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The map label for this gene is yebC [C]

Identifier: 170078248

GI number: 170078248

Start: 1720237

End: 1720989

Strand: Direct

Name: yebC [C]

Synonym: SYNPCC7002_A1640

Alternate gene names: 170078248

Gene position: 1720237-1720989 (Clockwise)

Preceding gene: 170078245

Following gene: 170078249

Centisome position: 57.19

GC content: 52.19

Gene sequence:

>753_bases
ATGGCTGGACATAGTAAGTGGGCAAATATTAAACGACAAAAGGCACGGGTTGATGCCAAGAAGGGGAAAACGTTTACTCA
GTTATCCCGGGCGATCATTGTTGCGGCTCGCCATGGTCTCCCTGATCCGGCGGGGAATTTTCAACTCCGTACTGCCATTG
AAAAAGCGAAGGCTGCGGGCATCCCCAATGAAAATATCGAACGGGCGATCGCCAAGGGAGCGGGTACCTATAATGATGGC
GAAGCCAATTACGAAGAAATCCGTTACGAAGGCTATGGGGCCGGGGGCGTGGCCATTTTGATCGAAGCCCTCACCGACAA
CCGCAACCGCACAGCGGCGGATTTACGTTCTGCCTTTAGCAAAAATGGTGGCAATTTGGGAGAAACGGGTTGTGTGAGCT
GGATGTTTAGCCACAAAGGTGTGGTGACGCTCACGGGGGAGATCGACGAAGAAGCCCTACTAGAAGCTTCCTTAATTGGC
GAAGCAGAAGGTTATAGTGCCATCGAAGACAGCGATGAGGTGGAAGTCCTCAGTGCCGTTGAGAACCTAGAACACCTCAA
CCAAACCTTGCAGGATGCGGGCTTTACGGTGAAAGAGGCGGAGTTGCGCTGGTTCCCGGAGACAGAAATGAACCTCACCG
ACGAAGTACAGATCCAAACGATCCTCAAAATGATCGAAACGATCGAAGCCCTTGATGATGTGCAAACGGTCACCAGTAAT
TTGGCGATCGCCCCAGCCTTTGCGACCCTCTAA

Upstream 100 bases:

>100_bases
AGGTAAAGTTTTACTGACAGGTTCAAAATCTGCTGTGTATTGGTGGCCTGTTATGGTTTAAGAAGAAAGCAACAGTGATG
ATTTGATTTGAGCATTCACC

Downstream 100 bases:

>100_bases
AGGTCATTTAAAAATTGAGCCAAAGTGATCCCCTAGCGACAGAGACTTGATTTGAAGGCTCCTTTGAGGTTTCAGGGGCG
CACAAAATATTTCTAGTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MAGHSKWANIKRQKARVDAKKGKTFTQLSRAIIVAARHGLPDPAGNFQLRTAIEKAKAAGIPNENIERAIAKGAGTYNDG
EANYEEIRYEGYGAGGVAILIEALTDNRNRTAADLRSAFSKNGGNLGETGCVSWMFSHKGVVTLTGEIDEEALLEASLIG
EAEGYSAIEDSDEVEVLSAVENLEHLNQTLQDAGFTVKEAELRWFPETEMNLTDEVQIQTILKMIETIEALDDVQTVTSN
LAIAPAFATL

Sequences:

>Translated_250_residues
MAGHSKWANIKRQKARVDAKKGKTFTQLSRAIIVAARHGLPDPAGNFQLRTAIEKAKAAGIPNENIERAIAKGAGTYNDG
EANYEEIRYEGYGAGGVAILIEALTDNRNRTAADLRSAFSKNGGNLGETGCVSWMFSHKGVVTLTGEIDEEALLEASLIG
EAEGYSAIEDSDEVEVLSAVENLEHLNQTLQDAGFTVKEAELRWFPETEMNLTDEVQIQTILKMIETIEALDDVQTVTSN
LAIAPAFATL
>Mature_249_residues
AGHSKWANIKRQKARVDAKKGKTFTQLSRAIIVAARHGLPDPAGNFQLRTAIEKAKAAGIPNENIERAIAKGAGTYNDGE
ANYEEIRYEGYGAGGVAILIEALTDNRNRTAADLRSAFSKNGGNLGETGCVSWMFSHKGVVTLTGEIDEEALLEASLIGE
AEGYSAIEDSDEVEVLSAVENLEHLNQTLQDAGFTVKEAELRWFPETEMNLTDEVQIQTILKMIETIEALDDVQTVTSNL
AIAPAFATL

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=251, Percent_Identity=27.0916334661355, Blast_Score=97, Evalue=1e-20,
Organism=Escherichia coli, GI1788171, Length=248, Percent_Identity=42.741935483871, Blast_Score=192, Evalue=1e-50,
Organism=Escherichia coli, GI1788294, Length=238, Percent_Identity=34.453781512605, Blast_Score=133, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI17556100, Length=242, Percent_Identity=26.0330578512397, Blast_Score=69, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6321458, Length=265, Percent_Identity=32.8301886792453, Blast_Score=111, Evalue=8e-26,
Organism=Drosophila melanogaster, GI24583305, Length=251, Percent_Identity=29.0836653386454, Blast_Score=78, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1640_SYNP2 (B1XP37)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001734886.1
- ProteinModelPortal:   B1XP37
- SMR:   B1XP37
- GeneID:   6055353
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A1640
- HOGENOM:   HBG715231
- OMA:   GCVAYLF
- ProtClustDB:   PRK00110
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 27054; Mature: 26922

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANIKRQKARVDAKKGKTFTQLSRAIIVAARHGLPDPAGNFQLRTAIEKAKAAG
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
IPNENIERAIAKGAGTYNDGEANYEEIRYEGYGAGGVAILIEALTDNRNRTAADLRSAFS
CCCHHHHHHHHHCCCCCCCCCCCHHHHEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
KNGGNLGETGCVSWMFSHKGVVTLTGEIDEEALLEASLIGEAEGYSAIEDSDEVEVLSAV
CCCCCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
ENLEHLNQTLQDAGFTVKEAELRWFPETEMNLTDEVQIQTILKMIETIEALDDVQTVTSN
HHHHHHHHHHHHCCCEEEECCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
LAIAPAFATL
CEECCHHHCC
>Mature Secondary Structure 
AGHSKWANIKRQKARVDAKKGKTFTQLSRAIIVAARHGLPDPAGNFQLRTAIEKAKAAG
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
IPNENIERAIAKGAGTYNDGEANYEEIRYEGYGAGGVAILIEALTDNRNRTAADLRSAFS
CCCHHHHHHHHHCCCCCCCCCCCHHHHEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
KNGGNLGETGCVSWMFSHKGVVTLTGEIDEEALLEASLIGEAEGYSAIEDSDEVEVLSAV
CCCCCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
ENLEHLNQTLQDAGFTVKEAELRWFPETEMNLTDEVQIQTILKMIETIEALDDVQTVTSN
HHHHHHHHHHHHCCCEEEECCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
LAIAPAFATL
CEECCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA