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The map label for this gene is degQ [H]

Identifier: 170078262

GI number: 170078262

Start: 1734266

End: 1735465

Strand: Reverse

Name: degQ [H]

Synonym: SYNPCC7002_A1654

Alternate gene names: 170078262

Gene position: 1735465-1734266 (Counterclockwise)

Preceding gene: 170078263

Following gene: 170078259

Centisome position: 57.69

GC content: 54.33

Gene sequence:

>1200_bases
ATGAGACGATCAAAATTTGTCCAACGATTTACAACCCACATTGTTGCCCTCTGTGTGGGCTGTGCCATTACCTTCGGGGC
AATGCAAGGCTCTAGCCAAACCCTCAACCAACCTTTAGCTGATACCAATCCGCCCCAGGAAGTGGCAGCGGTACCCGTAG
CAGCAGGTCGAAGTTTTGTCGCCGATGCGGTGGCCAGGACAGGGCAAGCGGTAGTGCGTCTAGACACAGAAAAAACCGTG
GTGCGCCGCTTCCAGGACCCGTTTATGAATGATCCATTTTTCCGGGAGTTTTTTGGCGATCGCTTTGGGATGCAATTTCC
CGATGAACAACGTCAGGTGCTCACCGGACAAGGATCTGGGTTTATTACAGATCGGTCTGGGGTGATCCTCACCAACGCCC
ATGTTGTGAGCGGTGCTGATCGAGTTACCGTAACGCTAAAAGATGGCCGCAGCTTTGAAGGGGAAGTAAAGGGTACCGAC
GAAGTAACTGATTTGGCCGTCGTGAAAATTGACCCCAAAAATGAGTCTATTCCCGTGGCTCCCCTCGGTGATTCTGGGTC
TGTGCAGGTGGGTGACTGGGCGATCGCCGTAGGGAATCCGGTGGGTTTAAACAATACTGTTACCCTCGGCATTATCAGTA
CCCTAGAACGGTCTTCGGCCCAGGCAGGAATTCCCGATAAGCGGGTCGATTTTCTCCAGACCGATGCCGCCATTAACCCT
GGTAACTCCGGTGGCCCCCTCCTCAACGCCGACGGTGAAGTGATTGGGATTAACACCGCGATCCGCCGGGATGCCATGGG
CATTGGATTTGCGATCCCGATCAACAAAGCCAAGGATCTTGAACCCACCCTCGCCGCTGGGAAAGAAGTACCCCATCCCT
TCATCGGGATTCGGATGGTGAGCCTCACCCCAGAAATGGCCAAGGAAAATAATGCTGACCCCAATTCCATCGTGCTCTTA
CCGGAAGTGAACGGAGCGCTGGTGCTGGGTGTGGTGCCGGGTAGTCCAGCGGAAACAGCGGGTCTGCGTCGGGGCGATGT
GATTACAAAAATCAACGGTAAGGCGATCGCCAATGCCCAACAACTCCAGGAAACCGTTGAACAGAGTGGCGTTGATGCTA
GCTTGAAGGTGGAACTGCGCCGGGGCGATCGCACCTCAGAGCTCACCTTGAGAACAGCACAAATGCAAGGGGTTTCATAA

Upstream 100 bases:

>100_bases
GCTAAGATTGACGATAAAACCTCCTGCGGTGTCCCCCTAACGCCCGGCTCGATGTGGCCATCATCCTAAAACTTTATACA
GACTGGATAGAAAAACTTCT

Downstream 100 bases:

>100_bases
GTTCTTTAAGTTGAAATTTCCCCCAAGGTCTCCGGGTTCACAACCTGGGGACTTTTTTTGCGTTCTAGCCCAAGGATTCA
CCGACAGTTAGGCGCATCCC

Product: trypsin-like serine protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MRRSKFVQRFTTHIVALCVGCAITFGAMQGSSQTLNQPLADTNPPQEVAAVPVAAGRSFVADAVARTGQAVVRLDTEKTV
VRRFQDPFMNDPFFREFFGDRFGMQFPDEQRQVLTGQGSGFITDRSGVILTNAHVVSGADRVTVTLKDGRSFEGEVKGTD
EVTDLAVVKIDPKNESIPVAPLGDSGSVQVGDWAIAVGNPVGLNNTVTLGIISTLERSSAQAGIPDKRVDFLQTDAAINP
GNSGGPLLNADGEVIGINTAIRRDAMGIGFAIPINKAKDLEPTLAAGKEVPHPFIGIRMVSLTPEMAKENNADPNSIVLL
PEVNGALVLGVVPGSPAETAGLRRGDVITKINGKAIANAQQLQETVEQSGVDASLKVELRRGDRTSELTLRTAQMQGVS

Sequences:

>Translated_399_residues
MRRSKFVQRFTTHIVALCVGCAITFGAMQGSSQTLNQPLADTNPPQEVAAVPVAAGRSFVADAVARTGQAVVRLDTEKTV
VRRFQDPFMNDPFFREFFGDRFGMQFPDEQRQVLTGQGSGFITDRSGVILTNAHVVSGADRVTVTLKDGRSFEGEVKGTD
EVTDLAVVKIDPKNESIPVAPLGDSGSVQVGDWAIAVGNPVGLNNTVTLGIISTLERSSAQAGIPDKRVDFLQTDAAINP
GNSGGPLLNADGEVIGINTAIRRDAMGIGFAIPINKAKDLEPTLAAGKEVPHPFIGIRMVSLTPEMAKENNADPNSIVLL
PEVNGALVLGVVPGSPAETAGLRRGDVITKINGKAIANAQQLQETVEQSGVDASLKVELRRGDRTSELTLRTAQMQGVS
>Mature_399_residues
MRRSKFVQRFTTHIVALCVGCAITFGAMQGSSQTLNQPLADTNPPQEVAAVPVAAGRSFVADAVARTGQAVVRLDTEKTV
VRRFQDPFMNDPFFREFFGDRFGMQFPDEQRQVLTGQGSGFITDRSGVILTNAHVVSGADRVTVTLKDGRSFEGEVKGTD
EVTDLAVVKIDPKNESIPVAPLGDSGSVQVGDWAIAVGNPVGLNNTVTLGIISTLERSSAQAGIPDKRVDFLQTDAAINP
GNSGGPLLNADGEVIGINTAIRRDAMGIGFAIPINKAKDLEPTLAAGKEVPHPFIGIRMVSLTPEMAKENNADPNSIVLL
PEVNGALVLGVVPGSPAETAGLRRGDVITKINGKAIANAQQLQETVEQSGVDASLKVELRRGDRTSELTLRTAQMQGVS

Specific function: A putative protease, its function overlaps that of the related putative proteases HhoB and HtrA [H]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Homo sapiens, GI4506141, Length=339, Percent_Identity=38.0530973451327, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI22129776, Length=336, Percent_Identity=38.3928571428571, Blast_Score=202, Evalue=3e-52,
Organism=Homo sapiens, GI7019477, Length=341, Percent_Identity=36.6568914956012, Blast_Score=178, Evalue=7e-45,
Organism=Homo sapiens, GI24308541, Length=287, Percent_Identity=37.9790940766551, Blast_Score=171, Evalue=1e-42,
Organism=Escherichia coli, GI1789629, Length=299, Percent_Identity=38.7959866220736, Blast_Score=187, Evalue=7e-49,
Organism=Escherichia coli, GI1786356, Length=282, Percent_Identity=40.7801418439716, Blast_Score=175, Evalue=4e-45,
Organism=Escherichia coli, GI1789630, Length=280, Percent_Identity=36.7857142857143, Blast_Score=148, Evalue=6e-37,
Organism=Saccharomyces cerevisiae, GI6324206, Length=318, Percent_Identity=24.5283018867925, Blast_Score=64, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24646839, Length=346, Percent_Identity=35.2601156069364, Blast_Score=189, Evalue=3e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR009003
- InterPro:   IPR001254
- InterPro:   IPR001940 [H]

Pfam domain/function: PF00595 PDZ; PF00089 Trypsin [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 42232; Mature: 42232

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSKFVQRFTTHIVALCVGCAITFGAMQGSSQTLNQPLADTNPPQEVAAVPVAAGRSFV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHEEEEHHCCHHHH
ADAVARTGQAVVRLDTEKTVVRRFQDPFMNDPFFREFFGDRFGMQFPDEQRQVLTGQGSG
HHHHHHCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHEEECCCCE
FITDRSGVILTNAHVVSGADRVTVTLKDGRSFEGEVKGTDEVTDLAVVKIDPKNESIPVA
EEECCCCEEEEECEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEE
PLGDSGSVQVGDWAIAVGNPVGLNNTVTLGIISTLERSSAQAGIPDKRVDFLQTDAAINP
ECCCCCCEEECCEEEEECCCCCCCCEEEEEEHHHHHHCCCCCCCCHHHHHHEECCCCCCC
GNSGGPLLNADGEVIGINTAIRRDAMGIGFAIPINKAKDLEPTLAAGKEVPHPFIGIRMV
CCCCCCEEECCCCEEEECHHHHHCCCCCEEEEECCCCCCCCHHHHCCCCCCCCEEEEEEE
SLTPEMAKENNADPNSIVLLPEVNGALVLGVVPGSPAETAGLRRGDVITKINGKAIANAQ
EECHHHHHCCCCCCCEEEEEEECCCEEEEEEECCCCCHHCCCCCCCEEEEECCCHHCCHH
QLQETVEQSGVDASLKVELRRGDRTSELTLRTAQMQGVS
HHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEECCCCC
>Mature Secondary Structure
MRRSKFVQRFTTHIVALCVGCAITFGAMQGSSQTLNQPLADTNPPQEVAAVPVAAGRSFV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHEEEEHHCCHHHH
ADAVARTGQAVVRLDTEKTVVRRFQDPFMNDPFFREFFGDRFGMQFPDEQRQVLTGQGSG
HHHHHHCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHEEECCCCE
FITDRSGVILTNAHVVSGADRVTVTLKDGRSFEGEVKGTDEVTDLAVVKIDPKNESIPVA
EEECCCCEEEEECEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEE
PLGDSGSVQVGDWAIAVGNPVGLNNTVTLGIISTLERSSAQAGIPDKRVDFLQTDAAINP
ECCCCCCEEECCEEEEECCCCCCCCEEEEEEHHHHHHCCCCCCCCHHHHHHEECCCCCCC
GNSGGPLLNADGEVIGINTAIRRDAMGIGFAIPINKAKDLEPTLAAGKEVPHPFIGIRMV
CCCCCCEEECCCCEEEECHHHHHCCCCCEEEEECCCCCCCCHHHHCCCCCCCCEEEEEEE
SLTPEMAKENNADPNSIVLLPEVNGALVLGVVPGSPAETAGLRRGDVITKINGKAIANAQ
EECHHHHHCCCCCCCEEEEEEECCCEEEEEEECCCCCHHCCCCCCCEEEEECCCHHCCHH
QLQETVEQSGVDASLKVELRRGDRTSELTLRTAQMQGVS
HHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]