature_133_residues TQVFTPKPIQYAPETIQRALVAFACTPLRWELLAAMKDQSVALPDIAGEAGLRASYSGRSLPEGAVEELMMWLIQVGLLR REVDGQGLTDSFRLTPLGRQVLAQWQAAPQAVKVSWLARCQNALQRWLSRFSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14940; Mature: 14808
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQVFTPKPIQYAPETIQRALVAFACTPLRWELLAAMKDQSVALPDIAGEAGLRASYSGR CCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC SLPEGAVEELMMWLIQVGLLRREVDGQGLTDSFRLTPLGRQVLAQWQAAPQAVKVSWLAR CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH CQNALQRWLSRFSV HHHHHHHHHHHHCC >Mature Secondary Structure TQVFTPKPIQYAPETIQRALVAFACTPLRWELLAAMKDQSVALPDIAGEAGLRASYSGR CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC SLPEGAVEELMMWLIQVGLLRREVDGQGLTDSFRLTPLGRQVLAQWQAAPQAVKVSWLAR CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH CQNALQRWLSRFSV HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA